RNA–Protein interactions for RNA: ENST00000580446.1

CSNK1D-213, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-213ENST00000580446 GUCY2FP51841 1108 aa15.3■□□□□ 0.04
CSNK1D-213ENST00000580446 EXOSC10Q01780 885 aaKnown RBP15.3■□□□□ 0.04
CSNK1D-213ENST00000580446 BNC1Q01954 994 aa15.3■□□□□ 0.04
CSNK1D-213ENST00000580446 FLNCQ14315 2725 aa15.3■□□□□ 0.04
CSNK1D-213ENST00000580446 SMAD1Q15797 465 aaKnown RBP15.3■□□□□ 0.04
CSNK1D-213ENST00000580446 SLC39A12Q504Y0 691 aa15.3■□□□□ 0.04
CSNK1D-213ENST00000580446 XKR4Q5GH76 650 aa15.3■□□□□ 0.04
CSNK1D-213ENST00000580446 USP37Q86T82 979 aa15.3■□□□□ 0.04
CSNK1D-213ENST00000580446 C12orf40Q86WS4 652 aa15.3■□□□□ 0.04
CSNK1D-213ENST00000580446 DEPTORQ8TB45 409 aa15.3■□□□□ 0.04
CSNK1D-213ENST00000580446 CCDC94Q9BW85 323 aaPredicted RBP15.3■□□□□ 0.04
CSNK1D-213ENST00000580446 KIF9Q9HAQ2 790 aa15.3■□□□□ 0.04
CSNK1D-213ENST00000580446 TM7SF3Q9NS93 570 aa15.3■□□□□ 0.04
CSNK1D-213ENST00000580446 NXF1Q9UBU9 619 aaKnown RBP15.3■□□□□ 0.04
CSNK1D-213ENST00000580446 OR6C75A6NL08 312 aa15.29■□□□□ 0.04
CSNK1D-213ENST00000580446 RPL9P32969 192 aaKnown RBP15.29■□□□□ 0.04
CSNK1D-213ENST00000580446 GRM5P41594 1212 aa15.29■□□□□ 0.04
CSNK1D-213ENST00000580446 IL12RB1P42701 662 aa15.29■□□□□ 0.04
CSNK1D-213ENST00000580446 CSRP3P50461 194 aa15.29■□□□□ 0.04
CSNK1D-213ENST00000580446 AKAP17AQ02040 695 aaKnown RBP15.29■□□□□ 0.04
CSNK1D-213ENST00000580446 DMP1Q13316 513 aaPredicted RBP15.29■□□□□ 0.04
CSNK1D-213ENST00000580446 BYSLQ13895 437 aaKnown RBP15.29■□□□□ 0.04
CSNK1D-213ENST00000580446 ARHGAP40Q5TG30 622 aa15.29■□□□□ 0.04
CSNK1D-213ENST00000580446 SPACA3Q8IXA5 215 aa15.29■□□□□ 0.04
CSNK1D-213ENST00000580446 YTHDC1Q96MU7 727 aaKnown RBP15.29■□□□□ 0.04
CSNK1D-213ENST00000580446 KIF2CQ99661 725 aa15.29■□□□□ 0.04
CSNK1D-213ENST00000580446 MIR1-1HGQ9H1L0 117 aa15.29■□□□□ 0.04
CSNK1D-213ENST00000580446 TOPORSQ9NS56 1045 aaPredicted RBP15.29■□□□□ 0.04
CSNK1D-213ENST00000580446 ANKEF1Q9NU02 776 aa15.29■□□□□ 0.04
CSNK1D-213ENST00000580446 KCNK4Q9NYG8 393 aa15.29■□□□□ 0.04
CSNK1D-213ENST00000580446 PCDHA4Q9UN74 947 aa15.29■□□□□ 0.04
CSNK1D-213ENST00000580446 BTBD18B2RXH4 712 aa15.28■□□□□ 0.04
CSNK1D-213ENST00000580446 M0QZQ0 153 aa15.28■□□□□ 0.04
CSNK1D-213ENST00000580446 PPEF2O14830 753 aa15.28■□□□□ 0.04
CSNK1D-213ENST00000580446 TADA3O75528 432 aa15.28■□□□□ 0.04
CSNK1D-213ENST00000580446 HMGA1P17096 107 aaKnown RBP15.28■□□□□ 0.04
CSNK1D-213ENST00000580446 ATP2B1P20020 1258 aa15.28■□□□□ 0.04
CSNK1D-213ENST00000580446 MRPS21P82921 87 aaKnown RBP15.28■□□□□ 0.04
CSNK1D-213ENST00000580446 SCRN1Q12765 414 aa15.28■□□□□ 0.04
CSNK1D-213ENST00000580446 USP4Q13107 963 aa15.28■□□□□ 0.04
CSNK1D-213ENST00000580446 ADCK5Q3MIX3 580 aa15.28■□□□□ 0.04
CSNK1D-213ENST00000580446 ZNF568Q3ZCX4 644 aa15.28■□□□□ 0.04
CSNK1D-213ENST00000580446 OVOS1Q6IE37 1185 aa15.28■□□□□ 0.04
CSNK1D-213ENST00000580446 DSTYKQ6XUX3 929 aa15.28■□□□□ 0.04
CSNK1D-213ENST00000580446 SLC36A4Q6YBV0 504 aa15.28■□□□□ 0.04
CSNK1D-213ENST00000580446 MON1AQ86VX9 555 aa15.28■□□□□ 0.04
CSNK1D-213ENST00000580446 SH3RF2Q8TEC5 729 aa15.28■□□□□ 0.04
CSNK1D-213ENST00000580446 FAM20AQ96MK3 541 aa15.28■□□□□ 0.04
CSNK1D-213ENST00000580446 C2orf40Q9H1Z8 148 aa15.28■□□□□ 0.04
CSNK1D-213ENST00000580446 GMIPQ9P107 970 aa15.28■□□□□ 0.04
CSNK1D-213ENST00000580446 IL17BQ9UHF5 180 aa15.28■□□□□ 0.04
CSNK1D-213ENST00000580446 DOPEY2Q9Y3R5 2298 aa15.27■□□□□ 0.04
CSNK1D-213ENST00000580446 M0R2N6 131 aa15.27■□□□□ 0.04
CSNK1D-213ENST00000580446 CCNT1O60563 726 aaKnown RBP15.27■□□□□ 0.04
CSNK1D-213ENST00000580446 CKMP06732 381 aa15.27■□□□□ 0.04
CSNK1D-213ENST00000580446 KCNE1P15382 129 aa15.27■□□□□ 0.04
CSNK1D-213ENST00000580446 NPY5RQ15761 445 aa15.27■□□□□ 0.04
CSNK1D-213ENST00000580446 HLA-BQ31612 363 aa15.27■□□□□ 0.04
CSNK1D-213ENST00000580446 EOGTQ5NDL2 527 aa15.27■□□□□ 0.04
CSNK1D-213ENST00000580446 MOXD1Q6UVY6 613 aa15.27■□□□□ 0.04
CSNK1D-213ENST00000580446 BLIDQ8IZY5 108 aa15.27■□□□□ 0.04
CSNK1D-213ENST00000580446 CCDC26Q8TAB7 109 aa15.27■□□□□ 0.04
CSNK1D-213ENST00000580446 SPATA18Q8TC71 538 aa15.27■□□□□ 0.04
CSNK1D-213ENST00000580446 BAP1Q92560 729 aa15.27■□□□□ 0.04
CSNK1D-213ENST00000580446 MRPS31Q92665 395 aaKnown RBP15.27■□□□□ 0.04
CSNK1D-213ENST00000580446 AIFM3Q96NN9 605 aa15.27■□□□□ 0.04
CSNK1D-213ENST00000580446 CDC6Q99741 560 aa15.27■□□□□ 0.04
CSNK1D-213ENST00000580446 NCOA5Q9HCD5 579 aaKnown RBP15.27■□□□□ 0.04
CSNK1D-213ENST00000580446 CNTN3Q9P232 1028 aa15.27■□□□□ 0.04
CSNK1D-213ENST00000580446 CBX4O00257 560 aa15.26■□□□□ 0.03
CSNK1D-213ENST00000580446 KCNK3O14649 394 aa15.26■□□□□ 0.03
CSNK1D-213ENST00000580446 KAT7O95251 611 aa15.26■□□□□ 0.03
CSNK1D-213ENST00000580446 CYP17A1P05093 508 aa15.26■□□□□ 0.03
CSNK1D-213ENST00000580446 KIR2DL1P43626 348 aaPredicted RBP15.26■□□□□ 0.03
CSNK1D-213ENST00000580446 NFKB2Q00653 900 aa15.26■□□□□ 0.03
CSNK1D-213ENST00000580446 FAM160A1Q05DH4 1040 aa15.26■□□□□ 0.03
CSNK1D-213ENST00000580446 KCNH2Q12809 1159 aa15.26■□□□□ 0.03
CSNK1D-213ENST00000580446 NR1H3Q13133 447 aa15.26■□□□□ 0.03
CSNK1D-213ENST00000580446 NECTIN1Q15223 517 aa15.26■□□□□ 0.03
CSNK1D-213ENST00000580446 ARMCX5Q6P1M9 558 aa15.26■□□□□ 0.03
CSNK1D-213ENST00000580446 HSD17B14Q9BPX1 270 aa15.26■□□□□ 0.03
CSNK1D-213ENST00000580446 ABI2Q9NYB9 513 aaPredicted RBP15.26■□□□□ 0.03
CSNK1D-213ENST00000580446 SRPK3Q9UPE1 567 aa15.26■□□□□ 0.03
CSNK1D-213ENST00000580446 ABCA12Q86UK0 2595 aa15.26■□□□□ 0.03
CSNK1D-213ENST00000580446 TRIP11Q15643 1979 aa15.25■□□□□ 0.03
CSNK1D-213ENST00000580446 NID2Q14112 1375 aa15.25■□□□□ 0.03
CSNK1D-213ENST00000580446 TRIM66O15016 1216 aa15.25■□□□□ 0.03
CSNK1D-213ENST00000580446 JUPP14923 745 aa15.25■□□□□ 0.03
CSNK1D-213ENST00000580446 GNSP15586 552 aa15.25■□□□□ 0.03
CSNK1D-213ENST00000580446 NDUFV2P19404 249 aa15.25■□□□□ 0.03
CSNK1D-213ENST00000580446 MATKP42679 507 aa15.25■□□□□ 0.03
CSNK1D-213ENST00000580446 IL9RQ01113 521 aa15.25■□□□□ 0.03
CSNK1D-213ENST00000580446 MYBPC2Q14324 1141 aa15.25■□□□□ 0.03
CSNK1D-213ENST00000580446 ZNF268Q14587 947 aaPredicted RBP15.25■□□□□ 0.03
CSNK1D-213ENST00000580446 NTRK3Q16288 839 aa15.25■□□□□ 0.03
CSNK1D-213ENST00000580446 PTPRNQ16849 979 aa15.25■□□□□ 0.03
CSNK1D-213ENST00000580446 PREPLQ4J6C6 727 aaPredicted RBP15.25■□□□□ 0.03
CSNK1D-213ENST00000580446 C6orf118Q5T5N4 469 aa15.25■□□□□ 0.03
CSNK1D-213ENST00000580446 USP49Q70CQ1 688 aa15.25■□□□□ 0.03
CSNK1D-213ENST00000580446 DHX32Q7L7V1 743 aaKnown RBP15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms