RNA–Protein interactions for RNA: ENST00000580751.5

SS18-216, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-216ENST00000580751 MTCL1Q9Y4B5 1905 aaKnown RBP16.51■□□□□ 0.23
SS18-216ENST00000580751 MYBPHLA2RUH7 354 aa16.5■□□□□ 0.23
SS18-216ENST00000580751 MFAP3LO75121 409 aa16.5■□□□□ 0.23
SS18-216ENST00000580751 ZMYND10O75800 440 aa16.5■□□□□ 0.23
SS18-216ENST00000580751 HNRNPA1P09651 372 aaKnown RBP eCLIP16.5■□□□□ 0.23
SS18-216ENST00000580751 PTPN1P18031 435 aaKnown RBP16.5■□□□□ 0.23
SS18-216ENST00000580751 KCNA5P22460 613 aa16.5■□□□□ 0.23
SS18-216ENST00000580751 LTBRP36941 435 aa16.5■□□□□ 0.23
SS18-216ENST00000580751 CFAP221Q4G0U5 840 aa16.5■□□□□ 0.23
SS18-216ENST00000580751 MDH1BQ5I0G3 518 aa16.5■□□□□ 0.23
SS18-216ENST00000580751 PPM1LQ5SGD2 360 aa16.5■□□□□ 0.23
SS18-216ENST00000580751 SPATA2LQ8IUW3 424 aaPredicted RBP16.5■□□□□ 0.23
SS18-216ENST00000580751 CRYBG2Q8N1P7 616 aa16.5■□□□□ 0.23
SS18-216ENST00000580751 UBR7Q8N806 425 aa16.5■□□□□ 0.23
SS18-216ENST00000580751 ATAD1Q8NBU5 361 aa16.5■□□□□ 0.23
SS18-216ENST00000580751 CMASQ8NFW8 434 aaPredicted RBP16.5■□□□□ 0.23
SS18-216ENST00000580751 OR8K1Q8NGG5 319 aa16.5■□□□□ 0.23
SS18-216ENST00000580751 MYLPFQ96A32 169 aa16.5■□□□□ 0.23
SS18-216ENST00000580751 LSM14BQ9BX40 385 aaKnown RBP16.5■□□□□ 0.23
SS18-216ENST00000580751 NAA15Q9BXJ9 866 aaKnown RBP16.5■□□□□ 0.23
SS18-216ENST00000580751 UBE2TQ9NPD8 197 aaPredicted RBP16.5■□□□□ 0.23
SS18-216ENST00000580751 FAM207AQ9NSI2 230 aaPredicted RBP16.5■□□□□ 0.23
SS18-216ENST00000580751 ABI2Q9NYB9 513 aaPredicted RBP16.5■□□□□ 0.23
SS18-216ENST00000580751 INSL5Q9Y5Q6 135 aa16.5■□□□□ 0.23
SS18-216ENST00000580751 ATP2C2O75185 946 aa16.49■□□□□ 0.23
SS18-216ENST00000580751 SLC34A2O95436 690 aa16.49■□□□□ 0.23
SS18-216ENST00000580751 SEC24AO95486 1093 aa16.49■□□□□ 0.23
SS18-216ENST00000580751 VNN2O95498 520 aa16.49■□□□□ 0.23
SS18-216ENST00000580751 UCHL3P15374 230 aa16.49■□□□□ 0.23
SS18-216ENST00000580751 HNRNPH3P31942 346 aaKnown RBP16.49■□□□□ 0.23
SS18-216ENST00000580751 TUFMP49411 452 aaKnown RBP16.49■□□□□ 0.23
SS18-216ENST00000580751 CYP27A1Q02318 531 aa16.49■□□□□ 0.23
SS18-216ENST00000580751 ITIH3Q06033 890 aa16.49■□□□□ 0.23
SS18-216ENST00000580751 DLX2Q07687 328 aaPredicted RBP16.49■□□□□ 0.23
SS18-216ENST00000580751 DUSP4Q13115 394 aa16.49■□□□□ 0.23
SS18-216ENST00000580751 PLD1Q13393 1074 aa16.49■□□□□ 0.23
SS18-216ENST00000580751 DPY19L2P1Q6NXN4 242 aa16.49■□□□□ 0.23
SS18-216ENST00000580751 SYCE2Q6PIF2 218 aa16.49■□□□□ 0.23
SS18-216ENST00000580751 CYP26C1Q6V0L0 522 aa16.49■□□□□ 0.23
SS18-216ENST00000580751 CACNA2D4Q7Z3S7 1137 aa16.49■□□□□ 0.23
SS18-216ENST00000580751 ACOT1Q86TX2 421 aa16.49■□□□□ 0.23
SS18-216ENST00000580751 TC2NQ8N9U0 490 aa16.49■□□□□ 0.23
SS18-216ENST00000580751 WHAMMQ8TF30 809 aa16.49■□□□□ 0.23
SS18-216ENST00000580751 KAT5Q92993 513 aa16.49■□□□□ 0.23
SS18-216ENST00000580751 PCED1BQ96HM7 432 aa16.49■□□□□ 0.23
SS18-216ENST00000580751 MSLNLQ96KJ4 702 aa16.49■□□□□ 0.23
SS18-216ENST00000580751 KREMEN1Q96MU8 473 aa16.49■□□□□ 0.23
SS18-216ENST00000580751 TWNKQ96RR1 684 aa16.49■□□□□ 0.23
SS18-216ENST00000580751 DNAJC7Q99615 494 aa16.49■□□□□ 0.23
SS18-216ENST00000580751 ELOVL4Q9GZR5 314 aa16.49■□□□□ 0.23
SS18-216ENST00000580751 GANQ9H2C0 597 aa16.49■□□□□ 0.23
SS18-216ENST00000580751 SIX2Q9NPC8 291 aa16.49■□□□□ 0.23
SS18-216ENST00000580751 TMLHEQ9NVH6 421 aa16.49■□□□□ 0.23
SS18-216ENST00000580751 CD207Q9UJ71 328 aa16.49■□□□□ 0.23
SS18-216ENST00000580751 YIPF1Q9Y548 306 aa16.49■□□□□ 0.23
SS18-216ENST00000580751 ATP8B3O60423 1300 aa16.48■□□□□ 0.23
SS18-216ENST00000580751 XIRP2A4UGR9 3374 aa16.48■□□□□ 0.23
SS18-216ENST00000580751 H3BQ06 376 aaPredicted RBP16.48■□□□□ 0.23
SS18-216ENST00000580751 XYLBO75191 536 aa16.48■□□□□ 0.23
SS18-216ENST00000580751 NOL4O94818 638 aa16.48■□□□□ 0.23
SS18-216ENST00000580751 PAPLNO95428 1278 aa16.48■□□□□ 0.23
SS18-216ENST00000580751 LRG1P02750 347 aa16.48■□□□□ 0.23
SS18-216ENST00000580751 POU2F2P09086 479 aa16.48■□□□□ 0.23
SS18-216ENST00000580751 ACO1P21399 889 aaKnown RBP16.48■□□□□ 0.23
SS18-216ENST00000580751 FECHP22830 423 aa16.48■□□□□ 0.23
SS18-216ENST00000580751 CASP14P31944 242 aa16.48■□□□□ 0.23
SS18-216ENST00000580751 KRT9P35527 623 aa16.48■□□□□ 0.23
SS18-216ENST00000580751 MAGEA11P43364 429 aa16.48■□□□□ 0.23
SS18-216ENST00000580751 CDK17Q00537 523 aa16.48■□□□□ 0.23
SS18-216ENST00000580751 ORC1Q13415 861 aa16.48■□□□□ 0.23
SS18-216ENST00000580751 CCDC142Q17RM4 750 aa16.48■□□□□ 0.23
SS18-216ENST00000580751 MGAT5BQ3V5L5 792 aa16.48■□□□□ 0.23
SS18-216ENST00000580751 ZNF394Q53GI3 561 aa16.48■□□□□ 0.23
SS18-216ENST00000580751 CES5AQ6NT32 575 aa16.48■□□□□ 0.23
SS18-216ENST00000580751 TMEM270Q6UE05 265 aa16.48■□□□□ 0.23
SS18-216ENST00000580751 LRRC8AQ8IWT6 810 aa16.48■□□□□ 0.23
SS18-216ENST00000580751 SMRP1Q8NCR6 262 aa16.48■□□□□ 0.23
SS18-216ENST00000580751 TMEM176AQ96HP8 235 aa16.48■□□□□ 0.23
SS18-216ENST00000580751 SEPT5Q99719 369 aaPredicted RBP16.48■□□□□ 0.23
SS18-216ENST00000580751 RHOBTB2Q9BYZ6 727 aa16.48■□□□□ 0.23
SS18-216ENST00000580751 CRISPLD1Q9H336 500 aa16.48■□□□□ 0.23
SS18-216ENST00000580751 ZNHIT6Q9NWK9 470 aaKnown RBP16.48■□□□□ 0.23
SS18-216ENST00000580751 THEGQ9P2T0 379 aa16.48■□□□□ 0.23
SS18-216ENST00000580751 PCDHB4Q9Y5E5 795 aa16.48■□□□□ 0.23
SS18-216ENST00000580751 RFPL2O75678 378 aa16.47■□□□□ 0.23
SS18-216ENST00000580751 CCDC172P0C7W6 258 aa16.47■□□□□ 0.23
SS18-216ENST00000580751 HAPLN1P10915 354 aaPredicted RBP16.47■□□□□ 0.23
SS18-216ENST00000580751 ALDH1A3P47895 512 aa16.47■□□□□ 0.23
SS18-216ENST00000580751 RAD23BP54727 409 aa16.47■□□□□ 0.23
SS18-216ENST00000580751 APBA1Q02410 837 aa16.47■□□□□ 0.23
SS18-216ENST00000580751 AAK1Q2M2I8 961 aa16.47■□□□□ 0.23
SS18-216ENST00000580751 LEXMQ3ZCV2 418 aa16.47■□□□□ 0.23
SS18-216ENST00000580751 RARS2Q5T160 578 aaKnown RBP16.47■□□□□ 0.23
SS18-216ENST00000580751 GJB7Q6PEY0 223 aa16.47■□□□□ 0.23
SS18-216ENST00000580751 VSTM1Q6UX27 236 aa16.47■□□□□ 0.23
SS18-216ENST00000580751 TMC5Q6UXY8 1006 aa16.47■□□□□ 0.23
SS18-216ENST00000580751 SLC4A11Q8NBS3 891 aa16.47■□□□□ 0.23
SS18-216ENST00000580751 RBBP8NLQ8NC74 664 aaPredicted RBP16.47■□□□□ 0.23
SS18-216ENST00000580751 BAP1Q92560 729 aa16.47■□□□□ 0.23
SS18-216ENST00000580751 STK33Q9BYT3 514 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms