RNA–Protein interactions for RNA: ENST00000582308.1

RFFL-210, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-210ENST00000582308 WDR27A2RRH5 827 aa10.12□□□□□ -0.79
RFFL-210ENST00000582308 TEX28O15482 410 aa10.12□□□□□ -0.79
RFFL-210ENST00000582308 MICAL2O94851 1124 aa10.12□□□□□ -0.79
RFFL-210ENST00000582308 MMEP08473 750 aa10.12□□□□□ -0.79
RFFL-210ENST00000582308 EIF4A3P38919 411 aaKnown RBP10.12□□□□□ -0.79
RFFL-210ENST00000582308 PDE6CP51160 858 aa10.12□□□□□ -0.79
RFFL-210ENST00000582308 FMO1Q01740 532 aa10.12□□□□□ -0.79
RFFL-210ENST00000582308 CDR2Q01850 454 aa10.12□□□□□ -0.79
RFFL-210ENST00000582308 ROR1Q01973 937 aa10.12□□□□□ -0.79
RFFL-210ENST00000582308 GPR17Q13304 367 aa10.12□□□□□ -0.79
RFFL-210ENST00000582308 RAB33AQ14088 237 aa10.12□□□□□ -0.79
RFFL-210ENST00000582308 SLC39A12Q504Y0 691 aa10.12□□□□□ -0.79
RFFL-210ENST00000582308 PDE12Q6L8Q7 609 aaKnown RBP10.12□□□□□ -0.79
RFFL-210ENST00000582308 DENND1BQ6P3S1 775 aa10.12□□□□□ -0.79
RFFL-210ENST00000582308 LCLAT1Q6UWP7 414 aa10.12□□□□□ -0.79
RFFL-210ENST00000582308 RNF19BQ6ZMZ0 732 aa10.12□□□□□ -0.79
RFFL-210ENST00000582308 TMEM139Q8IV31 216 aa10.12□□□□□ -0.79
RFFL-210ENST00000582308 GLYCTKQ8IVS8 523 aa10.12□□□□□ -0.79
RFFL-210ENST00000582308 LRRC8AQ8IWT6 810 aa10.12□□□□□ -0.79
RFFL-210ENST00000582308 DCP1BQ8IZD4 617 aaKnown RBP10.12□□□□□ -0.79
RFFL-210ENST00000582308 ATAD1Q8NBU5 361 aa10.12□□□□□ -0.79
RFFL-210ENST00000582308 SLC2A14Q8TDB8 520 aa10.12□□□□□ -0.79
RFFL-210ENST00000582308 MYLPFQ96A32 169 aa10.12□□□□□ -0.79
RFFL-210ENST00000582308 KLHL5Q96PQ7 755 aa10.12□□□□□ -0.79
RFFL-210ENST00000582308 PCDHB18PQ96TA0 734 aa10.12□□□□□ -0.79
RFFL-210ENST00000582308 AGPAT1Q99943 283 aa10.12□□□□□ -0.79
RFFL-210ENST00000582308 RHOBTB2Q9BYZ6 727 aa10.12□□□□□ -0.79
RFFL-210ENST00000582308 DNAI2Q9GZS0 605 aa10.12□□□□□ -0.79
RFFL-210ENST00000582308 LMAN2LQ9H0V9 348 aa10.12□□□□□ -0.79
RFFL-210ENST00000582308 TTYH1Q9H313 450 aaPredicted RBP10.12□□□□□ -0.79
RFFL-210ENST00000582308 NGRNQ9NPE2 291 aaKnown RBP10.12□□□□□ -0.79
RFFL-210ENST00000582308 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.12□□□□□ -0.79
RFFL-210ENST00000582308 ZNHIT6Q9NWK9 470 aaKnown RBP10.12□□□□□ -0.79
RFFL-210ENST00000582308 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.12□□□□□ -0.79
RFFL-210ENST00000582308 BZW2Q9Y6E2 419 aaKnown RBP10.12□□□□□ -0.79
RFFL-210ENST00000582308 CDH23Q9H251 3354 aa10.12□□□□□ -0.79
RFFL-210ENST00000582308 MTMR11A4FU01 709 aa10.11□□□□□ -0.79
RFFL-210ENST00000582308 DDX3XO00571 662 aaKnown RBP eCLIP10.11□□□□□ -0.791e-14■■■□□ 16.5
RFFL-210ENST00000582308 MED7O43513 233 aa10.11□□□□□ -0.79
RFFL-210ENST00000582308 ABLIM3O94929 683 aa10.11□□□□□ -0.79
RFFL-210ENST00000582308 PTMAP06454 111 aaKnown RBP10.11□□□□□ -0.79
RFFL-210ENST00000582308 CPB1P15086 417 aa10.11□□□□□ -0.79
RFFL-210ENST00000582308 TNFAIP3P21580 790 aa10.11□□□□□ -0.79
RFFL-210ENST00000582308 BDNFP23560 247 aa10.11□□□□□ -0.79
RFFL-210ENST00000582308 CYP2F1P24903 491 aa10.11□□□□□ -0.79
RFFL-210ENST00000582308 ADORA2BP29275 332 aa10.11□□□□□ -0.79
RFFL-210ENST00000582308 CA8P35219 290 aa10.11□□□□□ -0.79
RFFL-210ENST00000582308 NDUFV1P49821 464 aa10.11□□□□□ -0.79
RFFL-210ENST00000582308 CACNA2D1P54289 1103 aa10.11□□□□□ -0.79
RFFL-210ENST00000582308 CYP27A1Q02318 531 aa10.11□□□□□ -0.79
RFFL-210ENST00000582308 CREMQ03060 361 aa10.11□□□□□ -0.79
RFFL-210ENST00000582308 MAPK8IP2Q13387 824 aaPredicted RBP10.11□□□□□ -0.79
RFFL-210ENST00000582308 BMS1Q14692 1282 aaKnown RBP10.11□□□□□ -0.79
RFFL-210ENST00000582308 STILQ15468 1287 aa10.11□□□□□ -0.79
RFFL-210ENST00000582308 MAPRE1Q15691 268 aaKnown RBP10.11□□□□□ -0.79
RFFL-210ENST00000582308 NFE2Q16621 373 aaPredicted RBP10.11□□□□□ -0.79
RFFL-210ENST00000582308 GOLGA7BQ2TAP0 167 aa10.11□□□□□ -0.79
RFFL-210ENST00000582308 ASTE1Q2TB18 679 aaPredicted RBP10.11□□□□□ -0.79
RFFL-210ENST00000582308 PKDCCQ504Y2 493 aa10.11□□□□□ -0.79
RFFL-210ENST00000582308 TDRD12Q587J7 1177 aaKnown RBP10.11□□□□□ -0.79
RFFL-210ENST00000582308 FAM35AQ86V20 835 aa10.11□□□□□ -0.79
RFFL-210ENST00000582308 TTC30AQ86WT1 665 aa10.11□□□□□ -0.79
RFFL-210ENST00000582308 ZNF677Q86XU0 584 aa10.11□□□□□ -0.79
RFFL-210ENST00000582308 PALB2Q86YC2 1186 aa10.11□□□□□ -0.79
RFFL-210ENST00000582308 TTC9BQ8N6N2 239 aa10.11□□□□□ -0.79
RFFL-210ENST00000582308 SLC30A5Q8TAD4 765 aa10.11□□□□□ -0.79
RFFL-210ENST00000582308 ZNF461Q8TAF7 563 aa10.11□□□□□ -0.79
RFFL-210ENST00000582308 UBA3Q8TBC4 463 aa10.11□□□□□ -0.79
RFFL-210ENST00000582308 MICAL1Q8TDZ2 1067 aa10.11□□□□□ -0.79
RFFL-210ENST00000582308 LRCH3Q96II8 777 aa10.11□□□□□ -0.79
RFFL-210ENST00000582308 PGLYRP2Q96PD5 576 aa10.11□□□□□ -0.79
RFFL-210ENST00000582308 BAG1Q99933 345 aaPredicted RBP10.11□□□□□ -0.79
RFFL-210ENST00000582308 MED10Q9BTT4 135 aa10.11□□□□□ -0.79
RFFL-210ENST00000582308 ZNF518BQ9C0D4 1074 aa10.11□□□□□ -0.79
RFFL-210ENST00000582308 CRISPLD1Q9H336 500 aa10.11□□□□□ -0.79
RFFL-210ENST00000582308 NHEJ1Q9H9Q4 299 aaPredicted RBP10.11□□□□□ -0.79
RFFL-210ENST00000582308 TMEM30AQ9NV96 361 aa10.11□□□□□ -0.79
RFFL-210ENST00000582308 TSPAN16Q9UKR8 245 aa10.11□□□□□ -0.79
RFFL-210ENST00000582308 PCDHGC3Q9UN70 934 aa10.11□□□□□ -0.79
RFFL-210ENST00000582308 DENND4CQ5VZ89 1909 aa10.1□□□□□ -0.79
RFFL-210ENST00000582308 TMEM265A0A087WTH1 108 aa10.1□□□□□ -0.79
RFFL-210ENST00000582308 A0A087X0T9 212 aa10.1□□□□□ -0.79
RFFL-210ENST00000582308 SSU72P8A0A1W2PR75 194 aa10.1□□□□□ -0.79
RFFL-210ENST00000582308 SOWAHDA6NJG2 315 aa10.1□□□□□ -0.79
RFFL-210ENST00000582308 M0QYV0 167 aa10.1□□□□□ -0.79
RFFL-210ENST00000582308 TULP2O00295 520 aa10.1□□□□□ -0.79
RFFL-210ENST00000582308 BEST1O76090 585 aa10.1□□□□□ -0.79
RFFL-210ENST00000582308 SEC24AO95486 1093 aa10.1□□□□□ -0.79
RFFL-210ENST00000582308 FAM228BP0C875 321 aa10.1□□□□□ -0.79
RFFL-210ENST00000582308 CCZ1BP86790 482 aa10.1□□□□□ -0.79
RFFL-210ENST00000582308 CCZ1P86791 482 aaPredicted RBP10.1□□□□□ -0.79
RFFL-210ENST00000582308 ADCY1Q08828 1119 aa10.1□□□□□ -0.79
RFFL-210ENST00000582308 SMARCB1Q12824 385 aa10.1□□□□□ -0.79
RFFL-210ENST00000582308 DUSP4Q13115 394 aa10.1□□□□□ -0.79
RFFL-210ENST00000582308 MTF1Q14872 753 aa10.1□□□□□ -0.79
RFFL-210ENST00000582308 TPGS2Q68CL5 300 aa10.1□□□□□ -0.79
RFFL-210ENST00000582308 LILRA6Q6PI73 481 aa10.1□□□□□ -0.79
RFFL-210ENST00000582308 CYP26C1Q6V0L0 522 aa10.1□□□□□ -0.79
RFFL-210ENST00000582308 C4orf50Q6ZRC1 276 aa10.1□□□□□ -0.79
RFFL-210ENST00000582308 ADGRD2Q7Z7M1 963 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms