RNA–Protein interactions for RNA: ENST00000584063.5

CDK5RAP3-231, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,759 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-231ENST00000584063 GPC5P78333 572 aa12.2□□□□□ -0.46
CDK5RAP3-231ENST00000584063 KRT17Q04695 432 aa12.2□□□□□ -0.46
CDK5RAP3-231ENST00000584063 NAA25Q14CX7 972 aa12.2□□□□□ -0.46
CDK5RAP3-231ENST00000584063 SPOPLQ6IQ16 392 aa12.2□□□□□ -0.46
CDK5RAP3-231ENST00000584063 OSTM1Q86WC4 334 aa12.2□□□□□ -0.46
CDK5RAP3-231ENST00000584063 PASD1Q8IV76 773 aa12.2□□□□□ -0.46
CDK5RAP3-231ENST00000584063 ANKS4BQ8N8V4 417 aa12.2□□□□□ -0.46
CDK5RAP3-231ENST00000584063 SLC17A8Q8NDX2 589 aa12.2□□□□□ -0.46
CDK5RAP3-231ENST00000584063 CPA5Q8WXQ8 436 aa12.2□□□□□ -0.46
CDK5RAP3-231ENST00000584063 TRIM4Q9C037 500 aa12.2□□□□□ -0.46
CDK5RAP3-231ENST00000584063 SPATC1LQ9H0A9 340 aa12.2□□□□□ -0.46
CDK5RAP3-231ENST00000584063 RRAGCQ9HB90 399 aa12.2□□□□□ -0.46
CDK5RAP3-231ENST00000584063 TBC1D22BQ9NU19 505 aa12.2□□□□□ -0.46
CDK5RAP3-231ENST00000584063 NOCTQ9UK39 431 aaKnown RBP12.2□□□□□ -0.46
CDK5RAP3-231ENST00000584063 TIMM22Q9Y584 194 aa12.2□□□□□ -0.46
CDK5RAP3-231ENST00000584063 C5orf60A6NFR6 353 aa12.19□□□□□ -0.46
CDK5RAP3-231ENST00000584063 XPOTO43592 962 aaKnown RBP12.19□□□□□ -0.46
CDK5RAP3-231ENST00000584063 ZNF862O60290 1169 aa12.19□□□□□ -0.46
CDK5RAP3-231ENST00000584063 SPAG7O75391 227 aa12.19□□□□□ -0.46
CDK5RAP3-231ENST00000584063 RGS20O76081 388 aa12.19□□□□□ -0.46
CDK5RAP3-231ENST00000584063 ATP6V1G2O95670 118 aa12.19□□□□□ -0.46
CDK5RAP3-231ENST00000584063 ENDOUP21128 410 aaKnown RBP12.19□□□□□ -0.46
CDK5RAP3-231ENST00000584063 GBP2P32456 591 aaPredicted RBP12.19□□□□□ -0.46
CDK5RAP3-231ENST00000584063 COILP38432 576 aaPredicted RBP12.19□□□□□ -0.46
CDK5RAP3-231ENST00000584063 PSMC4P43686 418 aa12.19□□□□□ -0.46
CDK5RAP3-231ENST00000584063 FMO1Q01740 532 aa12.19□□□□□ -0.46
CDK5RAP3-231ENST00000584063 CNGA2Q16280 664 aa12.19□□□□□ -0.46
CDK5RAP3-231ENST00000584063 SEZ6Q53EL9 994 aa12.19□□□□□ -0.46
CDK5RAP3-231ENST00000584063 NOL9Q5SY16 702 aaKnown RBP12.19□□□□□ -0.46
CDK5RAP3-231ENST00000584063 TRPM8Q7Z2W7 1104 aa12.19□□□□□ -0.46
CDK5RAP3-231ENST00000584063 CCDC50Q8IVM0 306 aa12.19□□□□□ -0.46
CDK5RAP3-231ENST00000584063 SRRM1Q8IYB3 904 aaKnown RBP12.19□□□□□ -0.46
CDK5RAP3-231ENST00000584063 ACCSQ96QU6 501 aa12.19□□□□□ -0.46
CDK5RAP3-231ENST00000584063 APBA2Q99767 749 aa12.19□□□□□ -0.46
CDK5RAP3-231ENST00000584063 ACTR5Q9H9F9 607 aaPredicted RBP12.19□□□□□ -0.46
CDK5RAP3-231ENST00000584063 HPS4Q9NQG7 708 aa12.19□□□□□ -0.46
CDK5RAP3-231ENST00000584063 MTRF1LQ9UGC7 380 aaKnown RBP12.19□□□□□ -0.46
CDK5RAP3-231ENST00000584063 R3HDM2Q9Y2K5 976 aaKnown RBP12.19□□□□□ -0.46
CDK5RAP3-231ENST00000584063 TRIM17Q9Y577 477 aa12.19□□□□□ -0.46
CDK5RAP3-231ENST00000584063 DENND3A2RUS2 1198 aa12.19□□□□□ -0.46
CDK5RAP3-231ENST00000584063 BCRP11274 1271 aa12.19□□□□□ -0.46
CDK5RAP3-231ENST00000584063 CETPP11597 493 aa12.19□□□□□ -0.46
CDK5RAP3-231ENST00000584063 NPTX2P47972 431 aa12.19□□□□□ -0.46
CDK5RAP3-231ENST00000584063 PEX5P50542 639 aa12.19□□□□□ -0.46
CDK5RAP3-231ENST00000584063 CNGA3Q16281 694 aa12.19□□□□□ -0.46
CDK5RAP3-231ENST00000584063 SNRNP35Q16560 246 aaKnown RBP12.19□□□□□ -0.46
CDK5RAP3-231ENST00000584063 SGO2Q562F6 1265 aa12.19□□□□□ -0.46
CDK5RAP3-231ENST00000584063 LBX2Q6XYB7 198 aa12.19□□□□□ -0.46
CDK5RAP3-231ENST00000584063 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.19□□□□□ -0.46
CDK5RAP3-231ENST00000584063 PIH1D1Q9NWS0 290 aaKnown RBP12.19□□□□□ -0.46
CDK5RAP3-231ENST00000584063 CCDC163A0A0D9SF12 145 aa12.18□□□□□ -0.46
CDK5RAP3-231ENST00000584063 IQCA1LA6NCM1 817 aa12.18□□□□□ -0.46
CDK5RAP3-231ENST00000584063 WDR64B1ANS9 1081 aa12.18□□□□□ -0.46
CDK5RAP3-231ENST00000584063 STAM2O75886 525 aa12.18□□□□□ -0.46
CDK5RAP3-231ENST00000584063 SCNN1AP37088 669 aa12.18□□□□□ -0.46
CDK5RAP3-231ENST00000584063 PAPOLAP51003 745 aaKnown RBP12.18□□□□□ -0.46
CDK5RAP3-231ENST00000584063 CLNS1AP54105 237 aaKnown RBP12.18□□□□□ -0.46
CDK5RAP3-231ENST00000584063 EIF3BP55884 814 aaKnown RBP12.18□□□□□ -0.46
CDK5RAP3-231ENST00000584063 SP2Q02086 613 aa12.18□□□□□ -0.46
CDK5RAP3-231ENST00000584063 CALCOCO2Q13137 446 aa12.18□□□□□ -0.46
CDK5RAP3-231ENST00000584063 NFIL3Q16649 462 aa12.18□□□□□ -0.46
CDK5RAP3-231ENST00000584063 GRAMD1BQ3KR37 738 aa12.18□□□□□ -0.46
CDK5RAP3-231ENST00000584063 SH2D4BQ5SQS7 431 aa12.18□□□□□ -0.46
CDK5RAP3-231ENST00000584063 STXBP4Q6ZWJ1 553 aa12.18□□□□□ -0.46
CDK5RAP3-231ENST00000584063 INTS8Q75QN2 995 aaKnown RBP12.18□□□□□ -0.46
CDK5RAP3-231ENST00000584063 SLC13A5Q86YT5 568 aaPredicted RBP12.18□□□□□ -0.46
CDK5RAP3-231ENST00000584063 POMGNT1Q8WZA1 660 aa12.18□□□□□ -0.46
CDK5RAP3-231ENST00000584063 ACSF2Q96CM8 615 aaPredicted RBP12.18□□□□□ -0.46
CDK5RAP3-231ENST00000584063 MOV10L1Q9BXT6 1211 aaKnown RBP12.18□□□□□ -0.46
CDK5RAP3-231ENST00000584063 LUZP4Q9P127 313 aa12.18□□□□□ -0.46
CDK5RAP3-231ENST00000584063 MCM8Q9UJA3 840 aa12.18□□□□□ -0.46
CDK5RAP3-231ENST00000584063 TTC7AQ9ULT0 858 aaPredicted RBP12.18□□□□□ -0.46
CDK5RAP3-231ENST00000584063 ATXN2Q99700 1313 aaKnown RBP12.18□□□□□ -0.46
CDK5RAP3-231ENST00000584063 IGF2BP3O00425 579 aaKnown RBP eCLIP12.18□□□□□ -0.46
CDK5RAP3-231ENST00000584063 ZNF254O75437 659 aa12.18□□□□□ -0.46
CDK5RAP3-231ENST00000584063 ALOX15P16050 662 aaPredicted RBP12.18□□□□□ -0.46
CDK5RAP3-231ENST00000584063 NEDD9Q14511 834 aa12.18□□□□□ -0.46
CDK5RAP3-231ENST00000584063 STXBP2Q15833 593 aa12.18□□□□□ -0.46
CDK5RAP3-231ENST00000584063 TMEM95Q3KNT9 176 aa12.18□□□□□ -0.46
CDK5RAP3-231ENST00000584063 ZC3H12BQ5HYM0 836 aaKnown RBP12.18□□□□□ -0.46
CDK5RAP3-231ENST00000584063 HAUS1Q96CS2 278 aa12.18□□□□□ -0.46
CDK5RAP3-231ENST00000584063 CEP170P1Q96L14 293 aa12.18□□□□□ -0.46
CDK5RAP3-231ENST00000584063 FNBP1Q96RU3 617 aa12.18□□□□□ -0.46
CDK5RAP3-231ENST00000584063 NAP1L3Q99457 506 aaPredicted RBP12.18□□□□□ -0.46
CDK5RAP3-231ENST00000584063 ECT2Q9H8V3 914 aa12.18□□□□□ -0.46
CDK5RAP3-231ENST00000584063 CNOT10Q9H9A5 744 aaKnown RBP12.18□□□□□ -0.46
CDK5RAP3-231ENST00000584063 JPH1Q9HDC5 661 aaPredicted RBP12.18□□□□□ -0.46
CDK5RAP3-231ENST00000584063 AAASQ9NRG9 546 aa12.18□□□□□ -0.46
CDK5RAP3-231ENST00000584063 ANAPC7Q9UJX3 599 aa12.18□□□□□ -0.46
CDK5RAP3-231ENST00000584063 ADAMTS5Q9UNA0 930 aa12.18□□□□□ -0.46
CDK5RAP3-231ENST00000584063 PI4K2BG5E9Z4 385 aa12.18□□□□□ -0.46
CDK5RAP3-231ENST00000584063 PAEPP09466 180 aa12.18□□□□□ -0.46
CDK5RAP3-231ENST00000584063 EPB42P16452 691 aa12.18□□□□□ -0.46
CDK5RAP3-231ENST00000584063 CNGA1P29973 690 aa12.18□□□□□ -0.46
CDK5RAP3-231ENST00000584063 CHRNA3P32297 505 aa12.18□□□□□ -0.46
CDK5RAP3-231ENST00000584063 CRYMQ14894 314 aa12.18□□□□□ -0.46
CDK5RAP3-231ENST00000584063 ZBTB41Q5SVQ8 909 aa12.18□□□□□ -0.46
CDK5RAP3-231ENST00000584063 SLC9A9Q8IVB4 645 aa12.18□□□□□ -0.46
CDK5RAP3-231ENST00000584063 TMEM130Q8N3G9 435 aa12.18□□□□□ -0.46
CDK5RAP3-231ENST00000584063 TMEM161BQ8NDZ6 487 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms