RNA–Protein interactions for RNA: ENST00000591275.5

DDX39A-216, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 484 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-216ENST00000591275 C2CD2Q9Y426 696 aa17.15■□□□□ 0.34
DDX39A-216ENST00000591275 GON4LQ3T8J9 2241 aa17.15■□□□□ 0.34
DDX39A-216ENST00000591275 KPNA7A9QM74 516 aa17.14■□□□□ 0.33
DDX39A-216ENST00000591275 TRAK2O60296 914 aa17.14■□□□□ 0.33
DDX39A-216ENST00000591275 TADA3O75528 432 aa17.14■□□□□ 0.33
DDX39A-216ENST00000591275 TOP3BO95985 862 aaKnown RBP17.14■□□□□ 0.33
DDX39A-216ENST00000591275 CSH1P0DML2 217 aa17.14■□□□□ 0.33
DDX39A-216ENST00000591275 CSH2P0DML3 217 aa17.14■□□□□ 0.33
DDX39A-216ENST00000591275 IFNAR2P48551 515 aa17.14■□□□□ 0.33
DDX39A-216ENST00000591275 ZNF131P52739 623 aa17.14■□□□□ 0.33
DDX39A-216ENST00000591275 ZNF268Q14587 947 aaPredicted RBP17.14■□□□□ 0.33
DDX39A-216ENST00000591275 ZC2HC1CQ53FD0 456 aaPredicted RBP17.14■□□□□ 0.33
DDX39A-216ENST00000591275 DAB2IPQ5VWQ8 1189 aa17.14■□□□□ 0.33
DDX39A-216ENST00000591275 EFCAB13Q8IY85 973 aa17.14■□□□□ 0.33
DDX39A-216ENST00000591275 EXOC4Q96A65 974 aa17.14■□□□□ 0.33
DDX39A-216ENST00000591275 ACDQ96AP0 544 aa17.14■□□□□ 0.33
DDX39A-216ENST00000591275 ASCC3Q8N3C0 2202 aaKnown RBP17.13■□□□□ 0.33
DDX39A-216ENST00000591275 CACNA1EQ15878 2313 aa17.13■□□□□ 0.33
DDX39A-216ENST00000591275 ANTXRLA6NF34 631 aa17.13■□□□□ 0.33
DDX39A-216ENST00000591275 PATE3B3GLJ2 98 aa17.13■□□□□ 0.33
DDX39A-216ENST00000591275 KRT18P05783 430 aaKnown RBP17.13■□□□□ 0.33
DDX39A-216ENST00000591275 CYP2F1P24903 491 aa17.13■□□□□ 0.33
DDX39A-216ENST00000591275 SEC13P55735 322 aa17.13■□□□□ 0.33
DDX39A-216ENST00000591275 TSPY1Q01534 308 aa17.13■□□□□ 0.33
DDX39A-216ENST00000591275 FAM160A1Q05DH4 1040 aa17.13■□□□□ 0.33
DDX39A-216ENST00000591275 MCM6Q14566 821 aa17.13■□□□□ 0.33
DDX39A-216ENST00000591275 ZNF77Q15935 545 aa17.13■□□□□ 0.33
DDX39A-216ENST00000591275 SV2CQ496J9 727 aa17.13■□□□□ 0.33
DDX39A-216ENST00000591275 RILPL1Q5EBL4 403 aa17.13■□□□□ 0.33
DDX39A-216ENST00000591275 TSTD1Q8NFU3 115 aa17.13■□□□□ 0.33
DDX39A-216ENST00000591275 OSCP1Q8WVF1 389 aa17.13■□□□□ 0.33
DDX39A-216ENST00000591275 FIZ1Q96SL8 496 aa17.13■□□□□ 0.33
DDX39A-216ENST00000591275 CCSER1Q9C0I3 900 aa17.13■□□□□ 0.33
DDX39A-216ENST00000591275 AGO2Q9UKV8 859 aaKnown RBP17.13■□□□□ 0.33
DDX39A-216ENST00000591275 DMXL2Q8TDJ6 3036 aa17.12■□□□□ 0.33
DDX39A-216ENST00000591275 KHNYNO15037 678 aaKnown RBP17.12■□□□□ 0.33
DDX39A-216ENST00000591275 CKMP06732 381 aa17.12■□□□□ 0.33
DDX39A-216ENST00000591275 HOXB3P14651 431 aaPredicted RBP17.12■□□□□ 0.33
DDX39A-216ENST00000591275 BCKDHBP21953 392 aa17.12■□□□□ 0.33
DDX39A-216ENST00000591275 SCP2P22307 547 aa17.12■□□□□ 0.33
DDX39A-216ENST00000591275 ACAT1P24752 427 aaKnown RBP17.12■□□□□ 0.33
DDX39A-216ENST00000591275 GTF2BQ00403 316 aa17.12■□□□□ 0.33
DDX39A-216ENST00000591275 COL9A2Q14055 689 aaPredicted RBP17.12■□□□□ 0.33
DDX39A-216ENST00000591275 NFE2Q16621 373 aaPredicted RBP17.12■□□□□ 0.33
DDX39A-216ENST00000591275 CCDC142Q17RM4 750 aa17.12■□□□□ 0.33
DDX39A-216ENST00000591275 EML3Q32P44 896 aa17.12■□□□□ 0.33
DDX39A-216ENST00000591275 USP39Q53GS9 565 aaKnown RBP17.12■□□□□ 0.33
DDX39A-216ENST00000591275 PMS2CLQ68D20 193 aa17.12■□□□□ 0.33
DDX39A-216ENST00000591275 ATP2A3Q93084 1043 aa17.12■□□□□ 0.33
DDX39A-216ENST00000591275 LINC00597Q9H2U6 94 aa17.12■□□□□ 0.33
DDX39A-216ENST00000591275 TMEM9BQ9NQ34 198 aa17.12■□□□□ 0.33
DDX39A-216ENST00000591275 BLOC1S4Q9NUP1 217 aa17.12■□□□□ 0.33
DDX39A-216ENST00000591275 WASF3Q9UPY6 502 aa17.12■□□□□ 0.33
DDX39A-216ENST00000591275 TRAV19A0A0A6YYK7 116 aa17.11■□□□□ 0.33
DDX39A-216ENST00000591275 SOBPA7XYQ1 873 aa17.11■□□□□ 0.33
DDX39A-216ENST00000591275 TBCAO75347 108 aaKnown RBP17.11■□□□□ 0.33
DDX39A-216ENST00000591275 USP17L7P0C7H9 530 aa17.11■□□□□ 0.33
DDX39A-216ENST00000591275 RPL10AP62906 217 aaKnown RBP17.11■□□□□ 0.33
DDX39A-216ENST00000591275 USP4Q13107 963 aa17.11■□□□□ 0.33
DDX39A-216ENST00000591275 UAP1L1Q3KQV9 507 aa17.11■□□□□ 0.33
DDX39A-216ENST00000591275 C2orf27AQ580R0 203 aa17.11■□□□□ 0.33
DDX39A-216ENST00000591275 ANO7Q6IWH7 933 aa17.11■□□□□ 0.33
DDX39A-216ENST00000591275 CRELD2Q6UXH1 353 aaPredicted RBP17.11■□□□□ 0.33
DDX39A-216ENST00000591275 CYP2U1Q7Z449 544 aa17.11■□□□□ 0.33
DDX39A-216ENST00000591275 TTC30AQ86WT1 665 aa17.11■□□□□ 0.33
DDX39A-216ENST00000591275 PDCL2Q8N4E4 241 aa17.11■□□□□ 0.33
DDX39A-216ENST00000591275 ARL14EPQ8N8R7 260 aaPredicted RBP17.11■□□□□ 0.33
DDX39A-216ENST00000591275 CALML4Q96GE6 196 aa17.11■□□□□ 0.33
DDX39A-216ENST00000591275 FAM84AQ96KN4 292 aa17.11■□□□□ 0.33
DDX39A-216ENST00000591275 ZNF560Q96MR9 790 aa17.11■□□□□ 0.33
DDX39A-216ENST00000591275 ADAM33Q9BZ11 813 aa17.11■□□□□ 0.33
DDX39A-216ENST00000591275 TMEM206Q9H813 350 aa17.11■□□□□ 0.33
DDX39A-216ENST00000591275 DDX43Q9NXZ2 648 aaKnown RBP17.11■□□□□ 0.33
DDX39A-216ENST00000591275 UXTQ9UBK9 157 aaPredicted RBP17.11■□□□□ 0.33
DDX39A-216ENST00000591275 L1RE1Q9UN81 338 aa17.11■□□□□ 0.33
DDX39A-216ENST00000591275 ANAPC1Q9H1A4 1944 aa17.1■□□□□ 0.33
DDX39A-216ENST00000591275 WDFY3Q8IZQ1 3526 aa17.1■□□□□ 0.33
DDX39A-216ENST00000591275 NBEAQ8NFP9 2946 aa17.1■□□□□ 0.33
DDX39A-216ENST00000591275 C2orf78A6NCI8 922 aa17.1■□□□□ 0.33
DDX39A-216ENST00000591275 CDX4O14627 284 aaPredicted RBP17.1■□□□□ 0.33
DDX39A-216ENST00000591275 NOL4O94818 638 aa17.1■□□□□ 0.33
DDX39A-216ENST00000591275 PLCG1P19174 1290 aa17.1■□□□□ 0.33
DDX39A-216ENST00000591275 POLR2BP30876 1174 aaKnown RBP17.1■□□□□ 0.33
DDX39A-216ENST00000591275 UBA7P41226 1012 aa17.1■□□□□ 0.33
DDX39A-216ENST00000591275 DHPSP49366 369 aaPredicted RBP17.1■□□□□ 0.33
DDX39A-216ENST00000591275 WNT7BP56706 349 aa17.1■□□□□ 0.33
DDX39A-216ENST00000591275 IRX4P78413 519 aa17.1■□□□□ 0.33
DDX39A-216ENST00000591275 ARL6IP4Q66PJ3 421 aaKnown RBP17.1■□□□□ 0.33
DDX39A-216ENST00000591275 SCARA3Q6AZY7 606 aa17.1■□□□□ 0.33
DDX39A-216ENST00000591275 SLFN12LQ6IEE8 588 aa17.1■□□□□ 0.33
DDX39A-216ENST00000591275 CCDC33Q8N5R6 958 aa17.1■□□□□ 0.33
DDX39A-216ENST00000591275 KDF1Q8NAX2 398 aaPredicted RBP17.1■□□□□ 0.33
DDX39A-216ENST00000591275 SH3RF2Q8TEC5 729 aa17.1■□□□□ 0.33
DDX39A-216ENST00000591275 USP33Q8TEY7 942 aa17.1■□□□□ 0.33
DDX39A-216ENST00000591275 LEO1Q8WVC0 666 aaPredicted RBP17.1■□□□□ 0.33
DDX39A-216ENST00000591275 POMGNT1Q8WZA1 660 aa17.1■□□□□ 0.33
DDX39A-216ENST00000591275 TRMT2BQ96GJ1 504 aaKnown RBP17.1■□□□□ 0.33
DDX39A-216ENST00000591275 MYRFLQ96LU7 910 aa17.1■□□□□ 0.33
DDX39A-216ENST00000591275 SCNM1Q9BWG6 230 aa17.1■□□□□ 0.33
DDX39A-216ENST00000591275 TMEM121BQ9BXQ6 578 aaPredicted RBP17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms