RNA–Protein interactions for RNA: ENST00000583948.5

NUP85-224, Transcript of nucleoporin 85, humanhuman

TSL 2

Gene NUP85, Length 1,197 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-224ENST00000583948 CEP57L1Q8IYX8 460 aa12.41□□□□□ -0.42
NUP85-224ENST00000583948 TSTD1Q8NFU3 115 aa12.41□□□□□ -0.42
NUP85-224ENST00000583948 ERCC4Q92889 916 aaPredicted RBP12.41□□□□□ -0.42
NUP85-224ENST00000583948 USP13Q92995 863 aaPredicted RBP12.41□□□□□ -0.42
NUP85-224ENST00000583948 SUSD3Q96L08 255 aa12.41□□□□□ -0.42
NUP85-224ENST00000583948 AK8Q96MA6 479 aa12.41□□□□□ -0.42
NUP85-224ENST00000583948 UROC1Q96N76 676 aa12.41□□□□□ -0.42
NUP85-224ENST00000583948 ADPGKQ9BRR6 497 aa12.41□□□□□ -0.42
NUP85-224ENST00000583948 RAB34Q9BZG1 259 aa12.41□□□□□ -0.42
NUP85-224ENST00000583948 GPR88Q9GZN0 384 aa12.41□□□□□ -0.42
NUP85-224ENST00000583948 HOOK1Q9UJC3 728 aaKnown RBP12.41□□□□□ -0.42
NUP85-224ENST00000583948 ZNF462Q96JM2 2506 aa12.41□□□□□ -0.42
NUP85-224ENST00000583948 CEP192Q8TEP8 1941 aa12.41□□□□□ -0.42
NUP85-224ENST00000583948 PPEF2O14830 753 aa12.4□□□□□ -0.42
NUP85-224ENST00000583948 SYN3O14994 580 aa12.4□□□□□ -0.42
NUP85-224ENST00000583948 CD59P13987 128 aa12.4□□□□□ -0.42
NUP85-224ENST00000583948 GJA4P35212 333 aa12.4□□□□□ -0.42
NUP85-224ENST00000583948 STAT6P42226 847 aa12.4□□□□□ -0.42
NUP85-224ENST00000583948 FXR2P51116 673 aaKnown RBP eCLIP12.4□□□□□ -0.42
NUP85-224ENST00000583948 EPHB3P54753 998 aa12.4□□□□□ -0.42
NUP85-224ENST00000583948 TYRO3Q06418 890 aa12.4□□□□□ -0.42
NUP85-224ENST00000583948 KARSQ15046 597 aaKnown RBP12.4□□□□□ -0.42
NUP85-224ENST00000583948 MAPK6Q16659 721 aa12.4□□□□□ -0.42
NUP85-224ENST00000583948 ATF7IP2Q5U623 682 aa12.4□□□□□ -0.42
NUP85-224ENST00000583948 CENPPQ6IPU0 288 aa12.4□□□□□ -0.42
NUP85-224ENST00000583948 RBM43Q6ZSC3 357 aaKnown RBP12.4□□□□□ -0.42
NUP85-224ENST00000583948 TMEM150AQ86TG1 271 aa12.4□□□□□ -0.42
NUP85-224ENST00000583948 SLCO6A1Q86UG4 719 aa12.4□□□□□ -0.42
NUP85-224ENST00000583948 SLFN12Q8IYM2 578 aa12.4□□□□□ -0.42
NUP85-224ENST00000583948 MAB21L3Q8N8X9 362 aa12.4□□□□□ -0.42
NUP85-224ENST00000583948 GLIS3Q8NEA6 775 aa12.4□□□□□ -0.42
NUP85-224ENST00000583948 BEST2Q8NFU1 509 aa12.4□□□□□ -0.42
NUP85-224ENST00000583948 CCDC34Q96HJ3 373 aa12.4□□□□□ -0.42
NUP85-224ENST00000583948 ZBTB45Q96K62 511 aaPredicted RBP12.4□□□□□ -0.42
NUP85-224ENST00000583948 PRIMPOLQ96LW4 560 aa12.4□□□□□ -0.42
NUP85-224ENST00000583948 CCDC43Q96MW1 224 aaKnown RBP12.4□□□□□ -0.42
NUP85-224ENST00000583948 PLIN2Q99541 437 aa12.4□□□□□ -0.42
NUP85-224ENST00000583948 P2RY13Q9BPV8 354 aa12.4□□□□□ -0.42
NUP85-224ENST00000583948 PYM1Q9BRP8 204 aaKnown RBP12.4□□□□□ -0.42
NUP85-224ENST00000583948 CDT1Q9H211 546 aa12.4□□□□□ -0.42
NUP85-224ENST00000583948 TTC12Q9H892 705 aaPredicted RBP12.4□□□□□ -0.42
NUP85-224ENST00000583948 ANKEF1Q9NU02 776 aa12.4□□□□□ -0.42
NUP85-224ENST00000583948 LRWD1Q9UFC0 647 aa12.4□□□□□ -0.42
NUP85-224ENST00000583948 CCDC39Q9UFE4 941 aa12.4□□□□□ -0.42
NUP85-224ENST00000583948 EBF1Q9UH73 591 aa12.4□□□□□ -0.42
NUP85-224ENST00000583948 DENND4CQ5VZ89 1909 aa12.4□□□□□ -0.42
NUP85-224ENST00000583948 CITO14578 2027 aa12.39□□□□□ -0.43
NUP85-224ENST00000583948 MTMR11A4FU01 709 aa12.39□□□□□ -0.43
NUP85-224ENST00000583948 ACTN4O43707 911 aaKnown RBP12.39□□□□□ -0.43
NUP85-224ENST00000583948 PLA2G2AP14555 144 aa12.39□□□□□ -0.43
NUP85-224ENST00000583948 ATF6P18850 670 aa12.39□□□□□ -0.43
NUP85-224ENST00000583948 PNOCQ13519 176 aa12.39□□□□□ -0.43
NUP85-224ENST00000583948 USP39Q53GS9 565 aaKnown RBP12.39□□□□□ -0.43
NUP85-224ENST00000583948 L1TD1Q5T7N2 865 aaKnown RBP12.39□□□□□ -0.43
NUP85-224ENST00000583948 TXNDC8Q6A555 127 aa12.39□□□□□ -0.43
NUP85-224ENST00000583948 GRAMD1CQ8IYS0 662 aa12.39□□□□□ -0.43
NUP85-224ENST00000583948 IQUBQ8NA54 791 aa12.39□□□□□ -0.43
NUP85-224ENST00000583948 LEMD2Q8NC56 503 aa12.39□□□□□ -0.43
NUP85-224ENST00000583948 CALML4Q96GE6 196 aa12.39□□□□□ -0.43
NUP85-224ENST00000583948 CDK5RAP3Q96JB5 506 aa12.39□□□□□ -0.43
NUP85-224ENST00000583948 NUSAP1Q9BXS6 441 aaKnown RBP12.39□□□□□ -0.43
NUP85-224ENST00000583948 TASP1Q9H6P5 420 aa12.39□□□□□ -0.43
NUP85-224ENST00000583948 USP25Q9UHP3 1055 aa12.39□□□□□ -0.43
NUP85-224ENST00000583948 PCDHA12Q9UN75 941 aa12.39□□□□□ -0.43
NUP85-224ENST00000583948 WNT6Q9Y6F9 365 aa12.39□□□□□ -0.43
NUP85-224ENST00000583948 OBSL1O75147 1896 aa12.39□□□□□ -0.43
NUP85-224ENST00000583948 PCDH15Q96QU1 1955 aa12.39□□□□□ -0.43
NUP85-224ENST00000583948 MED24O75448 989 aa12.38□□□□□ -0.43
NUP85-224ENST00000583948 PRR29P0C7W0 189 aa12.38□□□□□ -0.43
NUP85-224ENST00000583948 FTH1P19P0C7X4 201 aa12.38□□□□□ -0.43
NUP85-224ENST00000583948 SPATA31C1P0DKV0 1188 aa12.38□□□□□ -0.43
NUP85-224ENST00000583948 AFMP43652 599 aa12.38□□□□□ -0.43
NUP85-224ENST00000583948 ALDH1A3P47895 512 aa12.38□□□□□ -0.43
NUP85-224ENST00000583948 GPR15P49685 360 aa12.38□□□□□ -0.43
NUP85-224ENST00000583948 POSTNQ15063 836 aa12.38□□□□□ -0.43
NUP85-224ENST00000583948 STX1AQ16623 288 aa12.38□□□□□ -0.43
NUP85-224ENST00000583948 XKR4Q5GH76 650 aa12.38□□□□□ -0.43
NUP85-224ENST00000583948 EMC10Q5UCC4 262 aa12.38□□□□□ -0.43
NUP85-224ENST00000583948 SDHAF4Q5VUM1 108 aa12.38□□□□□ -0.43
NUP85-224ENST00000583948 RRAGBQ5VZM2 374 aa12.38□□□□□ -0.43
NUP85-224ENST00000583948 CCNI2Q6ZMN8 369 aaPredicted RBP12.38□□□□□ -0.43
NUP85-224ENST00000583948 CMTM8Q8IZV2 173 aa12.38□□□□□ -0.43
NUP85-224ENST00000583948 IGSF22Q8N9C0 903 aa12.38□□□□□ -0.43
NUP85-224ENST00000583948 RNF214Q8ND24 703 aa12.38□□□□□ -0.43
NUP85-224ENST00000583948 DEPTORQ8TB45 409 aa12.38□□□□□ -0.43
NUP85-224ENST00000583948 SNX29Q8TEQ0 813 aa12.38□□□□□ -0.43
NUP85-224ENST00000583948 PSMG2Q969U7 264 aa12.38□□□□□ -0.43
NUP85-224ENST00000583948 SLC22A12Q96S37 553 aa12.38□□□□□ -0.43
NUP85-224ENST00000583948 CYP2S1Q96SQ9 504 aa12.38□□□□□ -0.43
NUP85-224ENST00000583948 SEPT5Q99719 369 aaPredicted RBP12.38□□□□□ -0.43
NUP85-224ENST00000583948 FUCA2Q9BTY2 467 aa12.38□□□□□ -0.43
NUP85-224ENST00000583948 CCSER1Q9C0I3 900 aa12.38□□□□□ -0.43
NUP85-224ENST00000583948 RBSNQ9H1K0 784 aa12.38□□□□□ -0.43
NUP85-224ENST00000583948 LINC00597Q9H2U6 94 aa12.38□□□□□ -0.43
NUP85-224ENST00000583948 GRPEL1Q9HAV7 217 aa12.38□□□□□ -0.43
NUP85-224ENST00000583948 THG1LQ9NWX6 298 aaKnown RBP12.38□□□□□ -0.43
NUP85-224ENST00000583948 EVLQ9UI08 416 aaPredicted RBP12.38□□□□□ -0.43
NUP85-224ENST00000583948 TBX20Q9UMR3 447 aa12.38□□□□□ -0.43
NUP85-224ENST00000583948 PCDHB8Q9UN66 801 aa12.38□□□□□ -0.43
NUP85-224ENST00000583948 FAM149AA5PLN7 773 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms