RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 CCDC192P0DO97 292 aa10.74□□□□□ -0.69
BRCA1-227ENST00000591849 BDNFP23560 247 aa10.74□□□□□ -0.69
BRCA1-227ENST00000591849 CDC25CP30307 473 aa10.74□□□□□ -0.69
BRCA1-227ENST00000591849 NOP14P78316 857 aaKnown RBP10.74□□□□□ -0.69
BRCA1-227ENST00000591849 TEAD2Q15562 447 aa10.74□□□□□ -0.69
BRCA1-227ENST00000591849 PRSS36Q5K4E3 855 aa10.74□□□□□ -0.69
BRCA1-227ENST00000591849 C1orf220Q5T0J3 134 aa10.74□□□□□ -0.69
BRCA1-227ENST00000591849 SDHAF4Q5VUM1 108 aa10.74□□□□□ -0.69
BRCA1-227ENST00000591849 SPOPLQ6IQ16 392 aa10.74□□□□□ -0.69
BRCA1-227ENST00000591849 FAM171BQ6P995 826 aa10.74□□□□□ -0.69
BRCA1-227ENST00000591849 PARM1Q6UWI2 310 aa10.74□□□□□ -0.69
BRCA1-227ENST00000591849 LIMS2Q7Z4I7 341 aa10.74□□□□□ -0.69
BRCA1-227ENST00000591849 FRMD5Q7Z6J6 570 aa10.74□□□□□ -0.69
BRCA1-227ENST00000591849 SUGP1Q8IWZ8 645 aaKnown RBP10.74□□□□□ -0.69
BRCA1-227ENST00000591849 YAF2Q8IY57 180 aa10.74□□□□□ -0.69
BRCA1-227ENST00000591849 MLKLQ8NB16 471 aa10.74□□□□□ -0.69
BRCA1-227ENST00000591849 FBXL13Q8NEE6 735 aa10.74□□□□□ -0.69
BRCA1-227ENST00000591849 MYCBPAPQ8TBZ2 947 aa10.74□□□□□ -0.69
BRCA1-227ENST00000591849 KXD1Q9BQD3 176 aa10.74□□□□□ -0.69
BRCA1-227ENST00000591849 NIF3L1Q9GZT8 377 aa10.74□□□□□ -0.69
BRCA1-227ENST00000591849 DNAJC25Q9H1X3 360 aa10.74□□□□□ -0.69
BRCA1-227ENST00000591849 CYP3A43Q9HB55 503 aa10.74□□□□□ -0.69
BRCA1-227ENST00000591849 ZFP14Q9HCL3 533 aa10.74□□□□□ -0.69
BRCA1-227ENST00000591849 CRTAC1Q9NQ79 661 aa10.74□□□□□ -0.69
BRCA1-227ENST00000591849 RAB20Q9NX57 234 aa10.74□□□□□ -0.69
BRCA1-227ENST00000591849 UXTQ9UBK9 157 aaPredicted RBP10.74□□□□□ -0.69
BRCA1-227ENST00000591849 DACH1Q9UI36 760 aa10.74□□□□□ -0.69
BRCA1-227ENST00000591849 KMT2EQ8IZD2 1858 aa10.74□□□□□ -0.69
BRCA1-227ENST00000591849 PDCD11Q14690 1871 aaKnown RBP10.73□□□□□ -0.69
BRCA1-227ENST00000591849 SLC38A8A6NNN8 435 aa10.73□□□□□ -0.69
BRCA1-227ENST00000591849 ANHXE9PGG2 379 aa10.73□□□□□ -0.69
BRCA1-227ENST00000591849 TRIM66O15016 1216 aa10.73□□□□□ -0.69
BRCA1-227ENST00000591849 CFHP08603 1231 aa10.73□□□□□ -0.69
BRCA1-227ENST00000591849 ATF6P18850 670 aa10.73□□□□□ -0.69
BRCA1-227ENST00000591849 CD58P19256 250 aa10.73□□□□□ -0.69
BRCA1-227ENST00000591849 BMP6P22004 513 aa10.73□□□□□ -0.69
BRCA1-227ENST00000591849 CCR2P41597 374 aa10.73□□□□□ -0.69
BRCA1-227ENST00000591849 MAGEA11P43364 429 aa10.73□□□□□ -0.69
BRCA1-227ENST00000591849 GPR15P49685 360 aa10.73□□□□□ -0.69
BRCA1-227ENST00000591849 NDST1P52848 882 aa10.73□□□□□ -0.69
BRCA1-227ENST00000591849 HTR4Q13639 388 aa10.73□□□□□ -0.69
BRCA1-227ENST00000591849 CFAP221Q4G0U5 840 aa10.73□□□□□ -0.69
BRCA1-227ENST00000591849 GPR158Q5T848 1215 aa10.73□□□□□ -0.69
BRCA1-227ENST00000591849 TTI2Q6NXR4 508 aa10.73□□□□□ -0.69
BRCA1-227ENST00000591849 VSTM1Q6UX27 236 aa10.73□□□□□ -0.69
BRCA1-227ENST00000591849 ACOT1Q86TX2 421 aa10.73□□□□□ -0.69
BRCA1-227ENST00000591849 B3GALNT2Q8NCR0 500 aa10.73□□□□□ -0.69
BRCA1-227ENST00000591849 SHKBP1Q8TBC3 707 aa10.73□□□□□ -0.69
BRCA1-227ENST00000591849 MRPS31Q92665 395 aaKnown RBP10.73□□□□□ -0.69
BRCA1-227ENST00000591849 PCED1BQ96HM7 432 aa10.73□□□□□ -0.69
BRCA1-227ENST00000591849 DUSP9Q99956 384 aaKnown RBP10.73□□□□□ -0.69
BRCA1-227ENST00000591849 DPEP3Q9H4B8 488 aa10.73□□□□□ -0.69
BRCA1-227ENST00000591849 ZNF334Q9HCZ1 680 aaPredicted RBP10.73□□□□□ -0.69
BRCA1-227ENST00000591849 EHD2Q9NZN4 543 aa10.73□□□□□ -0.69
BRCA1-227ENST00000591849 RWDD2AQ9UIY3 292 aa10.73□□□□□ -0.69
BRCA1-227ENST00000591849 SCN1AP35498 2009 aa10.73□□□□□ -0.69
BRCA1-227ENST00000591849 CACNA1HO95180 2353 aa10.73□□□□□ -0.69
BRCA1-227ENST00000591849 NARSO43776 548 aaKnown RBP10.72□□□□□ -0.69
BRCA1-227ENST00000591849 ECI2O75521 394 aa10.72□□□□□ -0.69
BRCA1-227ENST00000591849 SRFP11831 508 aa10.72□□□□□ -0.69
BRCA1-227ENST00000591849 EPHA5P54756 1037 aa10.72□□□□□ -0.69
BRCA1-227ENST00000591849 YWHAEP62258 255 aaKnown RBP10.72□□□□□ -0.69
BRCA1-227ENST00000591849 CYP4F8P98187 520 aa10.72□□□□□ -0.69
BRCA1-227ENST00000591849 LRMPQ12912 555 aa10.72□□□□□ -0.69
BRCA1-227ENST00000591849 CCDC142Q17RM4 750 aa10.72□□□□□ -0.69
BRCA1-227ENST00000591849 FAM78AQ5JUQ0 283 aa10.72□□□□□ -0.69
BRCA1-227ENST00000591849 UNC93AQ86WB7 457 aa10.72□□□□□ -0.69
BRCA1-227ENST00000591849 ZC3H3Q8IXZ2 948 aaKnown RBP10.72□□□□□ -0.69
BRCA1-227ENST00000591849 TTC39CQ8N584 583 aa10.72□□□□□ -0.69
BRCA1-227ENST00000591849 FLCNQ8NFG4 579 aa10.72□□□□□ -0.69
BRCA1-227ENST00000591849 ZSCAN18Q8TBC5 510 aaPredicted RBP10.72□□□□□ -0.69
BRCA1-227ENST00000591849 FGF14Q92915 247 aa10.72□□□□□ -0.69
BRCA1-227ENST00000591849 SMARCD2Q92925 531 aa10.72□□□□□ -0.69
BRCA1-227ENST00000591849 E2F7Q96AV8 911 aa10.72□□□□□ -0.69
BRCA1-227ENST00000591849 PKMYT1Q99640 499 aa10.72□□□□□ -0.69
BRCA1-227ENST00000591849 NT5C1AQ9BXI3 368 aa10.72□□□□□ -0.69
BRCA1-227ENST00000591849 ELOVL4Q9GZR5 314 aa10.72□□□□□ -0.69
BRCA1-227ENST00000591849 SDCBP2Q9H190 292 aa10.72□□□□□ -0.69
BRCA1-227ENST00000591849 SMOC2Q9H3U7 446 aa10.72□□□□□ -0.69
BRCA1-227ENST00000591849 DUSP12Q9UNI6 340 aa10.72□□□□□ -0.69
BRCA1-227ENST00000591849 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.72□□□□□ -0.69
BRCA1-227ENST00000591849 CLDN5O00501 218 aa10.71□□□□□ -0.69
BRCA1-227ENST00000591849 MBD3O95983 291 aa10.71□□□□□ -0.69
BRCA1-227ENST00000591849 ABL1P00519 1130 aa10.71□□□□□ -0.69
BRCA1-227ENST00000591849 ANK1P16157 1881 aa10.71□□□□□ -0.69
BRCA1-227ENST00000591849 AVPR1AP37288 418 aa10.71□□□□□ -0.69
BRCA1-227ENST00000591849 ASPAP45381 313 aa10.71□□□□□ -0.69
BRCA1-227ENST00000591849 MTIF2P46199 727 aaKnown RBP10.71□□□□□ -0.69
BRCA1-227ENST00000591849 FMO5P49326 533 aa10.71□□□□□ -0.69
BRCA1-227ENST00000591849 NLRP12P59046 1061 aa10.71□□□□□ -0.69
BRCA1-227ENST00000591849 GPC5P78333 572 aa10.71□□□□□ -0.69
BRCA1-227ENST00000591849 PFKPQ01813 784 aa10.71□□□□□ -0.69
BRCA1-227ENST00000591849 IFRD2Q12894 506 aaPredicted RBP10.71□□□□□ -0.69
BRCA1-227ENST00000591849 ORC1Q13415 861 aa10.71□□□□□ -0.69
BRCA1-227ENST00000591849 CBWD6Q4V339 395 aa10.71□□□□□ -0.69
BRCA1-227ENST00000591849 CBWD3Q5JTY5 395 aa10.71□□□□□ -0.69
BRCA1-227ENST00000591849 CBWD5Q5RIA9 395 aa10.71□□□□□ -0.69
BRCA1-227ENST00000591849 TANGO2Q6ICL3 276 aa10.71□□□□□ -0.69
BRCA1-227ENST00000591849 FOXR2Q6PJQ5 311 aa10.71□□□□□ -0.69
BRCA1-227ENST00000591849 SASS6Q6UVJ0 657 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms