RNA–Protein interactions for RNA: ENST00000583902.1

CASC3-209, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-209ENST00000583902 RAB30Q15771 203 aa9.76□□□□□ -0.85
CASC3-209ENST00000583902 CFAP221Q4G0U5 840 aa9.76□□□□□ -0.85
CASC3-209ENST00000583902 KIAA1841Q6NSI8 718 aa9.76□□□□□ -0.85
CASC3-209ENST00000583902 VSTM1Q6UX27 236 aa9.76□□□□□ -0.85
CASC3-209ENST00000583902 ARCQ7LC44 396 aa9.76□□□□□ -0.85
CASC3-209ENST00000583902 COLGALT1Q8NBJ5 622 aa9.76□□□□□ -0.85
CASC3-209ENST00000583902 C1orf131Q8NDD1 294 aaKnown RBP9.76□□□□□ -0.85
CASC3-209ENST00000583902 IPO4Q8TEX9 1081 aaKnown RBP9.76□□□□□ -0.85
CASC3-209ENST00000583902 PIK3R5Q8WYR1 880 aa9.76□□□□□ -0.85
CASC3-209ENST00000583902 SMARCD1Q96GM5 515 aa9.76□□□□□ -0.85
CASC3-209ENST00000583902 FAM84AQ96KN4 292 aa9.76□□□□□ -0.85
CASC3-209ENST00000583902 ZNF830Q96NB3 372 aaPredicted RBP9.76□□□□□ -0.85
CASC3-209ENST00000583902 ALS2CR12Q96Q35 445 aa9.76□□□□□ -0.85
CASC3-209ENST00000583902 TRIM62Q9BVG3 475 aa9.76□□□□□ -0.85
CASC3-209ENST00000583902 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.76□□□□□ -0.85
CASC3-209ENST00000583902 CHST7Q9NS84 486 aa9.76□□□□□ -0.85
CASC3-209ENST00000583902 SPTLC3Q9NUV7 552 aa9.76□□□□□ -0.85
CASC3-209ENST00000583902 SEPT11Q9NVA2 429 aaKnown RBP9.76□□□□□ -0.85
CASC3-209ENST00000583902 COMMD8Q9NX08 183 aa9.76□□□□□ -0.85
CASC3-209ENST00000583902 MARCH5Q9NX47 278 aa9.76□□□□□ -0.85
CASC3-209ENST00000583902 EHD2Q9NZN4 543 aa9.76□□□□□ -0.85
CASC3-209ENST00000583902 DNAJB4Q9UDY4 337 aa9.76□□□□□ -0.85
CASC3-209ENST00000583902 GTF3C4Q9UKN8 822 aa9.76□□□□□ -0.85
CASC3-209ENST00000583902 PRG3Q9Y2Y8 225 aaPredicted RBP9.76□□□□□ -0.85
CASC3-209ENST00000583902 PCDHA11Q9Y5I1 949 aa9.76□□□□□ -0.85
CASC3-209ENST00000583902 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.75□□□□□ -0.85
CASC3-209ENST00000583902 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.75□□□□□ -0.85
CASC3-209ENST00000583902 XPO1O14980 1071 aaKnown RBP9.75□□□□□ -0.85
CASC3-209ENST00000583902 TRIM66O15016 1216 aa9.75□□□□□ -0.85
CASC3-209ENST00000583902 KIF5CO60282 957 aa9.75□□□□□ -0.85
CASC3-209ENST00000583902 MTA2O94776 668 aa9.75□□□□□ -0.85
CASC3-209ENST00000583902 FBXO21O94952 628 aa9.75□□□□□ -0.85
CASC3-209ENST00000583902 MMEP08473 750 aa9.75□□□□□ -0.85
CASC3-209ENST00000583902 FAM200BP0CF97 657 aa9.75□□□□□ -0.85
CASC3-209ENST00000583902 IBSPP21815 317 aaPredicted RBP9.75□□□□□ -0.85
CASC3-209ENST00000583902 MMP8P22894 467 aa9.75□□□□□ -0.85
CASC3-209ENST00000583902 ARHGAP25P42331 645 aa9.75□□□□□ -0.85
CASC3-209ENST00000583902 GPD2P43304 727 aa9.75□□□□□ -0.85
CASC3-209ENST00000583902 BRCC3P46736 316 aa9.75□□□□□ -0.85
CASC3-209ENST00000583902 PLA2G4AP47712 749 aa9.75□□□□□ -0.85
CASC3-209ENST00000583902 RAP1GAPP47736 663 aa9.75□□□□□ -0.85
CASC3-209ENST00000583902 GABRB2P47870 512 aa9.75□□□□□ -0.85
CASC3-209ENST00000583902 RGS19P49795 217 aa9.75□□□□□ -0.85
CASC3-209ENST00000583902 NOMO3P69849 1222 aa9.75□□□□□ -0.85
CASC3-209ENST00000583902 DSG1Q02413 1049 aa9.75□□□□□ -0.85
CASC3-209ENST00000583902 ZNF268Q14587 947 aaPredicted RBP9.75□□□□□ -0.85
CASC3-209ENST00000583902 CTXN3Q4LDR2 81 aa9.75□□□□□ -0.85
CASC3-209ENST00000583902 PKDCCQ504Y2 493 aa9.75□□□□□ -0.85
CASC3-209ENST00000583902 ZNF394Q53GI3 561 aa9.75□□□□□ -0.85
CASC3-209ENST00000583902 VARS2Q5ST30 1063 aaKnown RBP9.75□□□□□ -0.85
CASC3-209ENST00000583902 FAM171A1Q5VUB5 890 aa9.75□□□□□ -0.85
CASC3-209ENST00000583902 TPGS2Q68CL5 300 aa9.75□□□□□ -0.85
CASC3-209ENST00000583902 SLC8B1Q6J4K2 584 aa9.75□□□□□ -0.85
CASC3-209ENST00000583902 TOGARAM2Q6ZUX3 1019 aa9.75□□□□□ -0.85
CASC3-209ENST00000583902 ACOT1Q86TX2 421 aa9.75□□□□□ -0.85
CASC3-209ENST00000583902 ERICH1Q86X53 443 aa9.75□□□□□ -0.85
CASC3-209ENST00000583902 SYCE1Q8N0S2 351 aa9.75□□□□□ -0.85
CASC3-209ENST00000583902 SCML4Q8N228 414 aa9.75□□□□□ -0.85
CASC3-209ENST00000583902 TRIM58Q8NG06 486 aa9.75□□□□□ -0.85
CASC3-209ENST00000583902 LNX1Q8TBB1 728 aaPredicted RBP9.75□□□□□ -0.85
CASC3-209ENST00000583902 SPPL2BQ8TCT7 592 aa9.75□□□□□ -0.85
CASC3-209ENST00000583902 KCTD13Q8WZ19 329 aa9.75□□□□□ -0.85
CASC3-209ENST00000583902 RFFLQ8WZ73 363 aa9.75□□□□□ -0.85
CASC3-209ENST00000583902 RNPC3Q96LT9 517 aaKnown RBP9.75□□□□□ -0.85
CASC3-209ENST00000583902 PAAF1Q9BRP4 392 aa9.75□□□□□ -0.85
CASC3-209ENST00000583902 C11orf84Q9BUA3 381 aaPredicted RBP9.75□□□□□ -0.85
CASC3-209ENST00000583902 DUSP16Q9BY84 665 aa9.75□□□□□ -0.85
CASC3-209ENST00000583902 ZCWPW1Q9H0M4 648 aa9.75□□□□□ -0.85
CASC3-209ENST00000583902 PARVAQ9NVD7 372 aa9.75□□□□□ -0.85
CASC3-209ENST00000583902 ADAM22Q9P0K1 906 aa9.75□□□□□ -0.85
CASC3-209ENST00000583902 FNIP2Q9P278 1114 aa9.75□□□□□ -0.85
CASC3-209ENST00000583902 TSPAN16Q9UKR8 245 aa9.75□□□□□ -0.85
CASC3-209ENST00000583902 ZMYND8Q9ULU4 1186 aaPredicted RBP9.75□□□□□ -0.85
CASC3-209ENST00000583902 IRAK3Q9Y616 596 aa9.75□□□□□ -0.85
CASC3-209ENST00000583902 MRPL42Q9Y6G3 142 aaKnown RBP9.75□□□□□ -0.85
CASC3-209ENST00000583902 VWA8A3KMH1 1905 aa9.75□□□□□ -0.85
CASC3-209ENST00000583902 PTPRDP23468 1912 aa9.75□□□□□ -0.85
CASC3-209ENST00000583902 NCANO14594 1321 aa9.75□□□□□ -0.85
CASC3-209ENST00000583902 CEP290O15078 2479 aa9.75□□□□□ -0.85
CASC3-209ENST00000583902 NLRC5Q86WI3 1866 aa9.74□□□□□ -0.85
CASC3-209ENST00000583902 A0A1W2PPC1 479 aa9.74□□□□□ -0.85
CASC3-209ENST00000583902 M0QYV0 167 aa9.74□□□□□ -0.85
CASC3-209ENST00000583902 TBC1D4O60343 1298 aa9.74□□□□□ -0.85
CASC3-209ENST00000583902 MICAL2O94851 1124 aa9.74□□□□□ -0.85
CASC3-209ENST00000583902 URODP06132 367 aa9.74□□□□□ -0.85
CASC3-209ENST00000583902 GLI1P08151 1106 aa9.74□□□□□ -0.85
CASC3-209ENST00000583902 PDGFRBP09619 1106 aa9.74□□□□□ -0.85
CASC3-209ENST00000583902 PNMA6AP0CW24 399 aaPredicted RBP9.74□□□□□ -0.85
CASC3-209ENST00000583902 NPR3P17342 541 aa9.74□□□□□ -0.85
CASC3-209ENST00000583902 SYN1P17600 705 aa9.74□□□□□ -0.85
CASC3-209ENST00000583902 BRD2P25440 801 aaKnown RBP9.74□□□□□ -0.85
CASC3-209ENST00000583902 LMO2P25791 158 aa9.74□□□□□ -0.85
CASC3-209ENST00000583902 BMPR1AP36894 532 aa9.74□□□□□ -0.85
CASC3-209ENST00000583902 MAGEA10P43363 369 aaPredicted RBP9.74□□□□□ -0.85
CASC3-209ENST00000583902 TUFMP49411 452 aaKnown RBP9.74□□□□□ -0.85
CASC3-209ENST00000583902 GLUD2P49448 558 aa9.74□□□□□ -0.85
CASC3-209ENST00000583902 GALCP54803 685 aa9.74□□□□□ -0.85
CASC3-209ENST00000583902 CYP27A1Q02318 531 aa9.74□□□□□ -0.85
CASC3-209ENST00000583902 GPR17Q13304 367 aa9.74□□□□□ -0.85
CASC3-209ENST00000583902 TUBB2AQ13885 445 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms