RNA–Protein interactions for RNA: ENST00000580583.5

PPP4R1-217, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 5

Gene PPP4R1, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-217ENST00000580583 ZIM3Q96PE6 472 aa6.66□□□□□ -1.34
PPP4R1-217ENST00000580583 SLITRK1Q96PX8 696 aa6.66□□□□□ -1.34
PPP4R1-217ENST00000580583 ZIC5Q96T25 663 aa6.66□□□□□ -1.34
PPP4R1-217ENST00000580583 SH3GL2Q99962 352 aa6.66□□□□□ -1.34
PPP4R1-217ENST00000580583 MRPL45Q9BRJ2 306 aaKnown RBP6.66□□□□□ -1.34
PPP4R1-217ENST00000580583 HERPUD2Q9BSE4 406 aa6.66□□□□□ -1.34
PPP4R1-217ENST00000580583 DCLK3Q9C098 648 aa6.66□□□□□ -1.34
PPP4R1-217ENST00000580583 SENP6Q9GZR1 1112 aaPredicted RBP6.66□□□□□ -1.34
PPP4R1-217ENST00000580583 CXCL16Q9H2A7 254 aa6.66□□□□□ -1.34
PPP4R1-217ENST00000580583 GPBP1L1Q9HC44 474 aaPredicted RBP6.66□□□□□ -1.34
PPP4R1-217ENST00000580583 ZDHHC18Q9NUE0 388 aa6.66□□□□□ -1.34
PPP4R1-217ENST00000580583 KLHL11Q9NVR0 708 aa6.66□□□□□ -1.34
PPP4R1-217ENST00000580583 GRHL1Q9NZI5 618 aa6.66□□□□□ -1.34
PPP4R1-217ENST00000580583 HESX1Q9UBX0 185 aa6.66□□□□□ -1.34
PPP4R1-217ENST00000580583 TJP2Q9UDY2 1190 aa6.66□□□□□ -1.34
PPP4R1-217ENST00000580583 MTRF1LQ9UGC7 380 aaKnown RBP6.66□□□□□ -1.34
PPP4R1-217ENST00000580583 UTRNP46939 3433 aa6.65□□□□□ -1.34
PPP4R1-217ENST00000580583 hCG_1818297A0A087WSY0 165 aa6.65□□□□□ -1.34
PPP4R1-217ENST00000580583 LRRD1A4D1F6 860 aa6.65□□□□□ -1.34
PPP4R1-217ENST00000580583 GOLGA6CA6NDK9 693 aa6.65□□□□□ -1.34
PPP4R1-217ENST00000580583 GOLGA6L10A6NI86 522 aa6.65□□□□□ -1.34
PPP4R1-217ENST00000580583 F8VP50 259 aa6.65□□□□□ -1.34
PPP4R1-217ENST00000580583 AGPSO00116 658 aa6.65□□□□□ -1.34
PPP4R1-217ENST00000580583 PIRO00625 290 aa6.65□□□□□ -1.34
PPP4R1-217ENST00000580583 DPYSL4O14531 572 aa6.65□□□□□ -1.34
PPP4R1-217ENST00000580583 KIF3CO14782 793 aa6.65□□□□□ -1.34
PPP4R1-217ENST00000580583 PPFIA2O75334 1257 aa6.65□□□□□ -1.34
PPP4R1-217ENST00000580583 LRCH4O75427 683 aa6.65□□□□□ -1.34
PPP4R1-217ENST00000580583 RPS6KA5O75582 802 aa6.65□□□□□ -1.34
PPP4R1-217ENST00000580583 CTSHP09668 335 aa6.65□□□□□ -1.34
PPP4R1-217ENST00000580583 GOLGA6DP0CG33 693 aa6.65□□□□□ -1.34
PPP4R1-217ENST00000580583 ATF2P15336 505 aa6.65□□□□□ -1.34
PPP4R1-217ENST00000580583 TCF4P15884 667 aa6.65□□□□□ -1.34
PPP4R1-217ENST00000580583 LRPAP1P30533 357 aa6.65□□□□□ -1.34
PPP4R1-217ENST00000580583 RFC1P35251 1148 aaPredicted RBP6.65□□□□□ -1.34
PPP4R1-217ENST00000580583 HSD17B3P37058 310 aa6.65□□□□□ -1.34
PPP4R1-217ENST00000580583 GPD2P43304 727 aa6.65□□□□□ -1.34
PPP4R1-217ENST00000580583 RPL21P46778 160 aaKnown RBP6.65□□□□□ -1.34
PPP4R1-217ENST00000580583 GABRB2P47870 512 aa6.65□□□□□ -1.34
PPP4R1-217ENST00000580583 RAB27AP51159 221 aa6.65□□□□□ -1.34
PPP4R1-217ENST00000580583 DRG2P55039 364 aaKnown RBP6.65□□□□□ -1.34
PPP4R1-217ENST00000580583 SNX16P57768 344 aa6.65□□□□□ -1.34
PPP4R1-217ENST00000580583 COPS2P61201 443 aa6.65□□□□□ -1.34
PPP4R1-217ENST00000580583 SLC25A11Q02978 314 aaKnown RBP6.65□□□□□ -1.34
PPP4R1-217ENST00000580583 MGAT3Q09327 533 aa6.65□□□□□ -1.34
PPP4R1-217ENST00000580583 NFX1Q12986 1120 aaKnown RBP6.65□□□□□ -1.34
PPP4R1-217ENST00000580583 TRIM32Q13049 653 aa6.65□□□□□ -1.34
PPP4R1-217ENST00000580583 CALCOCO2Q13137 446 aa6.65□□□□□ -1.34
PPP4R1-217ENST00000580583 ZNF268Q14587 947 aaPredicted RBP6.65□□□□□ -1.34
PPP4R1-217ENST00000580583 HADHQ16836 314 aaKnown RBP6.65□□□□□ -1.34
PPP4R1-217ENST00000580583 SOWAHAQ2M3V2 549 aa6.65□□□□□ -1.34
PPP4R1-217ENST00000580583 TFDP3Q5H9I0 405 aa6.65□□□□□ -1.34
PPP4R1-217ENST00000580583 GDF6Q6KF10 455 aaPredicted RBP6.65□□□□□ -1.34
PPP4R1-217ENST00000580583 LRIG3Q6UXM1 1119 aa6.65□□□□□ -1.34
PPP4R1-217ENST00000580583 SPOCD1Q6ZMY3 1216 aa6.65□□□□□ -1.34
PPP4R1-217ENST00000580583 FAM183BPQ6ZVS7 135 aa6.65□□□□□ -1.34
PPP4R1-217ENST00000580583 ACOT1Q86TX2 421 aa6.65□□□□□ -1.34
PPP4R1-217ENST00000580583 RPAINQ86UA6 219 aa6.65□□□□□ -1.34
PPP4R1-217ENST00000580583 ADGRF2Q8IZF7 708 aa6.65□□□□□ -1.34
PPP4R1-217ENST00000580583 OR6B3Q8NGW1 331 aa6.65□□□□□ -1.34
PPP4R1-217ENST00000580583 UBA3Q8TBC4 463 aa6.65□□□□□ -1.34
PPP4R1-217ENST00000580583 KBTBD7Q8WVZ9 684 aa6.65□□□□□ -1.34
PPP4R1-217ENST00000580583 C1orf54Q8WWF1 131 aa6.65□□□□□ -1.34
PPP4R1-217ENST00000580583 ATG4AQ8WYN0 398 aa6.65□□□□□ -1.34
PPP4R1-217ENST00000580583 RIN2Q8WYP3 895 aaPredicted RBP6.65□□□□□ -1.34
PPP4R1-217ENST00000580583 EXOC4Q96A65 974 aa6.65□□□□□ -1.34
PPP4R1-217ENST00000580583 RNF25Q96BH1 459 aaPredicted RBP6.65□□□□□ -1.34
PPP4R1-217ENST00000580583 SNF8Q96H20 258 aa6.65□□□□□ -1.34
PPP4R1-217ENST00000580583 SNX25Q9H3E2 840 aa6.65□□□□□ -1.34
PPP4R1-217ENST00000580583 FAM204AQ9H8W3 233 aa6.65□□□□□ -1.34
PPP4R1-217ENST00000580583 CHST12Q9NRB3 414 aa6.65□□□□□ -1.34
PPP4R1-217ENST00000580583 CHST7Q9NS84 486 aa6.65□□□□□ -1.34
PPP4R1-217ENST00000580583 FAM49BQ9NUQ9 324 aa6.65□□□□□ -1.34
PPP4R1-217ENST00000580583 SLC38A7Q9NVC3 462 aa6.65□□□□□ -1.34
PPP4R1-217ENST00000580583 GDAP2Q9NXN4 497 aa6.65□□□□□ -1.34
PPP4R1-217ENST00000580583 GOLGA6AQ9NYA3 693 aa6.65□□□□□ -1.34
PPP4R1-217ENST00000580583 KLK14Q9P0G3 267 aa6.65□□□□□ -1.34
PPP4R1-217ENST00000580583 ASIC3Q9UHC3 531 aa6.65□□□□□ -1.34
PPP4R1-217ENST00000580583 R3HDM2Q9Y2K5 976 aaKnown RBP6.65□□□□□ -1.34
PPP4R1-217ENST00000580583 PTPN22Q9Y2R2 807 aa6.65□□□□□ -1.34
PPP4R1-217ENST00000580583 SNX24Q9Y343 169 aa6.65□□□□□ -1.34
PPP4R1-217ENST00000580583 DOCK3Q8IZD9 2030 aa6.65□□□□□ -1.35
PPP4R1-217ENST00000580583 TSC2P49815 1807 aa6.64□□□□□ -1.35
PPP4R1-217ENST00000580583 A8MXQ7 604 aa6.64□□□□□ -1.35
PPP4R1-217ENST00000580583 KPNA7A9QM74 516 aa6.64□□□□□ -1.35
PPP4R1-217ENST00000580583 E5RJQ4 531 aa6.64□□□□□ -1.35
PPP4R1-217ENST00000580583 PI4K2BG5E9Z4 385 aa6.64□□□□□ -1.35
PPP4R1-217ENST00000580583 PTGESO14684 152 aa6.64□□□□□ -1.35
PPP4R1-217ENST00000580583 SPTLC1O15269 473 aa6.64□□□□□ -1.35
PPP4R1-217ENST00000580583 HUS1O60921 280 aa6.64□□□□□ -1.35
PPP4R1-217ENST00000580583 RNF8O76064 485 aa6.64□□□□□ -1.35
PPP4R1-217ENST00000580583 TJP3O95049 919 aa6.64□□□□□ -1.35
PPP4R1-217ENST00000580583 ASGR1P07306 291 aa6.64□□□□□ -1.35
PPP4R1-217ENST00000580583 PFKMP08237 780 aa6.64□□□□□ -1.35
PPP4R1-217ENST00000580583 ELNP15502 786 aa6.64□□□□□ -1.35
PPP4R1-217ENST00000580583 DESP17661 470 aa6.64□□□□□ -1.35
PPP4R1-217ENST00000580583 GPD1P21695 349 aa6.64□□□□□ -1.35
PPP4R1-217ENST00000580583 WARSP23381 471 aaKnown RBP6.64□□□□□ -1.35
PPP4R1-217ENST00000580583 CCND3P30281 292 aaPredicted RBP6.64□□□□□ -1.35
PPP4R1-217ENST00000580583 PCK1P35558 622 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms