RNA–Protein interactions for RNA: ENST00000584437.5

RNF43-208, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 5,575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-208ENST00000584437 SELENONQ9NZV5 590 aa13.56□□□□□ -0.24
RNF43-208ENST00000584437 ZMYND8Q9ULU4 1186 aaPredicted RBP13.56□□□□□ -0.24
RNF43-208ENST00000584437 SNX9Q9Y5X1 595 aa13.56□□□□□ -0.24
RNF43-208ENST00000584437 FAM58BPP0C7Q3 252 aa13.56□□□□□ -0.24
RNF43-208ENST00000584437 GZMAP12544 262 aa13.56□□□□□ -0.24
RNF43-208ENST00000584437 ZNF23P17027 643 aa13.56□□□□□ -0.24
RNF43-208ENST00000584437 KDELC2Q7Z4H8 507 aa13.56□□□□□ -0.24
RNF43-208ENST00000584437 TMPRSS6Q8IU80 811 aa13.56□□□□□ -0.24
RNF43-208ENST00000584437 OPTNQ96CV9 577 aa13.56□□□□□ -0.24
RNF43-208ENST00000584437 NMD3Q96D46 503 aaKnown RBP13.56□□□□□ -0.24
RNF43-208ENST00000584437 COL15A1P39059 1388 aa13.55□□□□□ -0.24
RNF43-208ENST00000584437 F8VZ95 297 aa13.55□□□□□ -0.24
RNF43-208ENST00000584437 RNF103O00237 685 aa13.55□□□□□ -0.24
RNF43-208ENST00000584437 MAP3K13O43283 966 aa13.55□□□□□ -0.24
RNF43-208ENST00000584437 RFC5P40937 340 aa13.55□□□□□ -0.24
RNF43-208ENST00000584437 ZC2HC1CQ53FD0 456 aaPredicted RBP13.55□□□□□ -0.24
RNF43-208ENST00000584437 FBXO36Q8NEA4 188 aa13.55□□□□□ -0.24
RNF43-208ENST00000584437 FAM192AQ9GZU8 254 aa13.55□□□□□ -0.24
RNF43-208ENST00000584437 CATSPERBQ9H7T0 1116 aa13.55□□□□□ -0.24
RNF43-208ENST00000584437 LATS2Q9NRM7 1088 aa13.55□□□□□ -0.24
RNF43-208ENST00000584437 FSBPO95073 299 aa13.55□□□□□ -0.24
RNF43-208ENST00000584437 CYP2C8P10632 490 aa13.55□□□□□ -0.24
RNF43-208ENST00000584437 PON1P27169 355 aa13.55□□□□□ -0.24
RNF43-208ENST00000584437 MKRN4PQ13434 485 aaPredicted RBP13.55□□□□□ -0.24
RNF43-208ENST00000584437 DENND1BQ6P3S1 775 aa13.55□□□□□ -0.24
RNF43-208ENST00000584437 DIS3LQ8TF46 1054 aaKnown RBP13.55□□□□□ -0.24
RNF43-208ENST00000584437 NYAP2Q9P242 653 aa13.55□□□□□ -0.24
RNF43-208ENST00000584437 PCDHB8Q9UN66 801 aa13.55□□□□□ -0.24
RNF43-208ENST00000584437 CES2O00748 559 aa13.55□□□□□ -0.24
RNF43-208ENST00000584437 AQP5P55064 265 aa13.55□□□□□ -0.24
RNF43-208ENST00000584437 MCL1Q07820 350 aa13.55□□□□□ -0.24
RNF43-208ENST00000584437 ARMCX4Q5H9R4 360 aa13.55□□□□□ -0.24
RNF43-208ENST00000584437 CDKAL1Q5VV42 579 aa13.55□□□□□ -0.24
RNF43-208ENST00000584437 TRIM65Q6PJ69 517 aa13.55□□□□□ -0.24
RNF43-208ENST00000584437 HDDC2Q7Z4H3 204 aa13.55□□□□□ -0.24
RNF43-208ENST00000584437 HPS5Q9UPZ3 1129 aa13.55□□□□□ -0.24
RNF43-208ENST00000584437 ITM2BQ9Y287 266 aa13.55□□□□□ -0.24
RNF43-208ENST00000584437 MAP3K4Q9Y6R4 1608 aa13.55□□□□□ -0.24
RNF43-208ENST00000584437 IGSF9BQ9UPX0 1349 aa13.55□□□□□ -0.24
RNF43-208ENST00000584437 TPST1O60507 370 aa13.55□□□□□ -0.24
RNF43-208ENST00000584437 IMPDH2P12268 514 aa13.55□□□□□ -0.24
RNF43-208ENST00000584437 MLH1P40692 756 aa13.55□□□□□ -0.24
RNF43-208ENST00000584437 NKX1-1Q15270 411 aaPredicted RBP13.55□□□□□ -0.24
RNF43-208ENST00000584437 SEL1L3Q68CR1 1132 aa13.55□□□□□ -0.24
RNF43-208ENST00000584437 IRGCQ6NXR0 463 aa13.55□□□□□ -0.24
RNF43-208ENST00000584437 SLC26A11Q86WA9 606 aa13.55□□□□□ -0.24
RNF43-208ENST00000584437 USP33Q8TEY7 942 aa13.55□□□□□ -0.24
RNF43-208ENST00000584437 ATP8B4Q8TF62 1192 aa13.55□□□□□ -0.24
RNF43-208ENST00000584437 TFB1MQ8WVM0 346 aaKnown RBP13.55□□□□□ -0.24
RNF43-208ENST00000584437 ANXA9O76027 345 aa13.54□□□□□ -0.24
RNF43-208ENST00000584437 ATP5BP06576 529 aaKnown RBP13.54□□□□□ -0.24
RNF43-208ENST00000584437 GTF2H1P32780 548 aa13.54□□□□□ -0.24
RNF43-208ENST00000584437 PLEKHA7Q6IQ23 1121 aa13.54□□□□□ -0.24
RNF43-208ENST00000584437 ARHGAP22Q7Z5H3 698 aa13.54□□□□□ -0.24
RNF43-208ENST00000584437 PIK3R5Q8WYR1 880 aa13.54□□□□□ -0.24
RNF43-208ENST00000584437 PAFAH2Q99487 392 aa13.54□□□□□ -0.24
RNF43-208ENST00000584437 SHCBP1LQ9BZQ2 653 aa13.54□□□□□ -0.24
RNF43-208ENST00000584437 DUSP10Q9Y6W6 482 aa13.54□□□□□ -0.24
RNF43-208ENST00000584437 IQCA1LA6NCM1 817 aa13.54□□□□□ -0.24
RNF43-208ENST00000584437 FBXW4P57775 412 aa13.54□□□□□ -0.24
RNF43-208ENST00000584437 GLMNQ92990 594 aa13.54□□□□□ -0.24
RNF43-208ENST00000584437 HES6Q96HZ4 224 aa13.54□□□□□ -0.24
RNF43-208ENST00000584437 SNTNA6NMZ2 147 aa13.54□□□□□ -0.24
RNF43-208ENST00000584437 MUTP22033 750 aa13.54□□□□□ -0.24
RNF43-208ENST00000584437 TTI2Q6NXR4 508 aa13.54□□□□□ -0.24
RNF43-208ENST00000584437 MTERF3Q96E29 417 aa13.54□□□□□ -0.24
RNF43-208ENST00000584437 SH3GL1Q99961 368 aa13.54□□□□□ -0.24
RNF43-208ENST00000584437 LACRTQ9GZZ8 138 aa13.54□□□□□ -0.24
RNF43-208ENST00000584437 CTNNAL1Q9UBT7 734 aa13.54□□□□□ -0.24
RNF43-208ENST00000584437 ADCY10Q96PN6 1610 aa13.54□□□□□ -0.24
RNF43-208ENST00000584437 CYP19A1P11511 503 aaPredicted RBP13.54□□□□□ -0.24
RNF43-208ENST00000584437 CD44P16070 742 aaKnown RBP13.54□□□□□ -0.24
RNF43-208ENST00000584437 SERPINB5P36952 375 aa13.54□□□□□ -0.24
RNF43-208ENST00000584437 PTENP60484 403 aa13.54□□□□□ -0.24
RNF43-208ENST00000584437 POU4F1Q01851 419 aa13.54□□□□□ -0.24
RNF43-208ENST00000584437 SMTNL2Q2TAL5 461 aa13.54□□□□□ -0.24
RNF43-208ENST00000584437 ZBTB49Q6ZSB9 765 aa13.54□□□□□ -0.24
RNF43-208ENST00000584437 FAM9CQ8IZT9 166 aa13.54□□□□□ -0.24
RNF43-208ENST00000584437 SLC10A4Q96EP9 437 aa13.54□□□□□ -0.24
RNF43-208ENST00000584437 AGPAT3Q9NRZ7 376 aa13.54□□□□□ -0.24
RNF43-208ENST00000584437 ANKEF1Q9NU02 776 aa13.54□□□□□ -0.24
RNF43-208ENST00000584437 GYS1P13807 737 aa13.53□□□□□ -0.24
RNF43-208ENST00000584437 CCNG2Q16589 344 aa13.53□□□□□ -0.24
RNF43-208ENST00000584437 ACCSLQ4AC99 568 aa13.53□□□□□ -0.24
RNF43-208ENST00000584437 SYTL3Q4VX76 610 aa13.53□□□□□ -0.24
RNF43-208ENST00000584437 SNX30Q5VWJ9 437 aa13.53□□□□□ -0.24
RNF43-208ENST00000584437 TAF2Q6P1X5 1199 aa13.53□□□□□ -0.24
RNF43-208ENST00000584437 LPCAT2Q7L5N7 544 aa13.53□□□□□ -0.24
RNF43-208ENST00000584437 MMADHCQ9H3L0 296 aaPredicted RBP13.53□□□□□ -0.24
RNF43-208ENST00000584437 EIF3LQ9Y262 564 aaKnown RBP13.53□□□□□ -0.24
RNF43-208ENST00000584437 DNAJC16Q9Y2G8 782 aa13.53□□□□□ -0.24
RNF43-208ENST00000584437 RGS5O15539 181 aa13.53□□□□□ -0.24
RNF43-208ENST00000584437 CYTH3O43739 400 aa13.53□□□□□ -0.24
RNF43-208ENST00000584437 ECE2O60344 883 aa13.53□□□□□ -0.24
RNF43-208ENST00000584437 CD4P01730 458 aa13.53□□□□□ -0.24
RNF43-208ENST00000584437 TFE3P19532 575 aaPredicted RBP13.53□□□□□ -0.24
RNF43-208ENST00000584437 TFDP3Q5H9I0 405 aa13.53□□□□□ -0.24
RNF43-208ENST00000584437 LRRC8DQ7L1W4 858 aa13.53□□□□□ -0.24
RNF43-208ENST00000584437 TTLL6Q8N841 843 aa13.53□□□□□ -0.24
RNF43-208ENST00000584437 WRNIP1Q96S55 665 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms