RNA–Protein interactions for RNA: ENST00000586245.5

VMP1-203, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-203ENST00000586245 ANP32BQ92688 251 aaKnown RBP14.47□□□□□ -0.09
VMP1-203ENST00000586245 CYFIP2Q96F07 1278 aa14.47□□□□□ -0.09
VMP1-203ENST00000586245 PCED1BQ96HM7 432 aa14.47□□□□□ -0.09
VMP1-203ENST00000586245 FUBP3Q96I24 572 aaKnown RBP eCLIP14.47□□□□□ -0.09
VMP1-203ENST00000586245 CYP4F11Q9HBI6 524 aa14.47□□□□□ -0.09
VMP1-203ENST00000586245 MTMR10Q9NXD2 777 aa14.47□□□□□ -0.09
VMP1-203ENST00000586245 PRRG1O14668 218 aa14.46□□□□□ -0.09
VMP1-203ENST00000586245 NCK2O43639 380 aa14.46□□□□□ -0.09
VMP1-203ENST00000586245 SPATA31D3P0C874 917 aa14.46□□□□□ -0.09
VMP1-203ENST00000586245 CCDC130P13994 396 aa14.46□□□□□ -0.09
VMP1-203ENST00000586245 BRD2P25440 801 aaKnown RBP14.46□□□□□ -0.09
VMP1-203ENST00000586245 ADORA2BP29275 332 aa14.46□□□□□ -0.09
VMP1-203ENST00000586245 CASP14P31944 242 aa14.46□□□□□ -0.09
VMP1-203ENST00000586245 CLCN1P35523 988 aa14.46□□□□□ -0.09
VMP1-203ENST00000586245 KRT9P35527 623 aa14.46□□□□□ -0.09
VMP1-203ENST00000586245 TUFMP49411 452 aaKnown RBP14.46□□□□□ -0.09
VMP1-203ENST00000586245 CDR1P51861 262 aa14.46□□□□□ -0.09
VMP1-203ENST00000586245 ARID5AQ03989 594 aa14.46□□□□□ -0.09
VMP1-203ENST00000586245 HYAL1Q12794 435 aa14.46□□□□□ -0.09
VMP1-203ENST00000586245 DUSP4Q13115 394 aa14.46□□□□□ -0.09
VMP1-203ENST00000586245 ASIC2Q16515 512 aa14.46□□□□□ -0.09
VMP1-203ENST00000586245 CCDC142Q17RM4 750 aa14.46□□□□□ -0.09
VMP1-203ENST00000586245 MGAT5BQ3V5L5 792 aa14.46□□□□□ -0.09
VMP1-203ENST00000586245 CFAP221Q4G0U5 840 aa14.46□□□□□ -0.09
VMP1-203ENST00000586245 PPP1R26Q5T8A7 1209 aaPredicted RBP14.46□□□□□ -0.09
VMP1-203ENST00000586245 LIN9Q5TKA1 542 aa14.46□□□□□ -0.09
VMP1-203ENST00000586245 SFMBT2Q5VUG0 894 aa14.46□□□□□ -0.09
VMP1-203ENST00000586245 ARHGAP17Q68EM7 881 aa14.46□□□□□ -0.09
VMP1-203ENST00000586245 LLGL2Q6P1M3 1020 aa14.46□□□□□ -0.09
VMP1-203ENST00000586245 SPATA31D4Q6ZUB0 917 aa14.46□□□□□ -0.09
VMP1-203ENST00000586245 CCDC149Q6ZUS6 474 aa14.46□□□□□ -0.09
VMP1-203ENST00000586245 FAM35AQ86V20 835 aa14.46□□□□□ -0.09
VMP1-203ENST00000586245 ATAD1Q8NBU5 361 aa14.46□□□□□ -0.09
VMP1-203ENST00000586245 KREMEN2Q8NCW0 462 aa14.46□□□□□ -0.09
VMP1-203ENST00000586245 SLC2A14Q8TDB8 520 aa14.46□□□□□ -0.09
VMP1-203ENST00000586245 SLC22A17Q8WUG5 538 aa14.46□□□□□ -0.09
VMP1-203ENST00000586245 HDAC7Q8WUI4 952 aa14.46□□□□□ -0.09
VMP1-203ENST00000586245 GUCD1Q96NT3 240 aa14.46□□□□□ -0.09
VMP1-203ENST00000586245 HNRNPABQ99729 332 aaKnown RBP14.46□□□□□ -0.09
VMP1-203ENST00000586245 B3GNT5Q9BYG0 378 aa14.46□□□□□ -0.09
VMP1-203ENST00000586245 PLEKHA4Q9H4M7 779 aa14.46□□□□□ -0.09
VMP1-203ENST00000586245 ABCB6Q9NP58 842 aa14.46□□□□□ -0.09
VMP1-203ENST00000586245 HSFX1Q9UBD0 423 aa14.46□□□□□ -0.09
VMP1-203ENST00000586245 HESX1Q9UBX0 185 aa14.46□□□□□ -0.09
VMP1-203ENST00000586245 FBXW11Q9UKB1 542 aa14.46□□□□□ -0.09
VMP1-203ENST00000586245 HCFC2Q9Y5Z7 792 aa14.46□□□□□ -0.09
VMP1-203ENST00000586245 GOLGA6L6A8MZA4 724 aa14.45□□□□□ -0.1
VMP1-203ENST00000586245 CLDN5O00501 218 aa14.45□□□□□ -0.1
VMP1-203ENST00000586245 EPCAMP16422 314 aa14.45□□□□□ -0.1
VMP1-203ENST00000586245 BDNFP23560 247 aa14.45□□□□□ -0.1
VMP1-203ENST00000586245 SLC8A3P57103 927 aa14.45□□□□□ -0.1
VMP1-203ENST00000586245 MYO9BQ13459 2157 aa14.45□□□□□ -0.1
VMP1-203ENST00000586245 CNGA2Q16280 664 aa14.45□□□□□ -0.1
VMP1-203ENST00000586245 TSR1Q2NL82 804 aaKnown RBP14.45□□□□□ -0.1
VMP1-203ENST00000586245 VSTM1Q6UX27 236 aa14.45□□□□□ -0.1
VMP1-203ENST00000586245 SLC47A2Q86VL8 602 aa14.45□□□□□ -0.1
VMP1-203ENST00000586245 CNGA4Q8IV77 575 aa14.45□□□□□ -0.1
VMP1-203ENST00000586245 TCEAL8Q8IYN2 117 aa14.45□□□□□ -0.1
VMP1-203ENST00000586245 FUKQ8N0W3 1084 aa14.45□□□□□ -0.1
VMP1-203ENST00000586245 EFHBQ8N7U6 833 aa14.45□□□□□ -0.1
VMP1-203ENST00000586245 CASP10Q92851 521 aa14.45□□□□□ -0.1
VMP1-203ENST00000586245 SMARCD1Q96GM5 515 aa14.45□□□□□ -0.1
VMP1-203ENST00000586245 SEPT5Q99719 369 aaPredicted RBP14.45□□□□□ -0.1
VMP1-203ENST00000586245 ZNF518BQ9C0D4 1074 aa14.45□□□□□ -0.1
VMP1-203ENST00000586245 PDCL3Q9H2J4 239 aa14.45□□□□□ -0.1
VMP1-203ENST00000586245 MAN1C1Q9NR34 630 aa14.45□□□□□ -0.1
VMP1-203ENST00000586245 SLC27A5Q9Y2P5 690 aa14.45□□□□□ -0.1
VMP1-203ENST00000586245 ATG2AQ2TAZ0 1938 aa14.45□□□□□ -0.1
VMP1-203ENST00000586245 AKR1B15C9JRZ8 316 aaPredicted RBP14.44□□□□□ -0.1
VMP1-203ENST00000586245 O00370 1275 aa14.44□□□□□ -0.1
VMP1-203ENST00000586245 MFAP3LO75121 409 aa14.44□□□□□ -0.1
VMP1-203ENST00000586245 AP1G2O75843 785 aa14.44□□□□□ -0.1
VMP1-203ENST00000586245 SEC24AO95486 1093 aa14.44□□□□□ -0.1
VMP1-203ENST00000586245 VNN2O95498 520 aa14.44□□□□□ -0.1
VMP1-203ENST00000586245 CALCAP01258 141 aa14.44□□□□□ -0.1
VMP1-203ENST00000586245 C8AP07357 584 aa14.44□□□□□ -0.1
VMP1-203ENST00000586245 FAM200BP0CF97 657 aa14.44□□□□□ -0.1
VMP1-203ENST00000586245 HAPLN1P10915 354 aaPredicted RBP14.44□□□□□ -0.1
VMP1-203ENST00000586245 CYP11B1P15538 503 aa14.44□□□□□ -0.1
VMP1-203ENST00000586245 CYP2F1P24903 491 aa14.44□□□□□ -0.1
VMP1-203ENST00000586245 GTF2F1P35269 517 aaKnown RBP eCLIP14.44□□□□□ -0.1
VMP1-203ENST00000586245 MAGEA11P43364 429 aa14.44□□□□□ -0.1
VMP1-203ENST00000586245 ALDH1A3P47895 512 aa14.44□□□□□ -0.1
VMP1-203ENST00000586245 RPL10AP62906 217 aaKnown RBP14.44□□□□□ -0.1
VMP1-203ENST00000586245 TBX2Q13207 712 aaPredicted RBP14.44□□□□□ -0.1
VMP1-203ENST00000586245 GOLGA7BQ2TAP0 167 aa14.44□□□□□ -0.1
VMP1-203ENST00000586245 PPM1LQ5SGD2 360 aa14.44□□□□□ -0.1
VMP1-203ENST00000586245 LCLAT1Q6UWP7 414 aa14.44□□□□□ -0.1
VMP1-203ENST00000586245 RTL10Q7L3V2 364 aa14.44□□□□□ -0.1
VMP1-203ENST00000586245 GPIHBP1Q8IV16 184 aa14.44□□□□□ -0.1
VMP1-203ENST00000586245 SCN4BQ8IWT1 228 aa14.44□□□□□ -0.1
VMP1-203ENST00000586245 OR8K1Q8NGG5 319 aa14.44□□□□□ -0.1
VMP1-203ENST00000586245 SLC7A14Q8TBB6 771 aa14.44□□□□□ -0.1
VMP1-203ENST00000586245 EPS8L1Q8TE68 723 aa14.44□□□□□ -0.1
VMP1-203ENST00000586245 ZNF606Q8WXB4 792 aa14.44□□□□□ -0.1
VMP1-203ENST00000586245 TFAP2BQ92481 460 aa14.44□□□□□ -0.1
VMP1-203ENST00000586245 SYN2Q92777 582 aaPredicted RBP14.44□□□□□ -0.1
VMP1-203ENST00000586245 ACP6Q9NPH0 428 aa14.44□□□□□ -0.1
VMP1-203ENST00000586245 KRT82Q9NSB4 513 aa14.44□□□□□ -0.1
VMP1-203ENST00000586245 DZANK1Q9NVP4 752 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms