RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 SGO2Q562F6 1265 aa14.29□□□□□ -0.12
VMP1-217ENST00000593168 ZNF569Q5MCW4 686 aa14.29□□□□□ -0.12
VMP1-217ENST00000593168 CD300LGQ6UXG3 332 aa14.29□□□□□ -0.12
VMP1-217ENST00000593168 DSTYKQ6XUX3 929 aa14.29□□□□□ -0.12
VMP1-217ENST00000593168 SYT10Q6XYQ8 523 aa14.29□□□□□ -0.12
VMP1-217ENST00000593168 COLGALT2Q8IYK4 626 aa14.29□□□□□ -0.12
VMP1-217ENST00000593168 CRYBG2Q8N1P7 616 aa14.29□□□□□ -0.12
VMP1-217ENST00000593168 C3orf58Q8NDZ4 430 aa14.29□□□□□ -0.12
VMP1-217ENST00000593168 OR6B3Q8NGW1 331 aa14.29□□□□□ -0.12
VMP1-217ENST00000593168 CTNNBL1Q8WYA6 563 aaPredicted RBP14.29□□□□□ -0.12
VMP1-217ENST00000593168 CYFIP2Q96F07 1278 aa14.29□□□□□ -0.12
VMP1-217ENST00000593168 VCPIP1Q96JH7 1222 aa14.29□□□□□ -0.12
VMP1-217ENST00000593168 CALR3Q96L12 384 aaKnown RBP14.29□□□□□ -0.12
VMP1-217ENST00000593168 HEXIM2Q96MH2 286 aaKnown RBP14.29□□□□□ -0.12
VMP1-217ENST00000593168 CASD1Q96PB1 797 aa14.29□□□□□ -0.12
VMP1-217ENST00000593168 NOX5Q96PH1 765 aa14.29□□□□□ -0.12
VMP1-217ENST00000593168 FAM193BQ96PV7 902 aaPredicted RBP14.29□□□□□ -0.12
VMP1-217ENST00000593168 PAAF1Q9BRP4 392 aa14.29□□□□□ -0.12
VMP1-217ENST00000593168 SNX25Q9H3E2 840 aa14.29□□□□□ -0.12
VMP1-217ENST00000593168 CACNG4Q9UBN1 327 aa14.29□□□□□ -0.12
VMP1-217ENST00000593168 HMGXB4Q9UGU5 601 aa14.29□□□□□ -0.12
VMP1-217ENST00000593168 NME7Q9Y5B8 376 aa14.29□□□□□ -0.12
VMP1-217ENST00000593168 COL4A6Q14031 1691 aa14.29□□□□□ -0.12
VMP1-217ENST00000593168 MACROD2A1Z1Q3 448 aa14.28□□□□□ -0.12
VMP1-217ENST00000593168 A8MXQ7 604 aa14.28□□□□□ -0.12
VMP1-217ENST00000593168 TMEM189-UBE2V1I3L0A0 370 aa14.28□□□□□ -0.12
VMP1-217ENST00000593168 NCANO14594 1321 aa14.28□□□□□ -0.12
VMP1-217ENST00000593168 B3GAT3O94766 335 aa14.28□□□□□ -0.12
VMP1-217ENST00000593168 CFHP08603 1231 aa14.28□□□□□ -0.12
VMP1-217ENST00000593168 MYBL1P10243 752 aa14.28□□□□□ -0.12
VMP1-217ENST00000593168 IGFBP6P24592 240 aaPredicted RBP14.28□□□□□ -0.12
VMP1-217ENST00000593168 LHX1P48742 406 aa14.28□□□□□ -0.12
VMP1-217ENST00000593168 NOMO3P69849 1222 aa14.28□□□□□ -0.12
VMP1-217ENST00000593168 PUS10Q3MIT2 529 aaKnown RBP14.28□□□□□ -0.12
VMP1-217ENST00000593168 TIGD5Q53EQ6 642 aa14.28□□□□□ -0.12
VMP1-217ENST00000593168 TCEAL5Q5H9L2 206 aa14.28□□□□□ -0.12
VMP1-217ENST00000593168 WDFY4Q6ZS81 3184 aa14.28□□□□□ -0.12
VMP1-217ENST00000593168 ZNF280BQ86YH2 543 aa14.28□□□□□ -0.12
VMP1-217ENST00000593168 PHF13Q86YI8 300 aaPredicted RBP14.28□□□□□ -0.12
VMP1-217ENST00000593168 ADGRF2Q8IZF7 708 aa14.28□□□□□ -0.12
VMP1-217ENST00000593168 PDCL2Q8N4E4 241 aa14.28□□□□□ -0.12
VMP1-217ENST00000593168 TMEM35BQ8NCS4 154 aa14.28□□□□□ -0.12
VMP1-217ENST00000593168 TRIM58Q8NG06 486 aa14.28□□□□□ -0.12
VMP1-217ENST00000593168 TRIM11Q96F44 468 aa14.28□□□□□ -0.12
VMP1-217ENST00000593168 MRPL9Q9BYD2 267 aaKnown RBP14.28□□□□□ -0.12
VMP1-217ENST00000593168 DNAI1Q9UI46 699 aa14.28□□□□□ -0.12
VMP1-217ENST00000593168 SALL4Q9UJQ4 1053 aa14.28□□□□□ -0.12
VMP1-217ENST00000593168 CEP83Q9Y592 693 aa14.28□□□□□ -0.12
VMP1-217ENST00000593168 PAXBP1Q9Y5B6 917 aa14.28□□□□□ -0.12
VMP1-217ENST00000593168 H3BNC9 293 aa14.27□□□□□ -0.13
VMP1-217ENST00000593168 M0QZQ0 153 aa14.27□□□□□ -0.13
VMP1-217ENST00000593168 O00370 1275 aa14.27□□□□□ -0.13
VMP1-217ENST00000593168 DCXO43602 365 aa14.27□□□□□ -0.13
VMP1-217ENST00000593168 ABCB4P21439 1286 aa14.27□□□□□ -0.13
VMP1-217ENST00000593168 NSFP46459 744 aaKnown RBP14.27□□□□□ -0.13
VMP1-217ENST00000593168 RNASELQ05823 741 aaKnown RBP14.27□□□□□ -0.13
VMP1-217ENST00000593168 GPM6BQ13491 265 aa14.27□□□□□ -0.13
VMP1-217ENST00000593168 PTPROQ16827 1216 aa14.27□□□□□ -0.13
VMP1-217ENST00000593168 NAA35Q5VZE5 725 aa14.27□□□□□ -0.13
VMP1-217ENST00000593168 WSCD1Q658N2 575 aa14.27□□□□□ -0.13
VMP1-217ENST00000593168 ARHGAP17Q68EM7 881 aa14.27□□□□□ -0.13
VMP1-217ENST00000593168 LCLAT1Q6UWP7 414 aa14.27□□□□□ -0.13
VMP1-217ENST00000593168 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.27□□□□□ -0.13
VMP1-217ENST00000593168 DNAAF5Q86Y56 855 aa14.27□□□□□ -0.13
VMP1-217ENST00000593168 RHOT2Q8IXI1 618 aa14.27□□□□□ -0.13
VMP1-217ENST00000593168 MCOLN2Q8IZK6 566 aa14.27□□□□□ -0.13
VMP1-217ENST00000593168 SLC35F6Q8N357 371 aa14.27□□□□□ -0.13
VMP1-217ENST00000593168 RFFLQ8WZ73 363 aa14.27□□□□□ -0.13
VMP1-217ENST00000593168 TNIP3Q96KP6 325 aa14.27□□□□□ -0.13
VMP1-217ENST00000593168 ALS2CR12Q96Q35 445 aa14.27□□□□□ -0.13
VMP1-217ENST00000593168 WDR24Q96S15 920 aa14.27□□□□□ -0.13
VMP1-217ENST00000593168 THAP2Q9H0W7 228 aa14.27□□□□□ -0.13
VMP1-217ENST00000593168 AVENQ9NQS1 362 aaPredicted RBP14.27□□□□□ -0.13
VMP1-217ENST00000593168 GTF3C4Q9UKN8 822 aa14.27□□□□□ -0.13
VMP1-217ENST00000593168 DSEQ9UL01 958 aa14.27□□□□□ -0.13
VMP1-217ENST00000593168 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.27□□□□□ -0.13
VMP1-217ENST00000593168 C5orf42Q9H799 3197 aa14.27□□□□□ -0.13
VMP1-217ENST00000593168 UPP2O95045 317 aa14.26□□□□□ -0.13
VMP1-217ENST00000593168 MOCS3O95396 460 aa14.26□□□□□ -0.13
VMP1-217ENST00000593168 CYP11A1P05108 521 aa14.26□□□□□ -0.13
VMP1-217ENST00000593168 CYP1A2P05177 515 aa14.26□□□□□ -0.13
VMP1-217ENST00000593168 ODC1P11926 461 aa14.26□□□□□ -0.13
VMP1-217ENST00000593168 TYMPP19971 482 aa14.26□□□□□ -0.13
VMP1-217ENST00000593168 LMO2P25791 158 aa14.26□□□□□ -0.13
VMP1-217ENST00000593168 CASQ1P31415 396 aa14.26□□□□□ -0.13
VMP1-217ENST00000593168 NOP2P46087 812 aaKnown RBP14.26□□□□□ -0.13
VMP1-217ENST00000593168 HADHBP55084 474 aaKnown RBP14.26□□□□□ -0.13
VMP1-217ENST00000593168 NAP1L1P55209 391 aaKnown RBP14.26□□□□□ -0.13
VMP1-217ENST00000593168 NHLH1Q02575 133 aa14.26□□□□□ -0.13
VMP1-217ENST00000593168 ZP2Q05996 745 aa14.26□□□□□ -0.13
VMP1-217ENST00000593168 C1QBPQ07021 282 aaKnown RBP14.26□□□□□ -0.13
VMP1-217ENST00000593168 ORC1Q13415 861 aa14.26□□□□□ -0.13
VMP1-217ENST00000593168 COL19A1Q14993 1142 aa14.26□□□□□ -0.13
VMP1-217ENST00000593168 EP400NLQ6ZTU2 488 aa14.26□□□□□ -0.13
VMP1-217ENST00000593168 ACOT1Q86TX2 421 aa14.26□□□□□ -0.13
VMP1-217ENST00000593168 OSTM1Q86WC4 334 aa14.26□□□□□ -0.13
VMP1-217ENST00000593168 METTL23Q86XA0 190 aa14.26□□□□□ -0.13
VMP1-217ENST00000593168 WDTC1Q8N5D0 677 aa14.26□□□□□ -0.13
VMP1-217ENST00000593168 SLC35G2Q8TBE7 412 aa14.26□□□□□ -0.13
VMP1-217ENST00000593168 CPA5Q8WXQ8 436 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms