RNA–Protein interactions for RNA: ENST00000588300.1

ERCC1-206, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2

Gene ERCC1, Length 1,055 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-206ENST00000588300 NASPP49321 788 aaPredicted RBP17.09■□□□□ 0.33
ERCC1-206ENST00000588300 ATXN1P54253 815 aaKnown RBP17.09■□□□□ 0.33
ERCC1-206ENST00000588300 AMPD2Q01433 879 aa17.09■□□□□ 0.33
ERCC1-206ENST00000588300 MYO1EQ12965 1108 aa17.09■□□□□ 0.33
ERCC1-206ENST00000588300 ZNF268Q14587 947 aaPredicted RBP17.09■□□□□ 0.33
ERCC1-206ENST00000588300 STK38Q15208 465 aa17.09■□□□□ 0.33
ERCC1-206ENST00000588300 SURF1Q15526 300 aa17.09■□□□□ 0.33
ERCC1-206ENST00000588300 DDR2Q16832 855 aa17.09■□□□□ 0.33
ERCC1-206ENST00000588300 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.09■□□□□ 0.33
ERCC1-206ENST00000588300 OSTM1Q86WC4 334 aa17.09■□□□□ 0.33
ERCC1-206ENST00000588300 SPATA2LQ8IUW3 424 aaPredicted RBP17.09■□□□□ 0.33
ERCC1-206ENST00000588300 TRMT2BQ96GJ1 504 aaKnown RBP17.09■□□□□ 0.33
ERCC1-206ENST00000588300 PKMYT1Q99640 499 aa17.09■□□□□ 0.33
ERCC1-206ENST00000588300 LRRC27Q9C0I9 530 aa17.09■□□□□ 0.33
ERCC1-206ENST00000588300 TNMDQ9H2S6 317 aa17.09■□□□□ 0.33
ERCC1-206ENST00000588300 EBF3Q9H4W6 596 aa17.09■□□□□ 0.33
ERCC1-206ENST00000588300 INTS13Q9NVM9 706 aa17.09■□□□□ 0.33
ERCC1-206ENST00000588300 C2orf42Q9NWW7 574 aa17.09■□□□□ 0.33
ERCC1-206ENST00000588300 SIX4Q9UIU6 781 aa17.09■□□□□ 0.33
ERCC1-206ENST00000588300 GTF3C4Q9UKN8 822 aa17.09■□□□□ 0.33
ERCC1-206ENST00000588300 GABRDO14764 452 aa17.08■□□□□ 0.32
ERCC1-206ENST00000588300 STX6O43752 255 aa17.08■□□□□ 0.32
ERCC1-206ENST00000588300 TADA3O75528 432 aa17.08■□□□□ 0.32
ERCC1-206ENST00000588300 TNNC2P02585 160 aa17.08■□□□□ 0.32
ERCC1-206ENST00000588300 GRSF1Q12849 480 aaKnown RBP eCLIP17.08■□□□□ 0.32
ERCC1-206ENST00000588300 SRSF5Q13243 272 aaKnown RBP17.08■□□□□ 0.32
ERCC1-206ENST00000588300 CFAP221Q4G0U5 840 aa17.08■□□□□ 0.32
ERCC1-206ENST00000588300 TMEM196Q5HYL7 178 aa17.08■□□□□ 0.32
ERCC1-206ENST00000588300 LMBRD2Q68DH5 695 aaPredicted RBP17.08■□□□□ 0.32
ERCC1-206ENST00000588300 SCARA3Q6AZY7 606 aa17.08■□□□□ 0.32
ERCC1-206ENST00000588300 TRIM68Q6AZZ1 485 aa17.08■□□□□ 0.32
ERCC1-206ENST00000588300 DPH6Q7L8W6 267 aa17.08■□□□□ 0.32
ERCC1-206ENST00000588300 WDR5BQ86VZ2 330 aa17.08■□□□□ 0.32
ERCC1-206ENST00000588300 FUBP3Q96I24 572 aaKnown RBP eCLIP17.08■□□□□ 0.32
ERCC1-206ENST00000588300 MYRFLQ96LU7 910 aa17.08■□□□□ 0.32
ERCC1-206ENST00000588300 RTKNQ9BST9 563 aa17.08■□□□□ 0.32
ERCC1-206ENST00000588300 RALGAPA1Q6GYQ0 2036 aa17.08■□□□□ 0.32
ERCC1-206ENST00000588300 ZNF233A6NK53 670 aa17.07■□□□□ 0.32
ERCC1-206ENST00000588300 TRDMT1O14717 391 aaKnown RBP17.07■□□□□ 0.32
ERCC1-206ENST00000588300 FAM160A1Q05DH4 1040 aa17.07■□□□□ 0.32
ERCC1-206ENST00000588300 PDGFRLQ15198 375 aa17.07■□□□□ 0.32
ERCC1-206ENST00000588300 SOWAHAQ2M3V2 549 aa17.07■□□□□ 0.32
ERCC1-206ENST00000588300 FSTL4Q6MZW2 842 aa17.07■□□□□ 0.32
ERCC1-206ENST00000588300 C4orf50Q6ZRC1 276 aa17.07■□□□□ 0.32
ERCC1-206ENST00000588300 CEP68Q76N32 757 aa17.07■□□□□ 0.32
ERCC1-206ENST00000588300 SCN4BQ8IWT1 228 aa17.07■□□□□ 0.32
ERCC1-206ENST00000588300 LINC00301Q8NCQ3 95 aa17.07■□□□□ 0.32
ERCC1-206ENST00000588300 EXOC4Q96A65 974 aa17.07■□□□□ 0.32
ERCC1-206ENST00000588300 HPDLQ96IR7 371 aa17.07■□□□□ 0.32
ERCC1-206ENST00000588300 CUEDC2Q9H467 287 aa17.07■□□□□ 0.32
ERCC1-206ENST00000588300 TRPC7Q9HCX4 862 aa17.07■□□□□ 0.32
ERCC1-206ENST00000588300 FOXD4L1Q9NU39 408 aa17.07■□□□□ 0.32
ERCC1-206ENST00000588300 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.07■□□□□ 0.32
ERCC1-206ENST00000588300 ANAPC1Q9H1A4 1944 aa17.06■□□□□ 0.32
ERCC1-206ENST00000588300 PTPRJQ12913 1337 aa17.06■□□□□ 0.32
ERCC1-206ENST00000588300 TRAV19A0A0A6YYK7 116 aa17.06■□□□□ 0.32
ERCC1-206ENST00000588300 OTOL1A6NHN0 477 aaPredicted RBP17.06■□□□□ 0.32
ERCC1-206ENST00000588300 SPTLC2O15270 562 aa17.06■□□□□ 0.32
ERCC1-206ENST00000588300 HCRTO43612 131 aa17.06■□□□□ 0.32
ERCC1-206ENST00000588300 ATG13O75143 517 aa17.06■□□□□ 0.32
ERCC1-206ENST00000588300 CKMP06732 381 aa17.06■□□□□ 0.32
ERCC1-206ENST00000588300 USP17L7P0C7H9 530 aa17.06■□□□□ 0.32
ERCC1-206ENST00000588300 ARSAP15289 507 aa17.06■□□□□ 0.32
ERCC1-206ENST00000588300 MAGEA11P43364 429 aa17.06■□□□□ 0.32
ERCC1-206ENST00000588300 AMPD3Q01432 767 aa17.06■□□□□ 0.32
ERCC1-206ENST00000588300 MTF1Q14872 753 aa17.06■□□□□ 0.32
ERCC1-206ENST00000588300 CCDC142Q17RM4 750 aa17.06■□□□□ 0.32
ERCC1-206ENST00000588300 DUOXA2Q1HG44 320 aa17.06■□□□□ 0.32
ERCC1-206ENST00000588300 CBWD2Q8IUF1 395 aa17.06■□□□□ 0.32
ERCC1-206ENST00000588300 CPA6Q8N4T0 437 aa17.06■□□□□ 0.32
ERCC1-206ENST00000588300 FSIP1Q8NA03 581 aa17.06■□□□□ 0.32
ERCC1-206ENST00000588300 GLIS3Q8NEA6 775 aa17.06■□□□□ 0.32
ERCC1-206ENST00000588300 OR5B17Q8NGF7 314 aa17.06■□□□□ 0.32
ERCC1-206ENST00000588300 RIN3Q8TB24 985 aa17.06■□□□□ 0.32
ERCC1-206ENST00000588300 NETO1Q8TDF5 533 aa17.06■□□□□ 0.32
ERCC1-206ENST00000588300 CHFRQ96EP1 664 aa17.06■□□□□ 0.32
ERCC1-206ENST00000588300 SYT15Q9BQS2 421 aa17.06■□□□□ 0.32
ERCC1-206ENST00000588300 TRIM9Q9C026 710 aa17.06■□□□□ 0.32
ERCC1-206ENST00000588300 KIAA1586Q9HCI6 787 aa17.06■□□□□ 0.32
ERCC1-206ENST00000588300 SEMA4GQ9NTN9 838 aa17.06■□□□□ 0.32
ERCC1-206ENST00000588300 KBTBD4Q9NVX7 518 aa17.06■□□□□ 0.32
ERCC1-206ENST00000588300 HSPBP1Q9NZL4 362 aa17.06■□□□□ 0.32
ERCC1-206ENST00000588300 HELZP42694 1942 aaKnown RBP17.06■□□□□ 0.32
ERCC1-206ENST00000588300 GREB1Q4ZG55 1949 aa17.06■□□□□ 0.32
ERCC1-206ENST00000588300 NCOR2Q9Y618 2525 aa17.05■□□□□ 0.32
ERCC1-206ENST00000588300 K7ELQ4 463 aaPredicted RBP17.05■□□□□ 0.32
ERCC1-206ENST00000588300 EIF3DO15371 548 aaKnown RBP eCLIP17.05■□□□□ 0.32
ERCC1-206ENST00000588300 PPP6R2O75170 966 aa17.05■□□□□ 0.32
ERCC1-206ENST00000588300 ASIC1P78348 528 aa17.05■□□□□ 0.32
ERCC1-206ENST00000588300 MAPRE1Q15691 268 aaKnown RBP17.05■□□□□ 0.32
ERCC1-206ENST00000588300 ZNF77Q15935 545 aa17.05■□□□□ 0.32
ERCC1-206ENST00000588300 E2F4Q16254 413 aa17.05■□□□□ 0.32
ERCC1-206ENST00000588300 CSRP2Q16527 193 aa17.05■□□□□ 0.32
ERCC1-206ENST00000588300 PKN3Q6P5Z2 889 aa17.05■□□□□ 0.32
ERCC1-206ENST00000588300 FAM171BQ6P995 826 aa17.05■□□□□ 0.32
ERCC1-206ENST00000588300 PRR23CQ6ZRP0 262 aa17.05■□□□□ 0.32
ERCC1-206ENST00000588300 LIMS2Q7Z4I7 341 aa17.05■□□□□ 0.32
ERCC1-206ENST00000588300 WDR49Q8IV35 697 aa17.05■□□□□ 0.32
ERCC1-206ENST00000588300 FAM160A2Q8N612 972 aaPredicted RBP17.05■□□□□ 0.32
ERCC1-206ENST00000588300 OSCP1Q8WVF1 389 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms