RNA–Protein interactions for RNA: ENST00000580222.5

LIMD2-209, Transcript of LIM domain containing 2, humanhuman

TSL 3

Gene LIMD2, Length 846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-209ENST00000580222 IFT74Q96LB3 600 aa20.9■□□□□ 0.94
LIMD2-209ENST00000580222 TIGD1Q96MW7 591 aa20.9■□□□□ 0.94
LIMD2-209ENST00000580222 TRIM9Q9C026 710 aa20.9■□□□□ 0.94
LIMD2-209ENST00000580222 MYH11P35749 1972 aa20.9■□□□□ 0.94
LIMD2-209ENST00000580222 CAPNS1P04632 268 aa20.89■□□□□ 0.93
LIMD2-209ENST00000580222 HARSP12081 509 aaKnown RBP20.89■□□□□ 0.93
LIMD2-209ENST00000580222 IDEP14735 1019 aa20.89■□□□□ 0.93
LIMD2-209ENST00000580222 BCKDHBP21953 392 aa20.89■□□□□ 0.93
LIMD2-209ENST00000580222 CASP1P29466 404 aa20.89■□□□□ 0.93
LIMD2-209ENST00000580222 UAP1L1Q3KQV9 507 aa20.89■□□□□ 0.93
LIMD2-209ENST00000580222 SOWAHCQ53LP3 525 aaPredicted RBP20.89■□□□□ 0.93
LIMD2-209ENST00000580222 RPLP0P6Q8NHW5 317 aa20.89■□□□□ 0.93
LIMD2-209ENST00000580222 C7orf25Q9BPX7 421 aa20.89■□□□□ 0.93
LIMD2-209ENST00000580222 HOOK1Q9UJC3 728 aaKnown RBP20.89■□□□□ 0.93
LIMD2-209ENST00000580222 SFI1A8K8P3 1242 aa20.88■□□□□ 0.93
LIMD2-209ENST00000580222 KHNYNO15037 678 aaKnown RBP20.88■□□□□ 0.93
LIMD2-209ENST00000580222 ZIC2O95409 532 aaPredicted RBP20.88■□□□□ 0.93
LIMD2-209ENST00000580222 MBD3O95983 291 aa20.88■□□□□ 0.93
LIMD2-209ENST00000580222 PRR29P0C7W0 189 aa20.88■□□□□ 0.93
LIMD2-209ENST00000580222 MCF2P10911 925 aa20.88■□□□□ 0.93
LIMD2-209ENST00000580222 PTMSP20962 102 aa20.88■□□□□ 0.93
LIMD2-209ENST00000580222 GBP1P32455 592 aa20.88■□□□□ 0.93
LIMD2-209ENST00000580222 NPTX2P47972 431 aa20.88■□□□□ 0.93
LIMD2-209ENST00000580222 GUCY2FP51841 1108 aa20.88■□□□□ 0.93
LIMD2-209ENST00000580222 PEX3P56589 373 aa20.88■□□□□ 0.93
LIMD2-209ENST00000580222 DMP1Q13316 513 aaPredicted RBP20.88■□□□□ 0.93
LIMD2-209ENST00000580222 CUL4BQ13620 913 aa20.88■□□□□ 0.93
LIMD2-209ENST00000580222 APBB1IPQ7Z5R6 666 aaPredicted RBP20.88■□□□□ 0.93
LIMD2-209ENST00000580222 DNAJC19Q96DA6 116 aa20.88■□□□□ 0.93
LIMD2-209ENST00000580222 C17orf75Q9HAS0 396 aa20.88■□□□□ 0.93
LIMD2-209ENST00000580222 PARVGQ9HBI0 331 aa20.88■□□□□ 0.93
LIMD2-209ENST00000580222 THG1LQ9NWX6 298 aaKnown RBP20.88■□□□□ 0.93
LIMD2-209ENST00000580222 LARSQ9P2J5 1176 aaKnown RBP20.88■□□□□ 0.93
LIMD2-209ENST00000580222 EBF1Q9UH73 591 aa20.88■□□□□ 0.93
LIMD2-209ENST00000580222 NEUROG3Q9Y4Z2 214 aa20.88■□□□□ 0.93
LIMD2-209ENST00000580222 ASB3Q9Y575 518 aa20.88■□□□□ 0.93
LIMD2-209ENST00000580222 CELSR3Q9NYQ7 3312 aa20.88■□□□□ 0.93
LIMD2-209ENST00000580222 SPAARA0A1B0GVQ0 90 aa20.87■□□□□ 0.93
LIMD2-209ENST00000580222 CCDC169A6NNP5 214 aa20.87■□□□□ 0.93
LIMD2-209ENST00000580222 APBB3O95704 486 aa20.87■□□□□ 0.93
LIMD2-209ENST00000580222 MYL1P05976 194 aa20.87■□□□□ 0.93
LIMD2-209ENST00000580222 PLS3P13797 630 aa20.87■□□□□ 0.93
LIMD2-209ENST00000580222 ATF6P18850 670 aa20.87■□□□□ 0.93
LIMD2-209ENST00000580222 AARSP49588 968 aaKnown RBP eCLIP20.87■□□□□ 0.93
LIMD2-209ENST00000580222 DMC1Q14565 340 aa20.87■□□□□ 0.93
LIMD2-209ENST00000580222 POSTNQ15063 836 aa20.87■□□□□ 0.93
LIMD2-209ENST00000580222 ARHGAP15Q53QZ3 475 aa20.87■□□□□ 0.93
LIMD2-209ENST00000580222 PMS2CLQ68D20 193 aa20.87■□□□□ 0.93
LIMD2-209ENST00000580222 SYT13Q7L8C5 426 aa20.87■□□□□ 0.93
LIMD2-209ENST00000580222 TMEM150AQ86TG1 271 aa20.87■□□□□ 0.93
LIMD2-209ENST00000580222 CCDC65Q8IXS2 484 aa20.87■□□□□ 0.93
LIMD2-209ENST00000580222 MYCT1Q8N699 235 aa20.87■□□□□ 0.93
LIMD2-209ENST00000580222 USP13Q92995 863 aaPredicted RBP20.87■□□□□ 0.93
LIMD2-209ENST00000580222 TCHPQ9BT92 498 aa20.87■□□□□ 0.93
LIMD2-209ENST00000580222 MRPL4Q9BYD3 311 aaKnown RBP20.87■□□□□ 0.93
LIMD2-209ENST00000580222 PANK4Q9NVE7 773 aa20.87■□□□□ 0.93
LIMD2-209ENST00000580222 MSRB2Q9Y3D2 182 aa20.87■□□□□ 0.93
LIMD2-209ENST00000580222 CACNA1EQ15878 2313 aa20.87■□□□□ 0.93
LIMD2-209ENST00000580222 ATG2BQ96BY7 2078 aa20.86■□□□□ 0.93
LIMD2-209ENST00000580222 OR6C75A6NL08 312 aa20.86■□□□□ 0.93
LIMD2-209ENST00000580222 PPEF2O14830 753 aa20.86■□□□□ 0.93
LIMD2-209ENST00000580222 GAP43P17677 238 aa20.86■□□□□ 0.93
LIMD2-209ENST00000580222 ZNF131P52739 623 aa20.86■□□□□ 0.93
LIMD2-209ENST00000580222 CNNM4Q6P4Q7 775 aa20.86■□□□□ 0.93
LIMD2-209ENST00000580222 C19orf48Q6RUI8 117 aa20.86■□□□□ 0.93
LIMD2-209ENST00000580222 SFR1Q86XK3 245 aa20.86■□□□□ 0.93
LIMD2-209ENST00000580222 CMTM8Q8IZV2 173 aa20.86■□□□□ 0.93
LIMD2-209ENST00000580222 GPT2Q8TD30 523 aa20.86■□□□□ 0.93
LIMD2-209ENST00000580222 TPSD1Q9BZJ3 242 aa20.86■□□□□ 0.93
LIMD2-209ENST00000580222 KMT5AQ9NQR1 393 aa20.86■□□□□ 0.93
LIMD2-209ENST00000580222 TBX20Q9UMR3 447 aa20.86■□□□□ 0.93
LIMD2-209ENST00000580222 KIF26AQ9ULI4 1882 aaPredicted RBP20.86■□□□□ 0.93
LIMD2-209ENST00000580222 NMT1P30419 496 aaKnown RBP20.85■□□□□ 0.93
LIMD2-209ENST00000580222 DGKEP52429 567 aa20.85■□□□□ 0.93
LIMD2-209ENST00000580222 ZBTB6Q15916 424 aa20.85■□□□□ 0.93
LIMD2-209ENST00000580222 MPZL3Q6UWV2 235 aa20.85■□□□□ 0.93
LIMD2-209ENST00000580222 UNC13DQ70J99 1090 aa20.85■□□□□ 0.93
LIMD2-209ENST00000580222 OR10T2Q8NGX3 314 aa20.85■□□□□ 0.93
LIMD2-209ENST00000580222 GIPC2Q8TF65 315 aa20.85■□□□□ 0.93
LIMD2-209ENST00000580222 P2RY13Q9BPV8 354 aa20.85■□□□□ 0.93
LIMD2-209ENST00000580222 HAPLN2Q9GZV7 340 aa20.85■□□□□ 0.93
LIMD2-209ENST00000580222 TMEM134Q9H6X4 195 aa20.85■□□□□ 0.93
LIMD2-209ENST00000580222 ARHGAP28Q9P2N2 729 aa20.85■□□□□ 0.93
LIMD2-209ENST00000580222 ABCA7Q8IZY2 2146 aa20.84■□□□□ 0.93
LIMD2-209ENST00000580222 PHLPP2Q6ZVD8 1323 aa20.84■□□□□ 0.93
LIMD2-209ENST00000580222 K7ENM7 598 aa20.84■□□□□ 0.93
LIMD2-209ENST00000580222 FGF19O95750 216 aa20.84■□□□□ 0.93
LIMD2-209ENST00000580222 DRD1P21728 446 aa20.84■□□□□ 0.93
LIMD2-209ENST00000580222 LRPAP1P30533 357 aa20.84■□□□□ 0.93
LIMD2-209ENST00000580222 GJA4P35212 333 aa20.84■□□□□ 0.93
LIMD2-209ENST00000580222 SMTNP53814 917 aa20.84■□□□□ 0.93
LIMD2-209ENST00000580222 DPYDQ12882 1025 aa20.84■□□□□ 0.93
LIMD2-209ENST00000580222 PNOCQ13519 176 aa20.84■□□□□ 0.93
LIMD2-209ENST00000580222 CCDC47Q96A33 483 aaKnown RBP20.84■□□□□ 0.93
LIMD2-209ENST00000580222 EXOC1Q9NV70 894 aa20.84■□□□□ 0.93
LIMD2-209ENST00000580222 SEL1LQ9UBV2 794 aa20.84■□□□□ 0.93
LIMD2-209ENST00000580222 KCNG1Q9UIX4 513 aa20.84■□□□□ 0.93
LIMD2-209ENST00000580222 ASH1LQ9NR48 2969 aaKnown RBP20.83■□□□□ 0.93
LIMD2-209ENST00000580222 FRMD3A2A2Y4 597 aa20.83■□□□□ 0.93
LIMD2-209ENST00000580222 SLC16A4O15374 487 aa20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms