RNA–Protein interactions for RNA: ENST00000578630.1

ERBB2-208, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 2

Gene ERBB2, Length 874 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-208ENST00000578630 TMEM176AQ96HP8 235 aa12.27□□□□□ -0.45
ERBB2-208ENST00000578630 RPGRIP1Q96KN7 1286 aa12.27□□□□□ -0.45
ERBB2-208ENST00000578630 CEP295NLQ96MC4 621 aa12.27□□□□□ -0.45
ERBB2-208ENST00000578630 CORO1BQ9BR76 489 aa12.27□□□□□ -0.45
ERBB2-208ENST00000578630 ELOVL4Q9GZR5 314 aa12.27□□□□□ -0.45
ERBB2-208ENST00000578630 VPS16Q9H269 839 aa12.27□□□□□ -0.45
ERBB2-208ENST00000578630 CRISPLD1Q9H336 500 aa12.27□□□□□ -0.45
ERBB2-208ENST00000578630 DPEP3Q9H4B8 488 aa12.27□□□□□ -0.45
ERBB2-208ENST00000578630 POMKQ9H5K3 350 aa12.27□□□□□ -0.45
ERBB2-208ENST00000578630 UBE2TQ9NPD8 197 aaPredicted RBP12.27□□□□□ -0.45
ERBB2-208ENST00000578630 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.27□□□□□ -0.45
ERBB2-208ENST00000578630 DNMT3BQ9UBC3 853 aaKnown RBP12.27□□□□□ -0.45
ERBB2-208ENST00000578630 KIAA1257Q9ULG3 409 aa12.27□□□□□ -0.45
ERBB2-208ENST00000578630 USTQ9Y2C2 406 aa12.27□□□□□ -0.45
ERBB2-208ENST00000578630 GOLGA6L19H0YKK7 550 aa12.26□□□□□ -0.45
ERBB2-208ENST00000578630 TRIM66O15016 1216 aa12.26□□□□□ -0.45
ERBB2-208ENST00000578630 FGF19O95750 216 aa12.26□□□□□ -0.45
ERBB2-208ENST00000578630 RHOP08100 348 aa12.26□□□□□ -0.45
ERBB2-208ENST00000578630 CSH1P0DML2 217 aa12.26□□□□□ -0.45
ERBB2-208ENST00000578630 CSH2P0DML3 217 aa12.26□□□□□ -0.45
ERBB2-208ENST00000578630 SLC9A1P19634 815 aa12.26□□□□□ -0.45
ERBB2-208ENST00000578630 FSHRP23945 695 aa12.26□□□□□ -0.45
ERBB2-208ENST00000578630 PON1P27169 355 aa12.26□□□□□ -0.45
ERBB2-208ENST00000578630 CDR1P51861 262 aa12.26□□□□□ -0.45
ERBB2-208ENST00000578630 MFAP3P55082 362 aa12.26□□□□□ -0.45
ERBB2-208ENST00000578630 KRT31Q15323 416 aa12.26□□□□□ -0.45
ERBB2-208ENST00000578630 FILIP1LQ4L180 1135 aa12.26□□□□□ -0.45
ERBB2-208ENST00000578630 ZNF394Q53GI3 561 aa12.26□□□□□ -0.45
ERBB2-208ENST00000578630 MIIPQ5JXC2 388 aa12.26□□□□□ -0.45
ERBB2-208ENST00000578630 PDZD4Q76G19 769 aaPredicted RBP12.26□□□□□ -0.45
ERBB2-208ENST00000578630 RRAGAQ7L523 313 aa12.26□□□□□ -0.45
ERBB2-208ENST00000578630 GIPC2Q8TF65 315 aa12.26□□□□□ -0.45
ERBB2-208ENST00000578630 PSMG2Q969U7 264 aa12.26□□□□□ -0.45
ERBB2-208ENST00000578630 CYFIP2Q96F07 1278 aa12.26□□□□□ -0.45
ERBB2-208ENST00000578630 B3GNT5Q9BYG0 378 aa12.26□□□□□ -0.45
ERBB2-208ENST00000578630 AVENQ9NQS1 362 aaPredicted RBP12.26□□□□□ -0.45
ERBB2-208ENST00000578630 ASAH2Q9NR71 780 aa12.26□□□□□ -0.45
ERBB2-208ENST00000578630 TAB2Q9NYJ8 693 aa12.26□□□□□ -0.45
ERBB2-208ENST00000578630 EHD2Q9NZN4 543 aa12.26□□□□□ -0.45
ERBB2-208ENST00000578630 CEP72Q9P209 647 aa12.26□□□□□ -0.45
ERBB2-208ENST00000578630 LIMA1Q9UHB6 759 aaKnown RBP12.26□□□□□ -0.45
ERBB2-208ENST00000578630 MRPS23Q9Y3D9 190 aaKnown RBP12.26□□□□□ -0.45
ERBB2-208ENST00000578630 NME7Q9Y5B8 376 aa12.26□□□□□ -0.45
ERBB2-208ENST00000578630 PCDHB4Q9Y5E5 795 aa12.26□□□□□ -0.45
ERBB2-208ENST00000578630 ZFP37Q9Y6Q3 630 aaPredicted RBP12.26□□□□□ -0.45
ERBB2-208ENST00000578630 PRUNE2Q8WUY3 3088 aa12.25□□□□□ -0.45
ERBB2-208ENST00000578630 SOAT2O75908 522 aa12.25□□□□□ -0.45
ERBB2-208ENST00000578630 MICAL2O94851 1124 aa12.25□□□□□ -0.45
ERBB2-208ENST00000578630 ZNF18P17022 549 aa12.25□□□□□ -0.45
ERBB2-208ENST00000578630 COPB1P53618 953 aaKnown RBP12.25□□□□□ -0.45
ERBB2-208ENST00000578630 DDR2Q16832 855 aa12.25□□□□□ -0.45
ERBB2-208ENST00000578630 SMYD5Q6GMV2 418 aa12.25□□□□□ -0.45
ERBB2-208ENST00000578630 PHLDB3Q6NSJ2 640 aa12.25□□□□□ -0.45
ERBB2-208ENST00000578630 TRIM65Q6PJ69 517 aa12.25□□□□□ -0.45
ERBB2-208ENST00000578630 DHX40Q8IX18 779 aaKnown RBP12.25□□□□□ -0.45
ERBB2-208ENST00000578630 TTC9BQ8N6N2 239 aa12.25□□□□□ -0.45
ERBB2-208ENST00000578630 ADAMTS19Q8TE59 1207 aa12.25□□□□□ -0.45
ERBB2-208ENST00000578630 WHAMMQ8TF30 809 aa12.25□□□□□ -0.45
ERBB2-208ENST00000578630 SMARCD1Q96GM5 515 aa12.25□□□□□ -0.45
ERBB2-208ENST00000578630 SPATA17Q96L03 361 aa12.25□□□□□ -0.45
ERBB2-208ENST00000578630 C8orf48Q96LL4 319 aa12.25□□□□□ -0.45
ERBB2-208ENST00000578630 HNRNPABQ99729 332 aaKnown RBP12.25□□□□□ -0.45
ERBB2-208ENST00000578630 UXTQ9UBK9 157 aaPredicted RBP12.25□□□□□ -0.45
ERBB2-208ENST00000578630 APEX2Q9UBZ4 518 aa12.25□□□□□ -0.45
ERBB2-208ENST00000578630 CDH22Q9UJ99 828 aa12.25□□□□□ -0.45
ERBB2-208ENST00000578630 CLUHO75153 1309 aa12.25□□□□□ -0.45
ERBB2-208ENST00000578630 CLDN5O00501 218 aa12.24□□□□□ -0.45
ERBB2-208ENST00000578630 PAEPP09466 180 aa12.24□□□□□ -0.45
ERBB2-208ENST00000578630 VDRP11473 427 aa12.24□□□□□ -0.45
ERBB2-208ENST00000578630 MYL4P12829 197 aa12.24□□□□□ -0.45
ERBB2-208ENST00000578630 GBP2P32456 591 aaPredicted RBP12.24□□□□□ -0.45
ERBB2-208ENST00000578630 SSTR3P32745 418 aaPredicted RBP12.24□□□□□ -0.45
ERBB2-208ENST00000578630 RAD23BP54727 409 aa12.24□□□□□ -0.45
ERBB2-208ENST00000578630 SLC8A3P57103 927 aa12.24□□□□□ -0.45
ERBB2-208ENST00000578630 NTHL1P78549 312 aa12.24□□□□□ -0.45
ERBB2-208ENST00000578630 ORC1Q13415 861 aa12.24□□□□□ -0.45
ERBB2-208ENST00000578630 IQCB1Q15051 598 aa12.24□□□□□ -0.45
ERBB2-208ENST00000578630 TMEM270Q6UE05 265 aa12.24□□□□□ -0.45
ERBB2-208ENST00000578630 GJD3Q8N144 294 aa12.24□□□□□ -0.45
ERBB2-208ENST00000578630 C12orf29Q8N999 325 aa12.24□□□□□ -0.45
ERBB2-208ENST00000578630 TDRD5Q8NAT2 981 aaKnown RBP12.24□□□□□ -0.45
ERBB2-208ENST00000578630 SLC4A11Q8NBS3 891 aa12.24□□□□□ -0.45
ERBB2-208ENST00000578630 SLC2A14Q8TDB8 520 aa12.24□□□□□ -0.45
ERBB2-208ENST00000578630 TWNKQ96RR1 684 aa12.24□□□□□ -0.45
ERBB2-208ENST00000578630 UHRF1Q96T88 793 aaPredicted RBP12.24□□□□□ -0.45
ERBB2-208ENST00000578630 ARID3AQ99856 593 aa12.24□□□□□ -0.45
ERBB2-208ENST00000578630 LPIN3Q9BQK8 851 aa12.24□□□□□ -0.45
ERBB2-208ENST00000578630 GPR88Q9GZN0 384 aa12.24□□□□□ -0.45
ERBB2-208ENST00000578630 TSPY26PQ9H489 355 aa12.24□□□□□ -0.45
ERBB2-208ENST00000578630 CBX8Q9HC52 389 aa12.24□□□□□ -0.45
ERBB2-208ENST00000578630 HCFC1R1Q9NWW0 138 aa12.24□□□□□ -0.45
ERBB2-208ENST00000578630 PLXNA3P51805 1871 aa12.23□□□□□ -0.45
ERBB2-208ENST00000578630 SLC38A8A6NNN8 435 aa12.23□□□□□ -0.45
ERBB2-208ENST00000578630 LOC730098B7Z3J9 87 aa12.23□□□□□ -0.45
ERBB2-208ENST00000578630 AP1G2O75843 785 aa12.23□□□□□ -0.45
ERBB2-208ENST00000578630 SERPINC1P01008 464 aa12.23□□□□□ -0.45
ERBB2-208ENST00000578630 KRT5P13647 590 aa12.23□□□□□ -0.45
ERBB2-208ENST00000578630 CD19P15391 556 aa12.23□□□□□ -0.45
ERBB2-208ENST00000578630 ATF6P18850 670 aa12.23□□□□□ -0.45
ERBB2-208ENST00000578630 EPHA5P54756 1037 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms