RNA–Protein interactions for RNA: ENST00000585265.1

PSMD11-211, Transcript of proteasome 26S subunit, non-ATPase 11, human

TSL 2

Gene PSMD11, Length 670 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD11-211	ENST00000585265	GAD1	Q99259	594 aa		12.8	□□□□□ -0.36
PSMD11-211	ENST00000585265	S1PR5	Q9H228	398 aa		12.8	□□□□□ -0.36
PSMD11-211	ENST00000585265	CXCL16	Q9H2A7	254 aa		12.8	□□□□□ -0.36
PSMD11-211	ENST00000585265	PDCL3	Q9H2J4	239 aa		12.8	□□□□□ -0.36
PSMD11-211	ENST00000585265	SMYD3	Q9H7B4	428 aa		12.8	□□□□□ -0.36
PSMD11-211	ENST00000585265	UBN1	Q9NPG3	1134 aa		12.8	□□□□□ -0.36
PSMD11-211	ENST00000585265	ACP6	Q9NPH0	428 aa		12.8	□□□□□ -0.36
PSMD11-211	ENST00000585265	KANSL3	Q9P2N6	904 aa		12.8	□□□□□ -0.36
PSMD11-211	ENST00000585265	HCFC2	Q9Y5Z7	792 aa		12.8	□□□□□ -0.36
PSMD11-211	ENST00000585265	DUSP10	Q9Y6W6	482 aa		12.8	□□□□□ -0.36
PSMD11-211	ENST00000585265	ATP8B3	O60423	1300 aa		12.8	□□□□□ -0.36
PSMD11-211	ENST00000585265	PDCD11	Q14690	1871 aa	Known RBP	12.8	□□□□□ -0.36
PSMD11-211	ENST00000585265	TRIP11	Q15643	1979 aa		12.8	□□□□□ -0.36
PSMD11-211	ENST00000585265	SMIM28	A0A1B0GU29	152 aa		12.79	□□□□□ -0.36
PSMD11-211	ENST00000585265	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	12.79	□□□□□ -0.36
PSMD11-211	ENST00000585265	CTAGE9	A4FU28	777 aa		12.79	□□□□□ -0.36
PSMD11-211	ENST00000585265	CARNS1	A5YM72	827 aa		12.79	□□□□□ -0.36
PSMD11-211	ENST00000585265	ARL5C	A6NH57	179 aa		12.79	□□□□□ -0.36
PSMD11-211	ENST00000585265	NRP1	O14786	923 aa		12.79	□□□□□ -0.36
PSMD11-211	ENST00000585265	THAP12	O43422	761 aa		12.79	□□□□□ -0.36
PSMD11-211	ENST00000585265	DCX	O43602	365 aa		12.79	□□□□□ -0.36
PSMD11-211	ENST00000585265	URI1	O94763	535 aa	Predicted RBP	12.79	□□□□□ -0.36
PSMD11-211	ENST00000585265	MOCS3	O95396	460 aa		12.79	□□□□□ -0.36
PSMD11-211	ENST00000585265	MME	P08473	750 aa		12.79	□□□□□ -0.36
PSMD11-211	ENST00000585265	WEE2	P0C1S8	567 aa		12.79	□□□□□ -0.36
PSMD11-211	ENST00000585265	SRGAP2B	P0DMP2	458 aa		12.79	□□□□□ -0.36
PSMD11-211	ENST00000585265	CTSA	P10619	480 aa		12.79	□□□□□ -0.36
PSMD11-211	ENST00000585265	KCNE1	P15382	129 aa		12.79	□□□□□ -0.36
PSMD11-211	ENST00000585265	GNA15	P30679	374 aa		12.79	□□□□□ -0.36
PSMD11-211	ENST00000585265	MLH1	P40692	756 aa		12.79	□□□□□ -0.36
PSMD11-211	ENST00000585265	ASPA	P45381	313 aa		12.79	□□□□□ -0.36
PSMD11-211	ENST00000585265	RAP1GAP	P47736	663 aa		12.79	□□□□□ -0.36
PSMD11-211	ENST00000585265	SCNN1G	P51170	649 aa		12.79	□□□□□ -0.36
PSMD11-211	ENST00000585265	FMO1	Q01740	532 aa		12.79	□□□□□ -0.36
PSMD11-211	ENST00000585265	MYO1E	Q12965	1108 aa		12.79	□□□□□ -0.36
PSMD11-211	ENST00000585265	WDR72	Q3MJ13	1102 aa		12.79	□□□□□ -0.36
PSMD11-211	ENST00000585265	PALB2	Q86YC2	1186 aa		12.79	□□□□□ -0.36
PSMD11-211	ENST00000585265	RNF135	Q8IUD6	432 aa		12.79	□□□□□ -0.36
PSMD11-211	ENST00000585265	CXorf38	Q8TB03	319 aa		12.79	□□□□□ -0.36
PSMD11-211	ENST00000585265	SUSD6	Q92537	303 aa		12.79	□□□□□ -0.36
PSMD11-211	ENST00000585265	ZFP42	Q96MM3	310 aa		12.79	□□□□□ -0.36
PSMD11-211	ENST00000585265	NOX5	Q96PH1	765 aa		12.79	□□□□□ -0.36
PSMD11-211	ENST00000585265	ALS2CR12	Q96Q35	445 aa		12.79	□□□□□ -0.36
PSMD11-211	ENST00000585265	RPS6KC1	Q96S38	1066 aa		12.79	□□□□□ -0.36
PSMD11-211	ENST00000585265	TSPAN18	Q96SJ8	248 aa		12.79	□□□□□ -0.36
PSMD11-211	ENST00000585265	NAPG	Q99747	312 aa	Predicted RBP	12.79	□□□□□ -0.36
PSMD11-211	ENST00000585265	TMEM175	Q9BSA9	504 aa		12.79	□□□□□ -0.36
PSMD11-211	ENST00000585265	CISH	Q9NSE2	258 aa		12.79	□□□□□ -0.36
PSMD11-211	ENST00000585265	TAS2R14	Q9NYV8	317 aa		12.79	□□□□□ -0.36
PSMD11-211	ENST00000585265	INTU	Q9ULD6	942 aa		12.79	□□□□□ -0.36
PSMD11-211	ENST00000585265	CNTN6	Q9UQ52	1028 aa		12.79	□□□□□ -0.36
PSMD11-211	ENST00000585265	FAN1	Q9Y2M0	1017 aa		12.79	□□□□□ -0.36
PSMD11-211	ENST00000585265	LOC730098	B7Z3J9	87 aa		12.78	□□□□□ -0.36
PSMD11-211	ENST00000585265	INPPL1	O15357	1258 aa		12.78	□□□□□ -0.36
PSMD11-211	ENST00000585265	BUB1	O43683	1085 aa		12.78	□□□□□ -0.36
PSMD11-211	ENST00000585265	STAU1	O95793	577 aa	Known RBP	12.78	□□□□□ -0.36
PSMD11-211	ENST00000585265	TMEM253	P0C7T8	217 aa		12.78	□□□□□ -0.36
PSMD11-211	ENST00000585265	GALC	P54803	685 aa		12.78	□□□□□ -0.36
PSMD11-211	ENST00000585265	ZBTB6	Q15916	424 aa		12.78	□□□□□ -0.36
PSMD11-211	ENST00000585265	ALKAL1	Q6UXT8	129 aa		12.78	□□□□□ -0.36
PSMD11-211	ENST00000585265	ZNF677	Q86XU0	584 aa		12.78	□□□□□ -0.36
PSMD11-211	ENST00000585265	COLGALT2	Q8IYK4	626 aa		12.78	□□□□□ -0.36
PSMD11-211	ENST00000585265	CTNNBL1	Q8WYA6	563 aa	Predicted RBP	12.78	□□□□□ -0.36
PSMD11-211	ENST00000585265	CASP10	Q92851	521 aa		12.78	□□□□□ -0.36
PSMD11-211	ENST00000585265	FAXDC2	Q96IV6	333 aa		12.78	□□□□□ -0.36
PSMD11-211	ENST00000585265	RPGRIP1	Q96KN7	1286 aa		12.78	□□□□□ -0.36
PSMD11-211	ENST00000585265	PCDHB18P	Q96TA0	734 aa		12.78	□□□□□ -0.36
PSMD11-211	ENST00000585265	PHF7	Q9BWX1	381 aa	Predicted RBP	12.78	□□□□□ -0.36
PSMD11-211	ENST00000585265	BCO2	Q9BYV7	579 aa		12.78	□□□□□ -0.36
PSMD11-211	ENST00000585265	VRTN	Q9H8Y1	702 aa		12.78	□□□□□ -0.36
PSMD11-211	ENST00000585265	CYP3A43	Q9HB55	503 aa		12.78	□□□□□ -0.36
PSMD11-211	ENST00000585265	MARCH5	Q9NX47	278 aa		12.78	□□□□□ -0.36
PSMD11-211	ENST00000585265	MUTYH	Q9UIF7	546 aa		12.78	□□□□□ -0.36
PSMD11-211	ENST00000585265	CDH22	Q9UJ99	828 aa		12.78	□□□□□ -0.36
PSMD11-211	ENST00000585265	GIT1	Q9Y2X7	761 aa		12.78	□□□□□ -0.36
PSMD11-211	ENST00000585265	PRG3	Q9Y2Y8	225 aa	Predicted RBP	12.78	□□□□□ -0.36
PSMD11-211	ENST00000585265	IRAK3	Q9Y616	596 aa		12.78	□□□□□ -0.36
PSMD11-211	ENST00000585265	PLXNA3	P51805	1871 aa		12.78	□□□□□ -0.36
PSMD11-211	ENST00000585265	MYO10	Q9HD67	2058 aa		12.77	□□□□□ -0.36
PSMD11-211	ENST00000585265	BTNL10	A8MVZ5	291 aa		12.77	□□□□□ -0.37
PSMD11-211	ENST00000585265	RIOK3	O14730	519 aa	Known RBP	12.77	□□□□□ -0.37
PSMD11-211	ENST00000585265	PPEF2	O14830	753 aa		12.77	□□□□□ -0.37
PSMD11-211	ENST00000585265	FANCG	O15287	622 aa		12.77	□□□□□ -0.37
PSMD11-211	ENST00000585265	RTN2	O75298	545 aa		12.77	□□□□□ -0.37
PSMD11-211	ENST00000585265	EPCAM	P16422	314 aa		12.77	□□□□□ -0.37
PSMD11-211	ENST00000585265	HOXB8	P17481	243 aa	Predicted RBP	12.77	□□□□□ -0.37
PSMD11-211	ENST00000585265	ABCB4	P21439	1286 aa		12.77	□□□□□ -0.37
PSMD11-211	ENST00000585265	NOP2	P46087	812 aa	Known RBP	12.77	□□□□□ -0.37
PSMD11-211	ENST00000585265	OR1G1	P47890	313 aa		12.77	□□□□□ -0.37
PSMD11-211	ENST00000585265	ZNF132	P52740	706 aa		12.77	□□□□□ -0.37
PSMD11-211	ENST00000585265	CBX2	Q14781	532 aa	Predicted RBP	12.77	□□□□□ -0.37
PSMD11-211	ENST00000585265	CLEC16A	Q2KHT3	1053 aa		12.77	□□□□□ -0.37
PSMD11-211	ENST00000585265	ZNF394	Q53GI3	561 aa		12.77	□□□□□ -0.37
PSMD11-211	ENST00000585265	XKR4	Q5GH76	650 aa		12.77	□□□□□ -0.37
PSMD11-211	ENST00000585265	C9orf57	Q5W0N0	161 aa		12.77	□□□□□ -0.37
PSMD11-211	ENST00000585265	TRIM72	Q6ZMU5	477 aa		12.77	□□□□□ -0.37
PSMD11-211	ENST00000585265	RNF10	Q8N5U6	811 aa	Known RBP	12.77	□□□□□ -0.37
PSMD11-211	ENST00000585265	LRRC52	Q8N7C0	313 aa		12.77	□□□□□ -0.37
PSMD11-211	ENST00000585265	GSTCD	Q8NEC7	633 aa		12.77	□□□□□ -0.37
PSMD11-211	ENST00000585265	TRIM58	Q8NG06	486 aa		12.77	□□□□□ -0.37

Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms