RNA–Protein interactions for RNA: ENST00000590627.5

GCDH-213, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 1 (best)

Gene GCDH, Length 1,051 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-213ENST00000590627 SDCBP2Q9H190 292 aa17.69■□□□□ 0.42
GCDH-213ENST00000590627 SMYD3Q9H7B4 428 aa17.69■□□□□ 0.42
GCDH-213ENST00000590627 DPP7Q9UHL4 492 aa17.69■□□□□ 0.42
GCDH-213ENST00000590627 ADAM28Q9UKQ2 775 aa17.69■□□□□ 0.42
GCDH-213ENST00000590627 PRG3Q9Y2Y8 225 aaPredicted RBP17.69■□□□□ 0.42
GCDH-213ENST00000590627 ZFHX2Q9C0A1 2572 aaPredicted RBP17.68■□□□□ 0.42
GCDH-213ENST00000590627 F8W810 466 aa17.68■□□□□ 0.42
GCDH-213ENST00000590627 FOXN3O00409 490 aaPredicted RBP17.68■□□□□ 0.42
GCDH-213ENST00000590627 TRAPPC3O43617 180 aa17.68■□□□□ 0.42
GCDH-213ENST00000590627 HUS1O60921 280 aa17.68■□□□□ 0.42
GCDH-213ENST00000590627 TADA2AO75478 443 aa17.68■□□□□ 0.42
GCDH-213ENST00000590627 CYP11A1P05108 521 aa17.68■□□□□ 0.42
GCDH-213ENST00000590627 ADH1AP07327 375 aa17.68■□□□□ 0.42
GCDH-213ENST00000590627 TYMPP19971 482 aa17.68■□□□□ 0.42
GCDH-213ENST00000590627 HNRNPH3P31942 346 aaKnown RBP17.68■□□□□ 0.42
GCDH-213ENST00000590627 SOX5P35711 763 aa17.68■□□□□ 0.42
GCDH-213ENST00000590627 STAT1P42224 750 aa17.68■□□□□ 0.42
GCDH-213ENST00000590627 CLCN5P51795 746 aa17.68■□□□□ 0.42
GCDH-213ENST00000590627 ELAVL2Q12926 359 aaKnown RBP17.68■□□□□ 0.42
GCDH-213ENST00000590627 ARHGAP44Q17R89 818 aa17.68■□□□□ 0.42
GCDH-213ENST00000590627 ELMSAN1Q6PJG2 1045 aa17.68■□□□□ 0.42
GCDH-213ENST00000590627 CYP26C1Q6V0L0 522 aa17.68■□□□□ 0.42
GCDH-213ENST00000590627 DSTYKQ6XUX3 929 aa17.68■□□□□ 0.42
GCDH-213ENST00000590627 FAM71AQ8IYT1 594 aa17.68■□□□□ 0.42
GCDH-213ENST00000590627 RNF168Q8IYW5 571 aaPredicted RBP17.68■□□□□ 0.42
GCDH-213ENST00000590627 TMEM86AQ8N2M4 240 aa17.68■□□□□ 0.42
GCDH-213ENST00000590627 TC2NQ8N9U0 490 aa17.68■□□□□ 0.42
GCDH-213ENST00000590627 APPL2Q8NEU8 664 aa17.68■□□□□ 0.42
GCDH-213ENST00000590627 OR8K1Q8NGG5 319 aa17.68■□□□□ 0.42
GCDH-213ENST00000590627 MMS19Q96T76 1030 aa17.68■□□□□ 0.42
GCDH-213ENST00000590627 RHOBTB2Q9BYZ6 727 aa17.68■□□□□ 0.42
GCDH-213ENST00000590627 SMOC2Q9H3U7 446 aa17.68■□□□□ 0.42
GCDH-213ENST00000590627 CISHQ9NSE2 258 aa17.68■□□□□ 0.42
GCDH-213ENST00000590627 FAM86C1Q9NVL1 165 aa17.68■□□□□ 0.42
GCDH-213ENST00000590627 AIPL1Q9NZN9 384 aa17.68■□□□□ 0.42
GCDH-213ENST00000590627 DSEQ9UL01 958 aa17.68■□□□□ 0.42
GCDH-213ENST00000590627 PCDHB8Q9UN66 801 aa17.68■□□□□ 0.42
GCDH-213ENST00000590627 L1RE1Q9UN81 338 aa17.68■□□□□ 0.42
GCDH-213ENST00000590627 C2orf16Q68DN1 1984 aa17.68■□□□□ 0.42
GCDH-213ENST00000590627 MYO15AQ9UKN7 3530 aa17.67■□□□□ 0.42
GCDH-213ENST00000590627 LRRC53A6NM62 1247 aa17.67■□□□□ 0.42
GCDH-213ENST00000590627 PROB1E7EW31 1015 aa17.67■□□□□ 0.42
GCDH-213ENST00000590627 H0Y858 1186 aa17.67■□□□□ 0.42
GCDH-213ENST00000590627 C1RP00736 705 aa17.67■□□□□ 0.42
GCDH-213ENST00000590627 ODC1P11926 461 aa17.67■□□□□ 0.42
GCDH-213ENST00000590627 WARSP23381 471 aaKnown RBP17.67■□□□□ 0.42
GCDH-213ENST00000590627 BRCC3P46736 316 aa17.67■□□□□ 0.42
GCDH-213ENST00000590627 ADKP55263 362 aaKnown RBP17.67■□□□□ 0.42
GCDH-213ENST00000590627 CDH8P55286 799 aa17.67■□□□□ 0.42
GCDH-213ENST00000590627 ASTLQ6HA08 431 aaPredicted RBP17.67■□□□□ 0.42
GCDH-213ENST00000590627 SCARA5Q6ZMJ2 495 aa17.67■□□□□ 0.42
GCDH-213ENST00000590627 PDCL2Q8N4E4 241 aa17.67■□□□□ 0.42
GCDH-213ENST00000590627 TMEM105Q8N8V8 129 aa17.67■□□□□ 0.42
GCDH-213ENST00000590627 KBTBD7Q8WVZ9 684 aa17.67■□□□□ 0.42
GCDH-213ENST00000590627 PANX2Q96RD6 677 aa17.67■□□□□ 0.42
GCDH-213ENST00000590627 RXFP1Q9HBX9 757 aa17.67■□□□□ 0.42
GCDH-213ENST00000590627 GABRDO14764 452 aa17.66■□□□□ 0.42
GCDH-213ENST00000590627 SYN3O14994 580 aa17.66■□□□□ 0.42
GCDH-213ENST00000590627 GFRA3O60609 400 aa17.66■□□□□ 0.42
GCDH-213ENST00000590627 CILPO75339 1184 aa17.66■□□□□ 0.42
GCDH-213ENST00000590627 GLUD2P49448 558 aa17.66■□□□□ 0.42
GCDH-213ENST00000590627 ZNF132P52740 706 aa17.66■□□□□ 0.42
GCDH-213ENST00000590627 TDGQ13569 410 aa17.66■□□□□ 0.42
GCDH-213ENST00000590627 SFMBT2Q5VUG0 894 aa17.66■□□□□ 0.42
GCDH-213ENST00000590627 KIAA0319Q5VV43 1072 aa17.66■□□□□ 0.42
GCDH-213ENST00000590627 WSCD1Q658N2 575 aa17.66■□□□□ 0.42
GCDH-213ENST00000590627 FUT10Q6P4F1 479 aa17.66■□□□□ 0.42
GCDH-213ENST00000590627 CCDC186Q7Z3E2 898 aa17.66■□□□□ 0.42
GCDH-213ENST00000590627 UNC93AQ86WB7 457 aa17.66■□□□□ 0.42
GCDH-213ENST00000590627 GPR65Q8IYL9 337 aa17.66■□□□□ 0.42
GCDH-213ENST00000590627 ADGRF2Q8IZF7 708 aa17.66■□□□□ 0.42
GCDH-213ENST00000590627 FEZF2Q8TBJ5 459 aa17.66■□□□□ 0.42
GCDH-213ENST00000590627 HASPINQ8TF76 798 aa17.66■□□□□ 0.42
GCDH-213ENST00000590627 HDAC7Q8WUI4 952 aa17.66■□□□□ 0.42
GCDH-213ENST00000590627 MRPL45Q9BRJ2 306 aaKnown RBP17.66■□□□□ 0.42
GCDH-213ENST00000590627 MFSD1Q9H3U5 465 aa17.66■□□□□ 0.42
GCDH-213ENST00000590627 MAN1C1Q9NR34 630 aa17.66■□□□□ 0.42
GCDH-213ENST00000590627 ABHD10Q9NUJ1 306 aa17.66■□□□□ 0.42
GCDH-213ENST00000590627 PCDHB4Q9Y5E5 795 aa17.66■□□□□ 0.42
GCDH-213ENST00000590627 SF3B1O75533 1304 aaKnown RBP eCLIP17.66■□□□□ 0.42
GCDH-213ENST00000590627 PLXNA3P51805 1871 aa17.65■□□□□ 0.42
GCDH-213ENST00000590627 I3L4J1 428 aa17.65■□□□□ 0.42
GCDH-213ENST00000590627 C2CD2LO14523 706 aa17.65■□□□□ 0.42
GCDH-213ENST00000590627 TEX28O15482 410 aa17.65■□□□□ 0.42
GCDH-213ENST00000590627 CCDC172P0C7W6 258 aa17.65■□□□□ 0.42
GCDH-213ENST00000590627 CD58P19256 250 aa17.65■□□□□ 0.42
GCDH-213ENST00000590627 FGFR3P22607 806 aa17.65■□□□□ 0.42
GCDH-213ENST00000590627 FECHP22830 423 aa17.65■□□□□ 0.42
GCDH-213ENST00000590627 RAP1GAPP47736 663 aa17.65■□□□□ 0.42
GCDH-213ENST00000590627 LHX1P48742 406 aa17.65■□□□□ 0.42
GCDH-213ENST00000590627 DSG1Q02413 1049 aa17.65■□□□□ 0.42
GCDH-213ENST00000590627 GOLGA8FQ08AF8 430 aa17.65■□□□□ 0.42
GCDH-213ENST00000590627 GOLGA8DPQ0D2H9 430 aa17.65■□□□□ 0.42
GCDH-213ENST00000590627 MEA1Q16626 185 aa17.65■□□□□ 0.42
GCDH-213ENST00000590627 IRF2BP2Q7Z5L9 587 aa17.65■□□□□ 0.42
GCDH-213ENST00000590627 WHAMMQ8TF30 809 aa17.65■□□□□ 0.42
GCDH-213ENST00000590627 GPR62Q9BZJ7 368 aa17.65■□□□□ 0.42
GCDH-213ENST00000590627 KCNK12Q9HB15 430 aa17.65■□□□□ 0.42
GCDH-213ENST00000590627 CHST7Q9NS84 486 aa17.65■□□□□ 0.42
GCDH-213ENST00000590627 IGSF9Q9P2J2 1179 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms