RNA–Protein interactions for RNA: ENST00000587988.5

SMARCA4-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 552 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-213ENST00000587988 CPLX3Q8WVH0 158 aa11.38□□□□□ -0.59
SMARCA4-213ENST00000587988 BAP1Q92560 729 aa11.38□□□□□ -0.59
SMARCA4-213ENST00000587988 ZNF518BQ9C0D4 1074 aa11.38□□□□□ -0.59
SMARCA4-213ENST00000587988 CYP4F11Q9HBI6 524 aa11.38□□□□□ -0.59
SMARCA4-213ENST00000587988 TMEM30AQ9NV96 361 aa11.38□□□□□ -0.59
SMARCA4-213ENST00000587988 PCDHB5Q9Y5E4 795 aa11.38□□□□□ -0.59
SMARCA4-213ENST00000587988 PTPRDP23468 1912 aa11.38□□□□□ -0.59
SMARCA4-213ENST00000587988 ITIH6Q6UXX5 1313 aa11.37□□□□□ -0.59
SMARCA4-213ENST00000587988 TBX10O75333 385 aa11.37□□□□□ -0.59
SMARCA4-213ENST00000587988 RFPL2O75678 378 aa11.37□□□□□ -0.59
SMARCA4-213ENST00000587988 BEST1O76090 585 aa11.37□□□□□ -0.59
SMARCA4-213ENST00000587988 GFPT2O94808 682 aa11.37□□□□□ -0.59
SMARCA4-213ENST00000587988 C1RP00736 705 aa11.37□□□□□ -0.59
SMARCA4-213ENST00000587988 GYPCP04921 128 aa11.37□□□□□ -0.59
SMARCA4-213ENST00000587988 C8AP07357 584 aa11.37□□□□□ -0.59
SMARCA4-213ENST00000587988 PAEPP09466 180 aa11.37□□□□□ -0.59
SMARCA4-213ENST00000587988 HAPLN1P10915 354 aaPredicted RBP11.37□□□□□ -0.59
SMARCA4-213ENST00000587988 VDRP11473 427 aa11.37□□□□□ -0.59
SMARCA4-213ENST00000587988 CD19P15391 556 aa11.37□□□□□ -0.59
SMARCA4-213ENST00000587988 ADORA2BP29275 332 aa11.37□□□□□ -0.59
SMARCA4-213ENST00000587988 ELF1P32519 619 aa11.37□□□□□ -0.59
SMARCA4-213ENST00000587988 SOX5P35711 763 aa11.37□□□□□ -0.59
SMARCA4-213ENST00000587988 SMARCB1Q12824 385 aa11.37□□□□□ -0.59
SMARCA4-213ENST00000587988 COL19A1Q14993 1142 aa11.37□□□□□ -0.59
SMARCA4-213ENST00000587988 MAPRE1Q15691 268 aaKnown RBP11.37□□□□□ -0.59
SMARCA4-213ENST00000587988 MGAT5BQ3V5L5 792 aa11.37□□□□□ -0.59
SMARCA4-213ENST00000587988 CFAP221Q4G0U5 840 aa11.37□□□□□ -0.59
SMARCA4-213ENST00000587988 SGO2Q562F6 1265 aa11.37□□□□□ -0.59
SMARCA4-213ENST00000587988 FIGNQ5HY92 759 aa11.37□□□□□ -0.59
SMARCA4-213ENST00000587988 SDHAF4Q5VUM1 108 aa11.37□□□□□ -0.59
SMARCA4-213ENST00000587988 C4orf50Q6ZRC1 276 aa11.37□□□□□ -0.59
SMARCA4-213ENST00000587988 CACNA2D4Q7Z3S7 1137 aa11.37□□□□□ -0.59
SMARCA4-213ENST00000587988 FAM35AQ86V20 835 aa11.37□□□□□ -0.59
SMARCA4-213ENST00000587988 SLC47A2Q86VL8 602 aa11.37□□□□□ -0.59
SMARCA4-213ENST00000587988 SLC7A14Q8TBB6 771 aa11.37□□□□□ -0.59
SMARCA4-213ENST00000587988 SPPL2BQ8TCT7 592 aa11.37□□□□□ -0.59
SMARCA4-213ENST00000587988 C2orf15Q8WU43 125 aaKnown RBP11.37□□□□□ -0.59
SMARCA4-213ENST00000587988 CASP10Q92851 521 aa11.37□□□□□ -0.59
SMARCA4-213ENST00000587988 SPAG5Q96R06 1193 aa11.37□□□□□ -0.59
SMARCA4-213ENST00000587988 SEPT5Q99719 369 aaPredicted RBP11.37□□□□□ -0.59
SMARCA4-213ENST00000587988 HNRNPABQ99729 332 aaKnown RBP11.37□□□□□ -0.59
SMARCA4-213ENST00000587988 MED10Q9BTT4 135 aa11.37□□□□□ -0.59
SMARCA4-213ENST00000587988 NUP58Q9BVL2 599 aa11.37□□□□□ -0.59
SMARCA4-213ENST00000587988 PLEKHA4Q9H4M7 779 aa11.37□□□□□ -0.59
SMARCA4-213ENST00000587988 CLDND1Q9NY35 253 aa11.37□□□□□ -0.59
SMARCA4-213ENST00000587988 CLEC1BQ9P126 229 aa11.37□□□□□ -0.59
SMARCA4-213ENST00000587988 DAAM1Q9Y4D1 1078 aa11.37□□□□□ -0.59
SMARCA4-213ENST00000587988 GOLGA6L3A6NEY3 463 aa11.36□□□□□ -0.59
SMARCA4-213ENST00000587988 LRRC53A6NM62 1247 aa11.36□□□□□ -0.59
SMARCA4-213ENST00000587988 PRRG1O14668 218 aa11.36□□□□□ -0.59
SMARCA4-213ENST00000587988 ZMYND10O75800 440 aa11.36□□□□□ -0.59
SMARCA4-213ENST00000587988 CFHP08603 1231 aa11.36□□□□□ -0.59
SMARCA4-213ENST00000587988 GNA15P30679 374 aa11.36□□□□□ -0.59
SMARCA4-213ENST00000587988 CASP14P31944 242 aa11.36□□□□□ -0.59
SMARCA4-213ENST00000587988 STAT1P42224 750 aa11.36□□□□□ -0.59
SMARCA4-213ENST00000587988 GOLGA8FQ08AF8 430 aa11.36□□□□□ -0.59
SMARCA4-213ENST00000587988 GOLGA8DPQ0D2H9 430 aa11.36□□□□□ -0.59
SMARCA4-213ENST00000587988 TWF1Q12792 350 aa11.36□□□□□ -0.59
SMARCA4-213ENST00000587988 DDR2Q16832 855 aa11.36□□□□□ -0.59
SMARCA4-213ENST00000587988 E4F1Q66K89 784 aaPredicted RBP11.36□□□□□ -0.59
SMARCA4-213ENST00000587988 ARHGAP17Q68EM7 881 aa11.36□□□□□ -0.59
SMARCA4-213ENST00000587988 SPECC1LQ69YQ0 1117 aa11.36□□□□□ -0.59
SMARCA4-213ENST00000587988 ANKRD54Q6NXT1 300 aa11.36□□□□□ -0.59
SMARCA4-213ENST00000587988 SYCE2Q6PIF2 218 aa11.36□□□□□ -0.59
SMARCA4-213ENST00000587988 EP400NLQ6ZTU2 488 aa11.36□□□□□ -0.59
SMARCA4-213ENST00000587988 TMC6Q7Z403 805 aa11.36□□□□□ -0.59
SMARCA4-213ENST00000587988 STKLD1Q8NE28 680 aa11.36□□□□□ -0.59
SMARCA4-213ENST00000587988 ZMIZ2Q8NF64 920 aa11.36□□□□□ -0.59
SMARCA4-213ENST00000587988 GPR152Q8TDT2 470 aa11.36□□□□□ -0.59
SMARCA4-213ENST00000587988 HDAC7Q8WUI4 952 aa11.36□□□□□ -0.59
SMARCA4-213ENST00000587988 ZNF606Q8WXB4 792 aa11.36□□□□□ -0.59
SMARCA4-213ENST00000587988 PABPC5Q96DU9 382 aaKnown RBP11.36□□□□□ -0.59
SMARCA4-213ENST00000587988 MRFAP1L1Q96HT8 127 aa11.36□□□□□ -0.59
SMARCA4-213ENST00000587988 FUBP3Q96I24 572 aaKnown RBP eCLIP11.36□□□□□ -0.59
SMARCA4-213ENST00000587988 KCNK16Q96T55 309 aa11.36□□□□□ -0.59
SMARCA4-213ENST00000587988 SMOQ99835 787 aa11.36□□□□□ -0.59
SMARCA4-213ENST00000587988 APOL5Q9BWW9 433 aa11.36□□□□□ -0.59
SMARCA4-213ENST00000587988 EDEM3Q9BZQ6 932 aa11.36□□□□□ -0.59
SMARCA4-213ENST00000587988 GRPEL1Q9HAV7 217 aa11.36□□□□□ -0.59
SMARCA4-213ENST00000587988 ABCB6Q9NP58 842 aa11.36□□□□□ -0.59
SMARCA4-213ENST00000587988 KRT82Q9NSB4 513 aa11.36□□□□□ -0.59
SMARCA4-213ENST00000587988 TSPAN16Q9UKR8 245 aa11.36□□□□□ -0.59
SMARCA4-213ENST00000587988 KIAA1257Q9ULG3 409 aa11.36□□□□□ -0.59
SMARCA4-213ENST00000587988 MAFFQ9ULX9 164 aa11.36□□□□□ -0.59
SMARCA4-213ENST00000587988 CAPN11Q9UMQ6 739 aa11.36□□□□□ -0.59
SMARCA4-213ENST00000587988 YIPF1Q9Y548 306 aa11.36□□□□□ -0.59
SMARCA4-213ENST00000587988 INSL5Q9Y5Q6 135 aa11.36□□□□□ -0.59
SMARCA4-213ENST00000587988 MYH10P35580 1976 aa11.36□□□□□ -0.59
SMARCA4-213ENST00000587988 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.35□□□□□ -0.59
SMARCA4-213ENST00000587988 CCDC195A0A1B0GUA6 201 aa11.35□□□□□ -0.59
SMARCA4-213ENST00000587988 A0A1W2PQJ5 194 aa11.35□□□□□ -0.59
SMARCA4-213ENST00000587988 O00370 1275 aa11.35□□□□□ -0.59
SMARCA4-213ENST00000587988 CCL16O15467 120 aa11.35□□□□□ -0.59
SMARCA4-213ENST00000587988 THAP12O43422 761 aa11.35□□□□□ -0.59
SMARCA4-213ENST00000587988 NCK2O43639 380 aa11.35□□□□□ -0.59
SMARCA4-213ENST00000587988 AP1G2O75843 785 aa11.35□□□□□ -0.59
SMARCA4-213ENST00000587988 MICAL2O94851 1124 aa11.35□□□□□ -0.59
SMARCA4-213ENST00000587988 ADCY5O95622 1261 aa11.35□□□□□ -0.59
SMARCA4-213ENST00000587988 CYP11B1P15538 503 aa11.35□□□□□ -0.59
SMARCA4-213ENST00000587988 ATF6P18850 670 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms