RNA–Protein interactions for RNA: ENST00000592619.5

VMP1-215, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-215ENST00000592619 SP8Q8IXZ3 490 aa7.41□□□□□ -1.22
VMP1-215ENST00000592619 TLR10Q9BXR5 811 aa7.41□□□□□ -1.22
VMP1-215ENST00000592619 REXO4Q9GZR2 422 aaKnown RBP7.41□□□□□ -1.22
VMP1-215ENST00000592619 HEYLQ9NQ87 328 aaPredicted RBP7.41□□□□□ -1.22
VMP1-215ENST00000592619 ZSCAN32Q9NX65 697 aa7.41□□□□□ -1.22
VMP1-215ENST00000592619 SAGE1Q9NXZ1 904 aa7.41□□□□□ -1.22
VMP1-215ENST00000592619 DKK4Q9UBT3 224 aa7.41□□□□□ -1.22
VMP1-215ENST00000592619 RPS6KL1Q9Y6S9 549 aa7.41□□□□□ -1.22
VMP1-215ENST00000592619 TRIM13O60858 407 aa7.4□□□□□ -1.22
VMP1-215ENST00000592619 RAD17O75943 681 aa7.4□□□□□ -1.22
VMP1-215ENST00000592619 FCER1AP12319 257 aa7.4□□□□□ -1.22
VMP1-215ENST00000592619 CPT1AP50416 773 aa7.4□□□□□ -1.22
VMP1-215ENST00000592619 TOB1P50616 345 aaPredicted RBP7.4□□□□□ -1.22
VMP1-215ENST00000592619 ITGA8P53708 1063 aa7.4□□□□□ -1.22
VMP1-215ENST00000592619 ARL4CP56559 192 aa7.4□□□□□ -1.22
VMP1-215ENST00000592619 FOXL1Q12952 345 aa7.4□□□□□ -1.22
VMP1-215ENST00000592619 MYBPC2Q14324 1141 aa7.4□□□□□ -1.22
VMP1-215ENST00000592619 IQCB1Q15051 598 aa7.4□□□□□ -1.22
VMP1-215ENST00000592619 PLA1AQ53H76 456 aa7.4□□□□□ -1.22
VMP1-215ENST00000592619 METRNLQ641Q3 311 aa7.4□□□□□ -1.22
VMP1-215ENST00000592619 NAIF1Q69YI7 327 aaPredicted RBP7.4□□□□□ -1.22
VMP1-215ENST00000592619 FCRL6Q6DN72 434 aa7.4□□□□□ -1.22
VMP1-215ENST00000592619 SYT12Q8IV01 421 aa7.4□□□□□ -1.22
VMP1-215ENST00000592619 PAF1Q8N7H5 531 aa7.4□□□□□ -1.22
VMP1-215ENST00000592619 RAPGEF4Q8WZA2 1011 aa7.4□□□□□ -1.22
VMP1-215ENST00000592619 EID2BQ96D98 161 aa7.4□□□□□ -1.22
VMP1-215ENST00000592619 OR14A2Q96R54 314 aa7.4□□□□□ -1.22
VMP1-215ENST00000592619 SMOQ99835 787 aa7.4□□□□□ -1.22
VMP1-215ENST00000592619 FAM83DQ9H4H8 585 aa7.4□□□□□ -1.22
VMP1-215ENST00000592619 MRPS18AQ9NVS2 196 aaKnown RBP7.4□□□□□ -1.22
VMP1-215ENST00000592619 LRFN1Q9P244 771 aa7.4□□□□□ -1.22
VMP1-215ENST00000592619 IGSF9Q9P2J2 1179 aa7.4□□□□□ -1.22
VMP1-215ENST00000592619 LZTS1Q9Y250 596 aa7.4□□□□□ -1.22
VMP1-215ENST00000592619 ADCY10Q96PN6 1610 aa7.39□□□□□ -1.23
VMP1-215ENST00000592619 M0R3H8 397 aa7.39□□□□□ -1.23
VMP1-215ENST00000592619 POLRMTO00411 1230 aaKnown RBP7.39□□□□□ -1.23
VMP1-215ENST00000592619 ITGA5P08648 1049 aa7.39□□□□□ -1.23
VMP1-215ENST00000592619 ATXN1LP0C7T5 689 aaKnown RBP7.39□□□□□ -1.23
VMP1-215ENST00000592619 JAG1P78504 1218 aa7.39□□□□□ -1.23
VMP1-215ENST00000592619 ZNF844Q08AG5 666 aa7.39□□□□□ -1.23
VMP1-215ENST00000592619 FOXD4Q12950 439 aaPredicted RBP7.39□□□□□ -1.23
VMP1-215ENST00000592619 PRKG1Q13976 671 aa7.39□□□□□ -1.23
VMP1-215ENST00000592619 PKN1Q16512 942 aa7.39□□□□□ -1.23
VMP1-215ENST00000592619 MAPKAPK3Q16644 382 aa7.39□□□□□ -1.23
VMP1-215ENST00000592619 AGAP9Q5VTM2 703 aa7.39□□□□□ -1.23
VMP1-215ENST00000592619 PLAG1Q6DJT9 500 aa7.39□□□□□ -1.23
VMP1-215ENST00000592619 TANGO2Q6ICL3 276 aa7.39□□□□□ -1.23
VMP1-215ENST00000592619 RHOT2Q8IXI1 618 aa7.39□□□□□ -1.23
VMP1-215ENST00000592619 ANKRD35Q8N283 1001 aa7.39□□□□□ -1.23
VMP1-215ENST00000592619 POC1BQ8TC44 478 aa7.39□□□□□ -1.23
VMP1-215ENST00000592619 SMCR8Q8TEV9 937 aaPredicted RBP7.39□□□□□ -1.23
VMP1-215ENST00000592619 MIEF2Q96C03 454 aa7.39□□□□□ -1.23
VMP1-215ENST00000592619 TBATAQ96M53 351 aa7.39□□□□□ -1.23
VMP1-215ENST00000592619 GNRHR2Q96P88 292 aa7.39□□□□□ -1.23
VMP1-215ENST00000592619 PNKPQ96T60 521 aa7.39□□□□□ -1.23
VMP1-215ENST00000592619 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.39□□□□□ -1.23
VMP1-215ENST00000592619 C9orf78Q9NZ63 289 aaPredicted RBP7.39□□□□□ -1.23
VMP1-215ENST00000592619 SHOC2Q9UQ13 582 aa7.39□□□□□ -1.23
VMP1-215ENST00000592619 UHRF1BP1LA0JNW5 1464 aa7.38□□□□□ -1.23
VMP1-215ENST00000592619 PTPRGP23470 1445 aa7.38□□□□□ -1.23
VMP1-215ENST00000592619 RAB27BO00194 218 aa7.38□□□□□ -1.23
VMP1-215ENST00000592619 DCLK1O15075 740 aa7.38□□□□□ -1.23
VMP1-215ENST00000592619 EGR1P18146 543 aa7.38□□□□□ -1.23
VMP1-215ENST00000592619 MSX2P35548 267 aaPredicted RBP7.38□□□□□ -1.23
VMP1-215ENST00000592619 BOP1Q14137 746 aaKnown RBP7.38□□□□□ -1.23
VMP1-215ENST00000592619 POSTNQ15063 836 aa7.38□□□□□ -1.23
VMP1-215ENST00000592619 FAM102AQ5T9C2 384 aaPredicted RBP7.38□□□□□ -1.23
VMP1-215ENST00000592619 WDR78Q5VTH9 848 aa7.38□□□□□ -1.23
VMP1-215ENST00000592619 RFX8Q6ZV50 586 aa7.38□□□□□ -1.23
VMP1-215ENST00000592619 HTR3DQ70Z44 454 aa7.38□□□□□ -1.23
VMP1-215ENST00000592619 GALNT15Q8N3T1 639 aa7.38□□□□□ -1.23
VMP1-215ENST00000592619 D2HGDHQ8N465 521 aa7.38□□□□□ -1.23
VMP1-215ENST00000592619 IPO4Q8TEX9 1081 aaKnown RBP7.38□□□□□ -1.23
VMP1-215ENST00000592619 SECISBP2LQ93073 1101 aaKnown RBP7.38□□□□□ -1.23
VMP1-215ENST00000592619 MARS2Q96GW9 593 aaKnown RBP7.38□□□□□ -1.23
VMP1-215ENST00000592619 SLC46A1Q96NT5 459 aa7.38□□□□□ -1.23
VMP1-215ENST00000592619 TRIB1Q96RU8 372 aa7.38□□□□□ -1.23
VMP1-215ENST00000592619 CDYLQ9Y232 598 aa7.38□□□□□ -1.23
VMP1-215ENST00000592619 ATP11BQ9Y2G3 1177 aa7.38□□□□□ -1.23
VMP1-215ENST00000592619 ABCC2Q92887 1545 aa7.37□□□□□ -1.23
VMP1-215ENST00000592619 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.37□□□□□ -1.23
VMP1-215ENST00000592619 AQP7P3A6NL99 342 aa7.37□□□□□ -1.23
VMP1-215ENST00000592619 AQP12BA6NM10 295 aa7.37□□□□□ -1.23
VMP1-215ENST00000592619 VPS4BO75351 444 aa7.37□□□□□ -1.23
VMP1-215ENST00000592619 SOAT2O75908 522 aa7.37□□□□□ -1.23
VMP1-215ENST00000592619 TPH1P17752 444 aa7.37□□□□□ -1.23
VMP1-215ENST00000592619 HK1P19367 917 aa7.37□□□□□ -1.23
VMP1-215ENST00000592619 RABGGTBP53611 331 aa7.37□□□□□ -1.23
VMP1-215ENST00000592619 SATB1Q01826 763 aa7.37□□□□□ -1.23
VMP1-215ENST00000592619 MGAT5BQ3V5L5 792 aa7.37□□□□□ -1.23
VMP1-215ENST00000592619 C1QL3Q5VWW1 255 aa7.37□□□□□ -1.23
VMP1-215ENST00000592619 TCTN3Q6NUS6 607 aa7.37□□□□□ -1.23
VMP1-215ENST00000592619 TAPT1Q6NXT6 567 aa7.37□□□□□ -1.23
VMP1-215ENST00000592619 LVRNQ6Q4G3 990 aa7.37□□□□□ -1.23
VMP1-215ENST00000592619 CYP26C1Q6V0L0 522 aa7.37□□□□□ -1.23
VMP1-215ENST00000592619 MMS22LQ6ZRQ5 1243 aa7.37□□□□□ -1.23
VMP1-215ENST00000592619 USP49Q70CQ1 688 aa7.37□□□□□ -1.23
VMP1-215ENST00000592619 LRIG1Q96JA1 1093 aa7.37□□□□□ -1.23
VMP1-215ENST00000592619 PHACTR3Q96KR7 559 aa7.37□□□□□ -1.23
VMP1-215ENST00000592619 MED15Q96RN5 788 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms