RNA–Protein interactions for RNA: ENST00000572369.5

SMG6-211, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-211ENST00000572369 SHC2P98077 582 aa8.32□□□□□ -1.08
SMG6-211ENST00000572369 SMARCB1Q12824 385 aa8.32□□□□□ -1.08
SMG6-211ENST00000572369 NFE2Q16621 373 aaPredicted RBP8.32□□□□□ -1.08
SMG6-211ENST00000572369 SOWAHAQ2M3V2 549 aa8.32□□□□□ -1.08
SMG6-211ENST00000572369 PABPC1LQ4VXU2 614 aaKnown RBP8.32□□□□□ -1.08
SMG6-211ENST00000572369 WDR44Q5JSH3 913 aa8.32□□□□□ -1.08
SMG6-211ENST00000572369 CYP4A22Q5TCH4 519 aa8.32□□□□□ -1.08
SMG6-211ENST00000572369 KRT39Q6A163 491 aa8.32□□□□□ -1.08
SMG6-211ENST00000572369 SV2AQ7L0J3 742 aa8.32□□□□□ -1.08
SMG6-211ENST00000572369 SPATA2LQ8IUW3 424 aaPredicted RBP8.32□□□□□ -1.08
SMG6-211ENST00000572369 GPR161Q8N6U8 529 aaKnown RBP8.32□□□□□ -1.08
SMG6-211ENST00000572369 ATAD1Q8NBU5 361 aa8.32□□□□□ -1.08
SMG6-211ENST00000572369 CXorf38Q8TB03 319 aa8.32□□□□□ -1.08
SMG6-211ENST00000572369 FEZF2Q8TBJ5 459 aa8.32□□□□□ -1.08
SMG6-211ENST00000572369 SPATA18Q8TC71 538 aa8.32□□□□□ -1.08
SMG6-211ENST00000572369 SPPL2BQ8TCT7 592 aa8.32□□□□□ -1.08
SMG6-211ENST00000572369 C2orf15Q8WU43 125 aaKnown RBP8.32□□□□□ -1.08
SMG6-211ENST00000572369 SYT15Q9BQS2 421 aa8.32□□□□□ -1.08
SMG6-211ENST00000572369 ACBD6Q9BR61 282 aa8.32□□□□□ -1.08
SMG6-211ENST00000572369 PI4K2AQ9BTU6 479 aa8.32□□□□□ -1.08
SMG6-211ENST00000572369 DNAI2Q9GZS0 605 aa8.32□□□□□ -1.08
SMG6-211ENST00000572369 GZF1Q9H116 711 aaPredicted RBP8.32□□□□□ -1.08
SMG6-211ENST00000572369 MFSD1Q9H3U5 465 aa8.32□□□□□ -1.08
SMG6-211ENST00000572369 METTL14Q9HCE5 456 aaKnown RBP8.32□□□□□ -1.08
SMG6-211ENST00000572369 TMEM8AQ9HCN3 771 aa8.32□□□□□ -1.08
SMG6-211ENST00000572369 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.32□□□□□ -1.08
SMG6-211ENST00000572369 HCFC1R1Q9NWW0 138 aa8.32□□□□□ -1.08
SMG6-211ENST00000572369 DNMT3BQ9UBC3 853 aaKnown RBP8.32□□□□□ -1.08
SMG6-211ENST00000572369 GTF3C4Q9UKN8 822 aa8.32□□□□□ -1.08
SMG6-211ENST00000572369 USTQ9Y2C2 406 aa8.32□□□□□ -1.08
SMG6-211ENST00000572369 MRPS23Q9Y3D9 190 aaKnown RBP8.32□□□□□ -1.08
SMG6-211ENST00000572369 YIPF1Q9Y548 306 aa8.32□□□□□ -1.08
SMG6-211ENST00000572369 PCDHB5Q9Y5E4 795 aa8.32□□□□□ -1.08
SMG6-211ENST00000572369 A8MXQ7 604 aa8.31□□□□□ -1.08
SMG6-211ENST00000572369 ZNF197O14709 1029 aa8.31□□□□□ -1.08
SMG6-211ENST00000572369 SOAT2O75908 522 aa8.31□□□□□ -1.08
SMG6-211ENST00000572369 VNN1O95497 513 aa8.31□□□□□ -1.08
SMG6-211ENST00000572369 STAU1O95793 577 aaKnown RBP8.31□□□□□ -1.08
SMG6-211ENST00000572369 MBD3O95983 291 aa8.31□□□□□ -1.08
SMG6-211ENST00000572369 RHOP08100 348 aa8.31□□□□□ -1.08
SMG6-211ENST00000572369 BMP6P22004 513 aa8.31□□□□□ -1.08
SMG6-211ENST00000572369 WARSP23381 471 aaKnown RBP8.31□□□□□ -1.08
SMG6-211ENST00000572369 MXI1P50539 228 aa8.31□□□□□ -1.08
SMG6-211ENST00000572369 PSMC1P62191 440 aaKnown RBP8.31□□□□□ -1.08
SMG6-211ENST00000572369 CLDN10P78369 228 aa8.31□□□□□ -1.08
SMG6-211ENST00000572369 CYP27A1Q02318 531 aa8.31□□□□□ -1.08
SMG6-211ENST00000572369 MAPRE1Q15691 268 aaKnown RBP8.31□□□□□ -1.08
SMG6-211ENST00000572369 ZACNQ401N2 412 aa8.31□□□□□ -1.08
SMG6-211ENST00000572369 INTS6LQ5JSJ4 861 aaKnown RBP8.31□□□□□ -1.08
SMG6-211ENST00000572369 ZC3H14Q6PJT7 736 aaKnown RBP8.31□□□□□ -1.08
SMG6-211ENST00000572369 C4orf50Q6ZRC1 276 aa8.31□□□□□ -1.08
SMG6-211ENST00000572369 PDZD4Q76G19 769 aaPredicted RBP8.31□□□□□ -1.08
SMG6-211ENST00000572369 FILIP1Q7Z7B0 1213 aa8.31□□□□□ -1.08
SMG6-211ENST00000572369 ITIH5Q86UX2 942 aa8.31□□□□□ -1.08
SMG6-211ENST00000572369 OSTM1Q86WC4 334 aa8.31□□□□□ -1.08
SMG6-211ENST00000572369 SCN4BQ8IWT1 228 aa8.31□□□□□ -1.08
SMG6-211ENST00000572369 UBALD2Q8IYN6 164 aa8.31□□□□□ -1.08
SMG6-211ENST00000572369 MLKLQ8NB16 471 aa8.31□□□□□ -1.08
SMG6-211ENST00000572369 ING5Q8WYH8 240 aa8.31□□□□□ -1.08
SMG6-211ENST00000572369 TAF4BQ92750 862 aa8.31□□□□□ -1.08
SMG6-211ENST00000572369 ELMO3Q96BJ8 720 aa8.31□□□□□ -1.08
SMG6-211ENST00000572369 CEP63Q96MT8 703 aa8.31□□□□□ -1.08
SMG6-211ENST00000572369 HNRNPABQ99729 332 aaKnown RBP8.31□□□□□ -1.08
SMG6-211ENST00000572369 RTP3Q9BQQ7 232 aa8.31□□□□□ -1.08
SMG6-211ENST00000572369 MRPL45Q9BRJ2 306 aaKnown RBP8.31□□□□□ -1.08
SMG6-211ENST00000572369 SRRTQ9BXP5 876 aaKnown RBP8.31□□□□□ -1.08
SMG6-211ENST00000572369 RHOBTB2Q9BYZ6 727 aa8.31□□□□□ -1.08
SMG6-211ENST00000572369 SLITRK6Q9H5Y7 841 aa8.31□□□□□ -1.08
SMG6-211ENST00000572369 ASAH2Q9NR71 780 aa8.31□□□□□ -1.08
SMG6-211ENST00000572369 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.31□□□□□ -1.08
SMG6-211ENST00000572369 LIMD1Q9UGP4 676 aa8.31□□□□□ -1.08
SMG6-211ENST00000572369 CDH9Q9ULB4 789 aa8.31□□□□□ -1.08
SMG6-211ENST00000572369 MYH10P35580 1976 aa8.31□□□□□ -1.08
SMG6-211ENST00000572369 IGSF10Q6WRI0 2623 aa8.31□□□□□ -1.08
SMG6-211ENST00000572369 IGF2RP11717 2491 aa8.3□□□□□ -1.08
SMG6-211ENST00000572369 GABRDO14764 452 aa8.3□□□□□ -1.08
SMG6-211ENST00000572369 HCRTO43612 131 aa8.3□□□□□ -1.08
SMG6-211ENST00000572369 ATP2C2O75185 946 aa8.3□□□□□ -1.08
SMG6-211ENST00000572369 TACC1O75410 805 aa8.3□□□□□ -1.08
SMG6-211ENST00000572369 GNA14O95837 355 aa8.3□□□□□ -1.08
SMG6-211ENST00000572369 POU2F2P09086 479 aa8.3□□□□□ -1.08
SMG6-211ENST00000572369 CCDC192P0DO97 292 aa8.3□□□□□ -1.08
SMG6-211ENST00000572369 HAPLN1P10915 354 aaPredicted RBP8.3□□□□□ -1.08
SMG6-211ENST00000572369 LMO2P25791 158 aa8.3□□□□□ -1.08
SMG6-211ENST00000572369 ANXA13P27216 316 aa8.3□□□□□ -1.08
SMG6-211ENST00000572369 GTF2H1P32780 548 aa8.3□□□□□ -1.08
SMG6-211ENST00000572369 GRIK1P39086 918 aa8.3□□□□□ -1.08
SMG6-211ENST00000572369 RAP1GAPP47736 663 aa8.3□□□□□ -1.08
SMG6-211ENST00000572369 CDH8P55286 799 aa8.3□□□□□ -1.08
SMG6-211ENST00000572369 RPL10AP62906 217 aaKnown RBP8.3□□□□□ -1.08
SMG6-211ENST00000572369 ENPEPQ07075 957 aa8.3□□□□□ -1.08
SMG6-211ENST00000572369 PPP3CAQ08209 521 aa8.3□□□□□ -1.08
SMG6-211ENST00000572369 CETN1Q12798 172 aa8.3□□□□□ -1.08
SMG6-211ENST00000572369 MTMR3Q13615 1198 aa8.3□□□□□ -1.08
SMG6-211ENST00000572369 SOWAHCQ53LP3 525 aaPredicted RBP8.3□□□□□ -1.08
SMG6-211ENST00000572369 MDH1BQ5I0G3 518 aa8.3□□□□□ -1.08
SMG6-211ENST00000572369 C1orf220Q5T0J3 134 aa8.3□□□□□ -1.08
SMG6-211ENST00000572369 CWF19L1Q69YN2 538 aaKnown RBP8.3□□□□□ -1.08
SMG6-211ENST00000572369 SPOPLQ6IQ16 392 aa8.3□□□□□ -1.08
SMG6-211ENST00000572369 TTI2Q6NXR4 508 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms