RNA–Protein interactions for RNA: ENST00000580573.1

KPNB1-210, Transcript of karyopherin subunit beta 1, humanhuman

TSL 3

Gene KPNB1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-210ENST00000580573 STK32AQ8WU08 396 aa8.45□□□□□ -1.06
KPNB1-210ENST00000580573 ZNF689Q96CS4 500 aaPredicted RBP8.45□□□□□ -1.06
KPNB1-210ENST00000580573 TNIP3Q96KP6 325 aa8.45□□□□□ -1.06
KPNB1-210ENST00000580573 ALS2CR12Q96Q35 445 aa8.45□□□□□ -1.06
KPNB1-210ENST00000580573 PKMYT1Q99640 499 aa8.45□□□□□ -1.06
KPNB1-210ENST00000580573 RTP3Q9BQQ7 232 aa8.45□□□□□ -1.06
KPNB1-210ENST00000580573 TMEM175Q9BSA9 504 aa8.45□□□□□ -1.06
KPNB1-210ENST00000580573 TUBB2BQ9BVA1 445 aa8.45□□□□□ -1.06
KPNB1-210ENST00000580573 TLR10Q9BXR5 811 aa8.45□□□□□ -1.06
KPNB1-210ENST00000580573 MRPL9Q9BYD2 267 aaKnown RBP8.45□□□□□ -1.06
KPNB1-210ENST00000580573 PPP1R12CQ9BZL4 782 aa8.45□□□□□ -1.06
KPNB1-210ENST00000580573 ZMYND15Q9H091 742 aa8.45□□□□□ -1.06
KPNB1-210ENST00000580573 OSGEPQ9NPF4 335 aa8.45□□□□□ -1.06
KPNB1-210ENST00000580573 CYLDQ9NQC7 956 aa8.45□□□□□ -1.06
KPNB1-210ENST00000580573 CACNG4Q9UBN1 327 aa8.45□□□□□ -1.06
KPNB1-210ENST00000580573 CYTH4Q9UIA0 394 aa8.45□□□□□ -1.06
KPNB1-210ENST00000580573 MRFAP1Q9Y605 127 aa8.45□□□□□ -1.06
KPNB1-210ENST00000580573 MYO16Q9Y6X6 1858 aa8.45□□□□□ -1.06
KPNB1-210ENST00000580573 ARHGEF37A1IGU5 675 aa8.44□□□□□ -1.06
KPNB1-210ENST00000580573 TMCO5BA8MYB1 307 aa8.44□□□□□ -1.06
KPNB1-210ENST00000580573 CES2O00748 559 aa8.44□□□□□ -1.06
KPNB1-210ENST00000580573 CYB561D2O14569 222 aa8.44□□□□□ -1.06
KPNB1-210ENST00000580573 HRO43593 1189 aa8.44□□□□□ -1.06
KPNB1-210ENST00000580573 BUB1BO60566 1050 aaPredicted RBP8.44□□□□□ -1.06
KPNB1-210ENST00000580573 EFCAB14O75071 495 aa8.44□□□□□ -1.06
KPNB1-210ENST00000580573 RNF40O75150 1001 aa8.44□□□□□ -1.06
KPNB1-210ENST00000580573 PALMO75781 387 aa8.44□□□□□ -1.06
KPNB1-210ENST00000580573 DGKIO75912 1065 aa8.44□□□□□ -1.06
KPNB1-210ENST00000580573 BAIAP3O94812 1187 aa8.44□□□□□ -1.06
KPNB1-210ENST00000580573 MICAL2O94851 1124 aa8.44□□□□□ -1.06
KPNB1-210ENST00000580573 KIF4AO95239 1232 aa8.44□□□□□ -1.06
KPNB1-210ENST00000580573 ATP1A1P05023 1023 aaKnown RBP8.44□□□□□ -1.06
KPNB1-210ENST00000580573 ITGB1P05556 798 aa8.44□□□□□ -1.06
KPNB1-210ENST00000580573 CALB1P05937 261 aa8.44□□□□□ -1.06
KPNB1-210ENST00000580573 ODC1P11926 461 aa8.44□□□□□ -1.06
KPNB1-210ENST00000580573 ABCB4P21439 1286 aa8.44□□□□□ -1.06
KPNB1-210ENST00000580573 RRM1P23921 792 aa8.44□□□□□ -1.06
KPNB1-210ENST00000580573 LMO2P25791 158 aa8.44□□□□□ -1.06
KPNB1-210ENST00000580573 CASQ1P31415 396 aa8.44□□□□□ -1.06
KPNB1-210ENST00000580573 GNL1P36915 607 aaPredicted RBP8.44□□□□□ -1.06
KPNB1-210ENST00000580573 LHX1P48742 406 aa8.44□□□□□ -1.06
KPNB1-210ENST00000580573 PDCLQ13371 301 aa8.44□□□□□ -1.06
KPNB1-210ENST00000580573 IKBKEQ14164 716 aa8.44□□□□□ -1.06
KPNB1-210ENST00000580573 PTPN20Q4JDL3 420 aa8.44□□□□□ -1.06
KPNB1-210ENST00000580573 DNTTIP2Q5QJE6 756 aaKnown RBP8.44□□□□□ -1.06
KPNB1-210ENST00000580573 PPP1R26Q5T8A7 1209 aaPredicted RBP8.44□□□□□ -1.06
KPNB1-210ENST00000580573 KIAA0319Q5VV43 1072 aa8.44□□□□□ -1.06
KPNB1-210ENST00000580573 WSCD1Q658N2 575 aa8.44□□□□□ -1.06
KPNB1-210ENST00000580573 ZNF572Q7Z3I7 529 aaPredicted RBP8.44□□□□□ -1.06
KPNB1-210ENST00000580573 TTC30AQ86WT1 665 aa8.44□□□□□ -1.06
KPNB1-210ENST00000580573 RNF168Q8IYW5 571 aaPredicted RBP8.44□□□□□ -1.06
KPNB1-210ENST00000580573 RNF169Q8NCN4 708 aa8.44□□□□□ -1.06
KPNB1-210ENST00000580573 B3GALNT2Q8NCR0 500 aa8.44□□□□□ -1.06
KPNB1-210ENST00000580573 C3orf20Q8ND61 904 aa8.44□□□□□ -1.06
KPNB1-210ENST00000580573 C1orf131Q8NDD1 294 aaKnown RBP8.44□□□□□ -1.06
KPNB1-210ENST00000580573 SLC35F5Q8WV83 523 aa8.44□□□□□ -1.06
KPNB1-210ENST00000580573 CPA5Q8WXQ8 436 aa8.44□□□□□ -1.06
KPNB1-210ENST00000580573 CD101Q93033 1021 aa8.44□□□□□ -1.06
KPNB1-210ENST00000580573 ZNF653Q96CK0 615 aa8.44□□□□□ -1.06
KPNB1-210ENST00000580573 MCRS1Q96EZ8 462 aa8.44□□□□□ -1.06
KPNB1-210ENST00000580573 HES6Q96HZ4 224 aa8.44□□□□□ -1.06
KPNB1-210ENST00000580573 LRCH3Q96II8 777 aa8.44□□□□□ -1.06
KPNB1-210ENST00000580573 HNRNPABQ99729 332 aaKnown RBP8.44□□□□□ -1.06
KPNB1-210ENST00000580573 DPEP3Q9H4B8 488 aa8.44□□□□□ -1.06
KPNB1-210ENST00000580573 NRDE2Q9H7Z3 1164 aa8.44□□□□□ -1.06
KPNB1-210ENST00000580573 SEPT11Q9NVA2 429 aaKnown RBP8.44□□□□□ -1.06
KPNB1-210ENST00000580573 MARCH5Q9NX47 278 aa8.44□□□□□ -1.06
KPNB1-210ENST00000580573 CNOT8Q9UFF9 292 aaKnown RBP8.44□□□□□ -1.06
KPNB1-210ENST00000580573 TSPAN16Q9UKR8 245 aa8.44□□□□□ -1.06
KPNB1-210ENST00000580573 DSEQ9UL01 958 aa8.44□□□□□ -1.06
KPNB1-210ENST00000580573 STRIP2Q9ULQ0 834 aa8.44□□□□□ -1.06
KPNB1-210ENST00000580573 PCDHB7Q9Y5E2 793 aa8.44□□□□□ -1.06
KPNB1-210ENST00000580573 GBF1Q92538 1859 aa8.43□□□□□ -1.06
KPNB1-210ENST00000580573 PLXNA4Q9HCM2 1894 aa8.43□□□□□ -1.06
KPNB1-210ENST00000580573 A8MXQ7 604 aa8.43□□□□□ -1.06
KPNB1-210ENST00000580573 SYN3O14994 580 aa8.43□□□□□ -1.06
KPNB1-210ENST00000580573 HCRTO43612 131 aa8.43□□□□□ -1.06
KPNB1-210ENST00000580573 BUB1O43683 1085 aa8.43□□□□□ -1.06
KPNB1-210ENST00000580573 B3GAT3O94766 335 aa8.43□□□□□ -1.06
KPNB1-210ENST00000580573 CLSTN1O94985 981 aa8.43□□□□□ -1.06
KPNB1-210ENST00000580573 OAZ2O95190 189 aa8.43□□□□□ -1.06
KPNB1-210ENST00000580573 CD19P15391 556 aa8.43□□□□□ -1.06
KPNB1-210ENST00000580573 NDUFV2P19404 249 aa8.43□□□□□ -1.06
KPNB1-210ENST00000580573 GTF2F1P35269 517 aaKnown RBP eCLIP8.43□□□□□ -1.06
KPNB1-210ENST00000580573 SCNN1AP37088 669 aa8.43□□□□□ -1.06
KPNB1-210ENST00000580573 PLA2G4AP47712 749 aa8.43□□□□□ -1.06
KPNB1-210ENST00000580573 PLCB3Q01970 1234 aa8.43□□□□□ -1.06
KPNB1-210ENST00000580573 TAP1Q03518 808 aa8.43□□□□□ -1.06
KPNB1-210ENST00000580573 ORC1Q13415 861 aa8.43□□□□□ -1.06
KPNB1-210ENST00000580573 MAMLD1Q13495 774 aa8.43□□□□□ -1.06
KPNB1-210ENST00000580573 MRPL58Q14197 206 aaKnown RBP8.43□□□□□ -1.06
KPNB1-210ENST00000580573 FAM171BQ6P995 826 aa8.43□□□□□ -1.06
KPNB1-210ENST00000580573 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.43□□□□□ -1.064e-9■□□□□ 11
KPNB1-210ENST00000580573 MMS22LQ6ZRQ5 1243 aa8.43□□□□□ -1.06
KPNB1-210ENST00000580573 PAQR9Q6ZVX9 377 aa8.43□□□□□ -1.06
KPNB1-210ENST00000580573 TMEM110Q86TL2 294 aa8.43□□□□□ -1.06
KPNB1-210ENST00000580573 ACOT1Q86TX2 421 aa8.43□□□□□ -1.06
KPNB1-210ENST00000580573 NT5DC3Q86UY8 548 aa8.43□□□□□ -1.06
KPNB1-210ENST00000580573 PASD1Q8IV76 773 aa8.43□□□□□ -1.06
KPNB1-210ENST00000580573 SYCE1Q8N0S2 351 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms