RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 BACE2Q9Y5Z0 518 aa17.37■□□□□ 0.37
CDK5RAP3-228ENST00000583363 KIAA1671Q9BY89 1806 aa17.37■□□□□ 0.37
CDK5RAP3-228ENST00000583363 SOWAHDA6NJG2 315 aa17.36■□□□□ 0.37
CDK5RAP3-228ENST00000583363 DDX3XO00571 662 aaKnown RBP eCLIP17.36■□□□□ 0.371e-8■■■□□ 15.4
CDK5RAP3-228ENST00000583363 MED7O43513 233 aa17.36■□□□□ 0.37
CDK5RAP3-228ENST00000583363 LPXNO60711 386 aa17.36■□□□□ 0.37
CDK5RAP3-228ENST00000583363 LILRB3O75022 631 aa17.36■□□□□ 0.37
CDK5RAP3-228ENST00000583363 PLA2G5P39877 138 aa17.36■□□□□ 0.37
CDK5RAP3-228ENST00000583363 STILQ15468 1287 aa17.36■□□□□ 0.37
CDK5RAP3-228ENST00000583363 PPP1R26Q5T8A7 1209 aaPredicted RBP17.36■□□□□ 0.37
CDK5RAP3-228ENST00000583363 ZNF280DQ6N043 979 aa17.36■□□□□ 0.37
CDK5RAP3-228ENST00000583363 KIAA1841Q6NSI8 718 aa17.36■□□□□ 0.37
CDK5RAP3-228ENST00000583363 RAD9BQ6WBX8 426 aa17.36■□□□□ 0.37
CDK5RAP3-228ENST00000583363 MYCBPAPQ8TBZ2 947 aa17.36■□□□□ 0.37
CDK5RAP3-228ENST00000583363 RIN2Q8WYP3 895 aaPredicted RBP17.36■□□□□ 0.37
CDK5RAP3-228ENST00000583363 CYFIP2Q96F07 1278 aa17.36■□□□□ 0.37
CDK5RAP3-228ENST00000583363 PCDHB18PQ96TA0 734 aa17.36■□□□□ 0.37
CDK5RAP3-228ENST00000583363 ADAMTS1Q9UHI8 967 aa17.36■□□□□ 0.37
CDK5RAP3-228ENST00000583363 GTF3C4Q9UKN8 822 aa17.36■□□□□ 0.37
CDK5RAP3-228ENST00000583363 PCDHGC3Q9UN70 934 aa17.36■□□□□ 0.37
CDK5RAP3-228ENST00000583363 COG5Q9UP83 839 aa17.36■□□□□ 0.37
CDK5RAP3-228ENST00000583363 EPN1Q9Y6I3 576 aaPredicted RBP17.36■□□□□ 0.37
CDK5RAP3-228ENST00000583363 O00370 1275 aa17.35■□□□□ 0.37
CDK5RAP3-228ENST00000583363 ARHGAP6O43182 974 aa17.35■□□□□ 0.37
CDK5RAP3-228ENST00000583363 NRDCO43847 1150 aa17.35■□□□□ 0.37
CDK5RAP3-228ENST00000583363 CFHP08603 1231 aa17.35■□□□□ 0.37
CDK5RAP3-228ENST00000583363 CTSAP10619 480 aa17.35■□□□□ 0.37
CDK5RAP3-228ENST00000583363 GLUD2P49448 558 aa17.35■□□□□ 0.37
CDK5RAP3-228ENST00000583363 TSPY1Q01534 308 aa17.35■□□□□ 0.37
CDK5RAP3-228ENST00000583363 UBE3AQ05086 875 aa17.35■□□□□ 0.37
CDK5RAP3-228ENST00000583363 BMS1Q14692 1282 aaKnown RBP17.35■□□□□ 0.37
CDK5RAP3-228ENST00000583363 HS1BP3Q53T59 392 aa17.35■□□□□ 0.37
CDK5RAP3-228ENST00000583363 MDH1BQ5I0G3 518 aa17.35■□□□□ 0.37
CDK5RAP3-228ENST00000583363 PRSS55Q6UWB4 352 aaPredicted RBP17.35■□□□□ 0.37
CDK5RAP3-228ENST00000583363 LCLAT1Q6UWP7 414 aa17.35■□□□□ 0.37
CDK5RAP3-228ENST00000583363 RSPO2Q6UXX9 243 aaPredicted RBP17.35■□□□□ 0.37
CDK5RAP3-228ENST00000583363 PAQR9Q6ZVX9 377 aa17.35■□□□□ 0.37
CDK5RAP3-228ENST00000583363 VPS36Q86VN1 386 aa17.35■□□□□ 0.37
CDK5RAP3-228ENST00000583363 DCP1BQ8IZD4 617 aaKnown RBP17.35■□□□□ 0.37
CDK5RAP3-228ENST00000583363 HNRNPABQ99729 332 aaKnown RBP17.35■□□□□ 0.37
CDK5RAP3-228ENST00000583363 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.35■□□□□ 0.371e-6■□□□□ 8
CDK5RAP3-228ENST00000583363 C1QTNF1Q9BXJ1 281 aa17.35■□□□□ 0.37
CDK5RAP3-228ENST00000583363 B3GNT5Q9BYG0 378 aa17.35■□□□□ 0.37
CDK5RAP3-228ENST00000583363 ZBP1Q9H171 429 aa17.35■□□□□ 0.37
CDK5RAP3-228ENST00000583363 DEF6Q9H4E7 631 aa17.35■□□□□ 0.37
CDK5RAP3-228ENST00000583363 ALG13Q9NP73 1137 aaKnown RBP17.35■□□□□ 0.37
CDK5RAP3-228ENST00000583363 TMLHEQ9NVH6 421 aa17.35■□□□□ 0.37
CDK5RAP3-228ENST00000583363 MTRRQ9UBK8 725 aa17.35■□□□□ 0.37
CDK5RAP3-228ENST00000583363 A0A087X0T9 212 aa17.34■□□□□ 0.37
CDK5RAP3-228ENST00000583363 AKR1B10O60218 316 aa17.34■□□□□ 0.37
CDK5RAP3-228ENST00000583363 MICAL2O94851 1124 aa17.34■□□□□ 0.37
CDK5RAP3-228ENST00000583363 CYP1A1P04798 512 aaPredicted RBP17.34■□□□□ 0.37
CDK5RAP3-228ENST00000583363 FAM228BP0C875 321 aa17.34■□□□□ 0.37
CDK5RAP3-228ENST00000583363 SSTR3P32745 418 aaPredicted RBP17.34■□□□□ 0.37
CDK5RAP3-228ENST00000583363 KIF11P52732 1056 aa17.34■□□□□ 0.37
CDK5RAP3-228ENST00000583363 MTF1Q14872 753 aa17.34■□□□□ 0.37
CDK5RAP3-228ENST00000583363 MAPRE1Q15691 268 aaKnown RBP17.34■□□□□ 0.37
CDK5RAP3-228ENST00000583363 PSMD5Q16401 504 aa17.34■□□□□ 0.37
CDK5RAP3-228ENST00000583363 GLYCTKQ8IVS8 523 aa17.34■□□□□ 0.37
CDK5RAP3-228ENST00000583363 FBXO22Q8NEZ5 403 aa17.34■□□□□ 0.37
CDK5RAP3-228ENST00000583363 CLSTN3Q9BQT9 956 aa17.34■□□□□ 0.37
CDK5RAP3-228ENST00000583363 C11orf84Q9BUA3 381 aaPredicted RBP17.34■□□□□ 0.37
CDK5RAP3-228ENST00000583363 LHX5Q9H2C1 402 aa17.34■□□□□ 0.37
CDK5RAP3-228ENST00000583363 PDCL3Q9H2J4 239 aa17.34■□□□□ 0.37
CDK5RAP3-228ENST00000583363 EPHX3Q9H6B9 360 aa17.34■□□□□ 0.37
CDK5RAP3-228ENST00000583363 MRPL17Q9NRX2 175 aaKnown RBP17.34■□□□□ 0.37
CDK5RAP3-228ENST00000583363 FAM49BQ9NUQ9 324 aa17.34■□□□□ 0.37
CDK5RAP3-228ENST00000583363 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.34■□□□□ 0.37
CDK5RAP3-228ENST00000583363 SSX2IPQ9Y2D8 614 aa17.34■□□□□ 0.37
CDK5RAP3-228ENST00000583363 BRWD1Q9NSI6 2320 aa17.33■□□□□ 0.37
CDK5RAP3-228ENST00000583363 TSC2P49815 1807 aa17.33■□□□□ 0.37
CDK5RAP3-228ENST00000583363 EIF3CLB5ME19 914 aaKnown RBP17.33■□□□□ 0.36
CDK5RAP3-228ENST00000583363 H3BNC9 293 aa17.33■□□□□ 0.36
CDK5RAP3-228ENST00000583363 C2CD2LO14523 706 aa17.33■□□□□ 0.36
CDK5RAP3-228ENST00000583363 LCA5LO95447 670 aa17.33■□□□□ 0.36
CDK5RAP3-228ENST00000583363 CXCL14O95715 111 aa17.33■□□□□ 0.36
CDK5RAP3-228ENST00000583363 URODP06132 367 aa17.33■□□□□ 0.36
CDK5RAP3-228ENST00000583363 OR4Q2P0C623 313 aa17.33■□□□□ 0.36
CDK5RAP3-228ENST00000583363 CCDC130P13994 396 aa17.33■□□□□ 0.36
CDK5RAP3-228ENST00000583363 DNAJB1P25685 340 aa17.33■□□□□ 0.36
CDK5RAP3-228ENST00000583363 CYLC1P35663 651 aaPredicted RBP17.33■□□□□ 0.36
CDK5RAP3-228ENST00000583363 ERVFC1P60507 584 aa17.33■□□□□ 0.36
CDK5RAP3-228ENST00000583363 GFPT1Q06210 699 aaPredicted RBP17.33■□□□□ 0.36
CDK5RAP3-228ENST00000583363 GPR17Q13304 367 aa17.33■□□□□ 0.36
CDK5RAP3-228ENST00000583363 SLC18A3Q16572 532 aa17.33■□□□□ 0.36
CDK5RAP3-228ENST00000583363 CCDC142Q17RM4 750 aa17.33■□□□□ 0.36
CDK5RAP3-228ENST00000583363 PKDCCQ504Y2 493 aa17.33■□□□□ 0.36
CDK5RAP3-228ENST00000583363 SLC8B1Q6J4K2 584 aa17.33■□□□□ 0.36
CDK5RAP3-228ENST00000583363 DENND1BQ6P3S1 775 aa17.33■□□□□ 0.36
CDK5RAP3-228ENST00000583363 TRIM72Q6ZMU5 477 aa17.33■□□□□ 0.36
CDK5RAP3-228ENST00000583363 FUKQ8N0W3 1084 aa17.33■□□□□ 0.36
CDK5RAP3-228ENST00000583363 WDTC1Q8N5D0 677 aa17.33■□□□□ 0.36
CDK5RAP3-228ENST00000583363 ANKRD52Q8NB46 1076 aa17.33■□□□□ 0.36
CDK5RAP3-228ENST00000583363 SLC2A14Q8TDB8 520 aa17.33■□□□□ 0.36
CDK5RAP3-228ENST00000583363 POF1BQ8WVV4 589 aa17.33■□□□□ 0.36
CDK5RAP3-228ENST00000583363 HLA-CQ95604 372 aa17.33■□□□□ 0.36
CDK5RAP3-228ENST00000583363 FAM122AQ96E09 287 aa17.33■□□□□ 0.36
CDK5RAP3-228ENST00000583363 PCED1BQ96HM7 432 aa17.33■□□□□ 0.36
CDK5RAP3-228ENST00000583363 EIF3CQ99613 913 aaKnown RBP17.33■□□□□ 0.36
CDK5RAP3-228ENST00000583363 RXFP1Q9HBX9 757 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms