RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.06□□□□□ -0.64
CCDC47-203ENST00000580986 HMGXB4Q9UGU5 601 aa11.06□□□□□ -0.64
CCDC47-203ENST00000580986 AFF4Q9UHB7 1163 aaKnown RBP11.06□□□□□ -0.64
CCDC47-203ENST00000580986 PCDHB4Q9Y5E5 795 aa11.06□□□□□ -0.64
CCDC47-203ENST00000580986 CDY1Q9Y6F8 540 aa11.06□□□□□ -0.64
CCDC47-203ENST00000580986 HIDE1A8MVS5 230 aa11.05□□□□□ -0.64
CCDC47-203ENST00000580986 C2CD2LO14523 706 aa11.05□□□□□ -0.64
CCDC47-203ENST00000580986 MED7O43513 233 aa11.05□□□□□ -0.64
CCDC47-203ENST00000580986 NCK2O43639 380 aa11.05□□□□□ -0.64
CCDC47-203ENST00000580986 MFAP3LO75121 409 aa11.05□□□□□ -0.64
CCDC47-203ENST00000580986 POU2F2P09086 479 aa11.05□□□□□ -0.64
CCDC47-203ENST00000580986 KRT5P13647 590 aa11.05□□□□□ -0.64
CCDC47-203ENST00000580986 CPB1P15086 417 aa11.05□□□□□ -0.64
CCDC47-203ENST00000580986 FERP16591 822 aa11.05□□□□□ -0.64
CCDC47-203ENST00000580986 HOXA9P31269 272 aa11.05□□□□□ -0.64
CCDC47-203ENST00000580986 OR1D2P34982 312 aa11.05□□□□□ -0.64
CCDC47-203ENST00000580986 CLCN1P35523 988 aa11.05□□□□□ -0.64
CCDC47-203ENST00000580986 IRS1P35568 1242 aa11.05□□□□□ -0.64
CCDC47-203ENST00000580986 FXR1P51114 621 aaKnown RBP eCLIP11.05□□□□□ -0.64
CCDC47-203ENST00000580986 CLCN4P51793 760 aa11.05□□□□□ -0.64
CCDC47-203ENST00000580986 KCNC3Q14003 757 aa11.05□□□□□ -0.64
CCDC47-203ENST00000580986 GRIN2CQ14957 1233 aa11.05□□□□□ -0.64
CCDC47-203ENST00000580986 COL19A1Q14993 1142 aa11.05□□□□□ -0.64
CCDC47-203ENST00000580986 CNGA2Q16280 664 aa11.05□□□□□ -0.64
CCDC47-203ENST00000580986 DUSP6Q16828 381 aa11.05□□□□□ -0.64
CCDC47-203ENST00000580986 SGO2Q562F6 1265 aa11.05□□□□□ -0.64
CCDC47-203ENST00000580986 PLPP4Q5VZY2 271 aa11.05□□□□□ -0.64
CCDC47-203ENST00000580986 ELMSAN1Q6PJG2 1045 aa11.05□□□□□ -0.64
CCDC47-203ENST00000580986 RSPO2Q6UXX9 243 aaPredicted RBP11.05□□□□□ -0.64
CCDC47-203ENST00000580986 TMEM184AQ6ZMB5 413 aa11.05□□□□□ -0.64
CCDC47-203ENST00000580986 TCEAL8Q8IYN2 117 aa11.05□□□□□ -0.64
CCDC47-203ENST00000580986 MICAL1Q8TDZ2 1067 aa11.05□□□□□ -0.64
CCDC47-203ENST00000580986 EPS8L1Q8TE68 723 aa11.05□□□□□ -0.64
CCDC47-203ENST00000580986 PCED1BQ96HM7 432 aa11.05□□□□□ -0.64
CCDC47-203ENST00000580986 RHOBTB2Q9BYZ6 727 aa11.05□□□□□ -0.64
CCDC47-203ENST00000580986 PLEKHA4Q9H4M7 779 aa11.05□□□□□ -0.64
CCDC47-203ENST00000580986 CRTAC1Q9NQ79 661 aa11.05□□□□□ -0.64
CCDC47-203ENST00000580986 PCDHGC3Q9UN70 934 aa11.05□□□□□ -0.64
CCDC47-203ENST00000580986 BZW2Q9Y6E2 419 aaKnown RBP11.05□□□□□ -0.64
CCDC47-203ENST00000580986 MTCL1Q9Y4B5 1905 aaKnown RBP11.05□□□□□ -0.64
CCDC47-203ENST00000580986 ATP8B3O60423 1300 aa11.05□□□□□ -0.64
CCDC47-203ENST00000580986 PLXNA3P51805 1871 aa11.04□□□□□ -0.64
CCDC47-203ENST00000580986 MYBPHLA2RUH7 354 aa11.04□□□□□ -0.64
CCDC47-203ENST00000580986 MTMR11A4FU01 709 aa11.04□□□□□ -0.64
CCDC47-203ENST00000580986 LRRC53A6NM62 1247 aa11.04□□□□□ -0.64
CCDC47-203ENST00000580986 GOLGA6L6A8MZA4 724 aa11.04□□□□□ -0.64
CCDC47-203ENST00000580986 RNF225M0QZC1 329 aaPredicted RBP11.04□□□□□ -0.64
CCDC47-203ENST00000580986 TK2O00142 265 aa11.04□□□□□ -0.64
CCDC47-203ENST00000580986 O00370 1275 aa11.04□□□□□ -0.64
CCDC47-203ENST00000580986 ADAM12O43184 909 aa11.04□□□□□ -0.64
CCDC47-203ENST00000580986 GLUD1P00367 558 aa11.04□□□□□ -0.64
CCDC47-203ENST00000580986 PDGFRBP09619 1106 aa11.04□□□□□ -0.64
CCDC47-203ENST00000580986 ACAT1P24752 427 aaKnown RBP11.04□□□□□ -0.64
CCDC47-203ENST00000580986 ANXA13P27216 316 aa11.04□□□□□ -0.64
CCDC47-203ENST00000580986 GNA15P30679 374 aa11.04□□□□□ -0.64
CCDC47-203ENST00000580986 CASP14P31944 242 aa11.04□□□□□ -0.64
CCDC47-203ENST00000580986 KRT9P35527 623 aa11.04□□□□□ -0.64
CCDC47-203ENST00000580986 PDE6CP51160 858 aa11.04□□□□□ -0.64
CCDC47-203ENST00000580986 CDK17Q00537 523 aa11.04□□□□□ -0.64
CCDC47-203ENST00000580986 SLC39A12Q504Y0 691 aa11.04□□□□□ -0.64
CCDC47-203ENST00000580986 LCLAT1Q6UWP7 414 aa11.04□□□□□ -0.64
CCDC47-203ENST00000580986 TMC6Q7Z403 805 aa11.04□□□□□ -0.64
CCDC47-203ENST00000580986 IRF2BP2Q7Z5L9 587 aa11.04□□□□□ -0.64
CCDC47-203ENST00000580986 ACOT1Q86TX2 421 aa11.04□□□□□ -0.64
CCDC47-203ENST00000580986 LRRTM3Q86VH5 581 aa11.04□□□□□ -0.64
CCDC47-203ENST00000580986 FUKQ8N0W3 1084 aa11.04□□□□□ -0.64
CCDC47-203ENST00000580986 OR8K1Q8NGG5 319 aa11.04□□□□□ -0.64
CCDC47-203ENST00000580986 AUTS2Q8WXX7 1259 aa11.04□□□□□ -0.64
CCDC47-203ENST00000580986 ANP32BQ92688 251 aaKnown RBP11.04□□□□□ -0.64
CCDC47-203ENST00000580986 CYFIP2Q96F07 1278 aa11.04□□□□□ -0.64
CCDC47-203ENST00000580986 SMARCD1Q96GM5 515 aa11.04□□□□□ -0.64
CCDC47-203ENST00000580986 GAS2L1Q99501 681 aaPredicted RBP11.04□□□□□ -0.64
CCDC47-203ENST00000580986 DPEP3Q9H4B8 488 aa11.04□□□□□ -0.64
CCDC47-203ENST00000580986 PRDM12Q9H4Q4 367 aa11.04□□□□□ -0.64
CCDC47-203ENST00000580986 CSNK1G1Q9HCP0 422 aa11.04□□□□□ -0.64
CCDC47-203ENST00000580986 FBXW11Q9UKB1 542 aa11.04□□□□□ -0.64
CCDC47-203ENST00000580986 GTF3C4Q9UKN8 822 aa11.04□□□□□ -0.64
CCDC47-203ENST00000580986 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.04□□□□□ -0.64
CCDC47-203ENST00000580986 PCDHB5Q9Y5E4 795 aa11.04□□□□□ -0.64
CCDC47-203ENST00000580986 MTCH2Q9Y6C9 303 aa11.04□□□□□ -0.64
CCDC47-203ENST00000580986 PATJQ8NI35 1801 aa11.04□□□□□ -0.64
CCDC47-203ENST00000580986 SZT2Q5T011 3432 aa11.03□□□□□ -0.64
CCDC47-203ENST00000580986 AKR1B15C9JRZ8 316 aaPredicted RBP11.03□□□□□ -0.64
CCDC47-203ENST00000580986 CYP26A1O43174 497 aa11.03□□□□□ -0.64
CCDC47-203ENST00000580986 TGM5O43548 720 aa11.03□□□□□ -0.64
CCDC47-203ENST00000580986 CLASP2O75122 1294 aaKnown RBP11.03□□□□□ -0.64
CCDC47-203ENST00000580986 GFPT2O94808 682 aa11.03□□□□□ -0.64
CCDC47-203ENST00000580986 SETSIPP0DME0 302 aa11.03□□□□□ -0.64
CCDC47-203ENST00000580986 CYP11B1P15538 503 aa11.03□□□□□ -0.64
CCDC47-203ENST00000580986 FECHP22830 423 aa11.03□□□□□ -0.64
CCDC47-203ENST00000580986 KLRC2P26717 231 aa11.03□□□□□ -0.64
CCDC47-203ENST00000580986 CDH5P33151 784 aaPredicted RBP11.03□□□□□ -0.64
CCDC47-203ENST00000580986 TUFMP49411 452 aaKnown RBP11.03□□□□□ -0.64
CCDC47-203ENST00000580986 BCAT1P54687 386 aa11.03□□□□□ -0.64
CCDC47-203ENST00000580986 GSDMDP57764 484 aa11.03□□□□□ -0.64
CCDC47-203ENST00000580986 PSMC1P62191 440 aaKnown RBP11.03□□□□□ -0.64
CCDC47-203ENST00000580986 PTPN21Q16825 1174 aa11.03□□□□□ -0.64
CCDC47-203ENST00000580986 PKDCCQ504Y2 493 aa11.03□□□□□ -0.64
CCDC47-203ENST00000580986 ZNF394Q53GI3 561 aa11.03□□□□□ -0.64
CCDC47-203ENST00000580986 MDH1BQ5I0G3 518 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms