RNA–Protein interactions for RNA: ENST00000586558.5

DDX39A-204, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 1,127 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-204ENST00000586558 KIAA1257Q9ULG3 409 aa20.38■□□□□ 0.85
DDX39A-204ENST00000586558 PCDHB4Q9Y5E5 795 aa20.38■□□□□ 0.85
DDX39A-204ENST00000586558 A0A1W2PQC6 194 aa20.37■□□□□ 0.85
DDX39A-204ENST00000586558 UCHL3P15374 230 aa20.37■□□□□ 0.85
DDX39A-204ENST00000586558 RPL10AP62906 217 aaKnown RBP20.37■□□□□ 0.85
DDX39A-204ENST00000586558 APBA1Q02410 837 aa20.37■□□□□ 0.85
DDX39A-204ENST00000586558 ORC1Q13415 861 aa20.37■□□□□ 0.85
DDX39A-204ENST00000586558 MGAT5BQ3V5L5 792 aa20.37■□□□□ 0.85
DDX39A-204ENST00000586558 ZNF394Q53GI3 561 aa20.37■□□□□ 0.85
DDX39A-204ENST00000586558 GJB7Q6PEY0 223 aa20.37■□□□□ 0.85
DDX39A-204ENST00000586558 TMEM270Q6UE05 265 aa20.37■□□□□ 0.85
DDX39A-204ENST00000586558 TMC5Q6UXY8 1006 aa20.37■□□□□ 0.85
DDX39A-204ENST00000586558 GPR149Q86SP6 731 aa20.37■□□□□ 0.85
DDX39A-204ENST00000586558 ELMOD1Q8N336 334 aa20.37■□□□□ 0.85
DDX39A-204ENST00000586558 TTC9BQ8N6N2 239 aa20.37■□□□□ 0.85
DDX39A-204ENST00000586558 SHC3Q92529 594 aa20.37■□□□□ 0.85
DDX39A-204ENST00000586558 ZNF707Q96C28 371 aaPredicted RBP20.37■□□□□ 0.85
DDX39A-204ENST00000586558 CEP295NLQ96MC4 621 aa20.37■□□□□ 0.85
DDX39A-204ENST00000586558 RIPOR3Q96MK2 946 aa20.37■□□□□ 0.85
DDX39A-204ENST00000586558 SEPT5Q99719 369 aaPredicted RBP20.37■□□□□ 0.85
DDX39A-204ENST00000586558 B3GNT5Q9BYG0 378 aa20.37■□□□□ 0.85
DDX39A-204ENST00000586558 DNAJC12Q9UKB3 198 aa20.37■□□□□ 0.85
DDX39A-204ENST00000586558 FAM50BQ9Y247 325 aa20.37■□□□□ 0.85
DDX39A-204ENST00000586558 SLC27A5Q9Y2P5 690 aa20.37■□□□□ 0.85
DDX39A-204ENST00000586558 ASB3Q9Y575 518 aa20.37■□□□□ 0.85
DDX39A-204ENST00000586558 TPM3P06753 285 aa20.36■□□□□ 0.85
DDX39A-204ENST00000586558 MTHFRP42898 656 aa20.36■□□□□ 0.85
DDX39A-204ENST00000586558 ZNF132P52740 706 aa20.36■□□□□ 0.85
DDX39A-204ENST00000586558 EPHB3P54753 998 aa20.36■□□□□ 0.85
DDX39A-204ENST00000586558 UBASH3AP57075 661 aa20.36■□□□□ 0.85
DDX39A-204ENST00000586558 TWF1Q12792 350 aa20.36■□□□□ 0.85
DDX39A-204ENST00000586558 FAM35AQ86V20 835 aa20.36■□□□□ 0.85
DDX39A-204ENST00000586558 FUKQ8N0W3 1084 aa20.36■□□□□ 0.85
DDX39A-204ENST00000586558 RBBP8NLQ8NC74 664 aaPredicted RBP20.36■□□□□ 0.85
DDX39A-204ENST00000586558 NEK11Q8NG66 645 aa20.36■□□□□ 0.85
DDX39A-204ENST00000586558 SMG7Q92540 1137 aaKnown RBP20.36■□□□□ 0.85
DDX39A-204ENST00000586558 PCMTD1Q96MG8 357 aaPredicted RBP20.36■□□□□ 0.85
DDX39A-204ENST00000586558 HEXIM2Q96MH2 286 aaKnown RBP20.36■□□□□ 0.85
DDX39A-204ENST00000586558 NAP1L5Q96NT1 182 aaPredicted RBP20.36■□□□□ 0.85
DDX39A-204ENST00000586558 HNRNPABQ99729 332 aaKnown RBP20.36■□□□□ 0.85
DDX39A-204ENST00000586558 GANQ9H2C0 597 aa20.36■□□□□ 0.85
DDX39A-204ENST00000586558 PRDM6Q9NQX0 595 aa20.36■□□□□ 0.85
DDX39A-204ENST00000586558 FAM207AQ9NSI2 230 aaPredicted RBP20.36■□□□□ 0.85
DDX39A-204ENST00000586558 TEX33O43247 280 aa20.35■□□□□ 0.85
DDX39A-204ENST00000586558 KRT5P13647 590 aa20.35■□□□□ 0.85
DDX39A-204ENST00000586558 BDNFP23560 247 aa20.35■□□□□ 0.85
DDX39A-204ENST00000586558 CYP2F1P24903 491 aa20.35■□□□□ 0.85
DDX39A-204ENST00000586558 NR1I3Q14994 352 aa20.35■□□□□ 0.85
DDX39A-204ENST00000586558 VEPH1Q14D04 833 aa20.35■□□□□ 0.85
DDX39A-204ENST00000586558 CLUL1Q15846 466 aa20.35■□□□□ 0.85
DDX39A-204ENST00000586558 ARHGAP44Q17R89 818 aa20.35■□□□□ 0.85
DDX39A-204ENST00000586558 ATAT1Q5SQI0 421 aa20.35■□□□□ 0.85
DDX39A-204ENST00000586558 IQCEQ6IPM2 695 aa20.35■□□□□ 0.85
DDX39A-204ENST00000586558 ITIH5Q86UX2 942 aa20.35■□□□□ 0.85
DDX39A-204ENST00000586558 C12orf29Q8N999 325 aa20.35■□□□□ 0.85
DDX39A-204ENST00000586558 SLC2A14Q8TDB8 520 aa20.35■□□□□ 0.85
DDX39A-204ENST00000586558 ATXN2LQ8WWM7 1075 aaKnown RBP20.35■□□□□ 0.85
DDX39A-204ENST00000586558 CYFIP2Q96F07 1278 aa20.35■□□□□ 0.85
DDX39A-204ENST00000586558 SMARCD1Q96GM5 515 aa20.35■□□□□ 0.85
DDX39A-204ENST00000586558 NECTIN4Q96NY8 510 aa20.35■□□□□ 0.85
DDX39A-204ENST00000586558 LPIN3Q9BQK8 851 aa20.35■□□□□ 0.85
DDX39A-204ENST00000586558 MED10Q9BTT4 135 aa20.35■□□□□ 0.85
DDX39A-204ENST00000586558 NAA15Q9BXJ9 866 aaKnown RBP20.35■□□□□ 0.85
DDX39A-204ENST00000586558 ZNF518BQ9C0D4 1074 aa20.35■□□□□ 0.85
DDX39A-204ENST00000586558 PIDD1Q9HB75 910 aa20.35■□□□□ 0.85
DDX39A-204ENST00000586558 FAM49BQ9NUQ9 324 aa20.35■□□□□ 0.85
DDX39A-204ENST00000586558 USP15Q9Y4E8 981 aaPredicted RBP20.35■□□□□ 0.85
DDX39A-204ENST00000586558 FHOD1Q9Y613 1164 aa20.35■□□□□ 0.85
DDX39A-204ENST00000586558 MTCL1Q9Y4B5 1905 aaKnown RBP20.35■□□□□ 0.85
DDX39A-204ENST00000586558 REV3LO60673 3130 aa20.35■□□□□ 0.85
DDX39A-204ENST00000586558 TRIM66O15016 1216 aa20.34■□□□□ 0.85
DDX39A-204ENST00000586558 CCL16O15467 120 aa20.34■□□□□ 0.85
DDX39A-204ENST00000586558 NOL4O94818 638 aa20.34■□□□□ 0.85
DDX39A-204ENST00000586558 VDRP11473 427 aa20.34■□□□□ 0.85
DDX39A-204ENST00000586558 CCDC130P13994 396 aa20.34■□□□□ 0.85
DDX39A-204ENST00000586558 TFF2Q03403 129 aa20.34■□□□□ 0.85
DDX39A-204ENST00000586558 SGO2Q562F6 1265 aa20.34■□□□□ 0.85
DDX39A-204ENST00000586558 ARHGAP17Q68EM7 881 aa20.34■□□□□ 0.85
DDX39A-204ENST00000586558 SUSD6Q92537 303 aa20.34■□□□□ 0.85
DDX39A-204ENST00000586558 C8orf48Q96LL4 319 aa20.34■□□□□ 0.85
DDX39A-204ENST00000586558 APOL5Q9BWW9 433 aa20.34■□□□□ 0.85
DDX39A-204ENST00000586558 STK33Q9BYT3 514 aa20.34■□□□□ 0.85
DDX39A-204ENST00000586558 CEP72Q9P209 647 aa20.34■□□□□ 0.85
DDX39A-204ENST00000586558 CBFA2T2O43439 604 aa20.33■□□□□ 0.85
DDX39A-204ENST00000586558 MBTPS2O43462 519 aa20.33■□□□□ 0.85
DDX39A-204ENST00000586558 CD19P15391 556 aa20.33■□□□□ 0.85
DDX39A-204ENST00000586558 ATF6P18850 670 aa20.33■□□□□ 0.85
DDX39A-204ENST00000586558 ANXA13P27216 316 aa20.33■□□□□ 0.85
DDX39A-204ENST00000586558 KLK7P49862 253 aa20.33■□□□□ 0.85
DDX39A-204ENST00000586558 CDR1P51861 262 aa20.33■□□□□ 0.85
DDX39A-204ENST00000586558 MRPS5P82675 430 aaKnown RBP20.33■□□□□ 0.85
DDX39A-204ENST00000586558 RAPGEF1Q13905 1077 aa20.33■□□□□ 0.85
DDX39A-204ENST00000586558 STILQ15468 1287 aa20.33■□□□□ 0.85
DDX39A-204ENST00000586558 PAQR9Q6ZVX9 377 aa20.33■□□□□ 0.85
DDX39A-204ENST00000586558 SCN4BQ8IWT1 228 aa20.33■□□□□ 0.85
DDX39A-204ENST00000586558 LEMD2Q8NC56 503 aa20.33■□□□□ 0.85
DDX39A-204ENST00000586558 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.33■□□□□ 0.85
DDX39A-204ENST00000586558 SPATA17Q96L03 361 aa20.33■□□□□ 0.85
DDX39A-204ENST00000586558 ZNF512Q96ME7 567 aaPredicted RBP20.33■□□□□ 0.85
DDX39A-204ENST00000586558 DMAP1Q9NPF5 467 aaPredicted RBP20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms