RNA–Protein interactions for RNA: ENST00000572019.1

NUP88-203, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-203ENST00000572019 POLR2BP30876 1174 aaKnown RBP20.64■□□□□ 0.89
NUP88-203ENST00000572019 PI4KAP42356 2102 aa20.64■□□□□ 0.89
NUP88-203ENST00000572019 ZXDBP98169 803 aa20.64■□□□□ 0.89
NUP88-203ENST00000572019 USP4Q13107 963 aa20.64■□□□□ 0.89
NUP88-203ENST00000572019 EML3Q32P44 896 aa20.64■□□□□ 0.89
NUP88-203ENST00000572019 CC2D1AQ6P1N0 951 aaPredicted RBP20.64■□□□□ 0.89
NUP88-203ENST00000572019 USP49Q70CQ1 688 aa20.64■□□□□ 0.89
NUP88-203ENST00000572019 SYT13Q7L8C5 426 aa20.64■□□□□ 0.89
NUP88-203ENST00000572019 SFR1Q86XK3 245 aa20.64■□□□□ 0.89
NUP88-203ENST00000572019 DCP1BQ8IZD4 617 aaKnown RBP20.64■□□□□ 0.89
NUP88-203ENST00000572019 MRPS31Q92665 395 aaKnown RBP20.64■□□□□ 0.89
NUP88-203ENST00000572019 EDEM2Q9BV94 578 aa20.64■□□□□ 0.89
NUP88-203ENST00000572019 LINC00597Q9H2U6 94 aa20.64■□□□□ 0.89
NUP88-203ENST00000572019 MYO18AQ92614 2054 aaKnown RBP20.64■□□□□ 0.89
NUP88-203ENST00000572019 FAM208BQ5VWN6 2430 aa20.63■□□□□ 0.89
NUP88-203ENST00000572019 LNP1A1A4G5 178 aa20.63■□□□□ 0.89
NUP88-203ENST00000572019 BCLAF3A2AJT9 711 aaKnown RBP20.63■□□□□ 0.89
NUP88-203ENST00000572019 C2orf78A6NCI8 922 aa20.63■□□□□ 0.89
NUP88-203ENST00000572019 PATE3B3GLJ2 98 aa20.63■□□□□ 0.89
NUP88-203ENST00000572019 TULP1O00294 542 aaPredicted RBP20.63■□□□□ 0.89
NUP88-203ENST00000572019 TBCAO75347 108 aaKnown RBP20.63■□□□□ 0.89
NUP88-203ENST00000572019 PPP1R37O75864 691 aa20.63■□□□□ 0.89
NUP88-203ENST00000572019 CSH1P0DML2 217 aa20.63■□□□□ 0.89
NUP88-203ENST00000572019 CSH2P0DML3 217 aa20.63■□□□□ 0.89
NUP88-203ENST00000572019 BCKDHBP21953 392 aa20.63■□□□□ 0.89
NUP88-203ENST00000572019 UBA7P41226 1012 aa20.63■□□□□ 0.89
NUP88-203ENST00000572019 SMARCB1Q12824 385 aa20.63■□□□□ 0.89
NUP88-203ENST00000572019 PSMD2Q13200 908 aa20.63■□□□□ 0.89
NUP88-203ENST00000572019 ZNF268Q14587 947 aaPredicted RBP20.63■□□□□ 0.89
NUP88-203ENST00000572019 PDGFRLQ15198 375 aa20.63■□□□□ 0.89
NUP88-203ENST00000572019 GAB4Q2WGN9 574 aa20.63■□□□□ 0.89
NUP88-203ENST00000572019 SV2CQ496J9 727 aa20.63■□□□□ 0.89
NUP88-203ENST00000572019 SFTPA1Q8IWL2 248 aa20.63■□□□□ 0.89
NUP88-203ENST00000572019 ARL14EPQ8N8R7 260 aaPredicted RBP20.63■□□□□ 0.89
NUP88-203ENST00000572019 C1orf127Q8N9H9 656 aa20.63■□□□□ 0.89
NUP88-203ENST00000572019 OSCP1Q8WVF1 389 aa20.63■□□□□ 0.89
NUP88-203ENST00000572019 CD101Q93033 1021 aa20.63■□□□□ 0.89
NUP88-203ENST00000572019 SAAL1Q96ER3 474 aa20.63■□□□□ 0.89
NUP88-203ENST00000572019 CALML4Q96GE6 196 aa20.63■□□□□ 0.89
NUP88-203ENST00000572019 AK8Q96MA6 479 aa20.63■□□□□ 0.89
NUP88-203ENST00000572019 TPSD1Q9BZJ3 242 aa20.63■□□□□ 0.89
NUP88-203ENST00000572019 DUS2Q9NX74 493 aaKnown RBP20.63■□□□□ 0.89
NUP88-203ENST00000572019 DDX43Q9NXZ2 648 aaKnown RBP20.63■□□□□ 0.89
NUP88-203ENST00000572019 PPP4R2Q9NY27 417 aa20.63■□□□□ 0.89
NUP88-203ENST00000572019 GCNT4Q9P109 453 aa20.63■□□□□ 0.89
NUP88-203ENST00000572019 GTF3C4Q9UKN8 822 aa20.63■□□□□ 0.89
NUP88-203ENST00000572019 ASPMQ8IZT6 3477 aa20.62■□□□□ 0.89
NUP88-203ENST00000572019 APBB3O95704 486 aa20.62■□□□□ 0.89
NUP88-203ENST00000572019 CAVIN2O95810 425 aa20.62■□□□□ 0.89
NUP88-203ENST00000572019 ITGB3P05106 788 aa20.62■□□□□ 0.89
NUP88-203ENST00000572019 HNRNPLP14866 589 aaKnown RBP eCLIP20.62■□□□□ 0.89
NUP88-203ENST00000572019 GJB2P29033 226 aa20.62■□□□□ 0.89
NUP88-203ENST00000572019 NOVA1P51513 510 aaKnown RBP20.62■□□□□ 0.89
NUP88-203ENST00000572019 TFAMQ00059 246 aaKnown RBP20.62■□□□□ 0.89
NUP88-203ENST00000572019 FAM160A1Q05DH4 1040 aa20.62■□□□□ 0.89
NUP88-203ENST00000572019 INTS6LQ5JSJ4 861 aaKnown RBP20.62■□□□□ 0.89
NUP88-203ENST00000572019 DYMQ7RTS9 669 aa20.62■□□□□ 0.89
NUP88-203ENST00000572019 ZNF720Q7Z2F6 126 aa20.62■□□□□ 0.89
NUP88-203ENST00000572019 CPA6Q8N4T0 437 aa20.62■□□□□ 0.89
NUP88-203ENST00000572019 LEO1Q8WVC0 666 aaPredicted RBP20.62■□□□□ 0.89
NUP88-203ENST00000572019 POMGNT1Q8WZA1 660 aa20.62■□□□□ 0.89
NUP88-203ENST00000572019 STRA6Q9BX79 667 aa20.62■□□□□ 0.89
NUP88-203ENST00000572019 ST6GALNAC4Q9H4F1 302 aa20.62■□□□□ 0.89
NUP88-203ENST00000572019 EBF1Q9UH73 591 aa20.62■□□□□ 0.89
NUP88-203ENST00000572019 ZMYM5Q9UJ78 669 aa20.62■□□□□ 0.89
NUP88-203ENST00000572019 AGAP1Q9UPQ3 857 aa20.62■□□□□ 0.89
NUP88-203ENST00000572019 WASF3Q9UPY6 502 aa20.62■□□□□ 0.89
NUP88-203ENST00000572019 ADAMTS9Q9P2N4 1935 aa20.62■□□□□ 0.89
NUP88-203ENST00000572019 AKAP13Q12802 2813 aa20.62■□□□□ 0.89
NUP88-203ENST00000572019 ZZEF1O43149 2961 aa20.61■□□□□ 0.89
NUP88-203ENST00000572019 ATP2C2O75185 946 aa20.61■□□□□ 0.89
NUP88-203ENST00000572019 TSPY1Q01534 308 aa20.61■□□□□ 0.89
NUP88-203ENST00000572019 MESP2Q0VG99 397 aa20.61■□□□□ 0.89
NUP88-203ENST00000572019 SLFN12LQ6IEE8 588 aa20.61■□□□□ 0.89
NUP88-203ENST00000572019 LARP4BQ92615 738 aaKnown RBP20.61■□□□□ 0.89
NUP88-203ENST00000572019 MYRFLQ96LU7 910 aa20.61■□□□□ 0.89
NUP88-203ENST00000572019 FAM213AQ9BRX8 229 aa20.61■□□□□ 0.89
NUP88-203ENST00000572019 FGFBP2Q9BYJ0 223 aa20.61■□□□□ 0.89
NUP88-203ENST00000572019 TBC1D7Q9P0N9 293 aa20.61■□□□□ 0.89
NUP88-203ENST00000572019 SIX4Q9UIU6 781 aa20.61■□□□□ 0.89
NUP88-203ENST00000572019 SPEGQ15772 3267 aa20.61■□□□□ 0.89
NUP88-203ENST00000572019 CEP192Q8TEP8 1941 aa20.61■□□□□ 0.89
NUP88-203ENST00000572019 CACNA1EQ15878 2313 aa20.6■□□□□ 0.89
NUP88-203ENST00000572019 SLC26A4O43511 780 aa20.6■□□□□ 0.89
NUP88-203ENST00000572019 PROS1P07225 676 aa20.6■□□□□ 0.89
NUP88-203ENST00000572019 SCP2P22307 547 aa20.6■□□□□ 0.89
NUP88-203ENST00000572019 GBP1P32455 592 aa20.6■□□□□ 0.89
NUP88-203ENST00000572019 OPRD1P41143 372 aa20.6■□□□□ 0.89
NUP88-203ENST00000572019 CASP5P51878 434 aa20.6■□□□□ 0.89
NUP88-203ENST00000572019 DGKEP52429 567 aa20.6■□□□□ 0.89
NUP88-203ENST00000572019 SEC13P55735 322 aa20.6■□□□□ 0.89
NUP88-203ENST00000572019 ELF2Q15723 593 aa20.6■□□□□ 0.89
NUP88-203ENST00000572019 NFE2Q16621 373 aaPredicted RBP20.6■□□□□ 0.89
NUP88-203ENST00000572019 FBXO43Q4G163 708 aa20.6■□□□□ 0.89
NUP88-203ENST00000572019 SH3RF2Q8TEC5 729 aa20.6■□□□□ 0.89
NUP88-203ENST00000572019 TRMT2BQ96GJ1 504 aaKnown RBP20.6■□□□□ 0.89
NUP88-203ENST00000572019 EPSTI1Q96J88 318 aa20.6■□□□□ 0.89
NUP88-203ENST00000572019 TMX3Q96JJ7 454 aa20.6■□□□□ 0.89
NUP88-203ENST00000572019 ZNF560Q96MR9 790 aa20.6■□□□□ 0.89
NUP88-203ENST00000572019 ACBD6Q9BR61 282 aa20.6■□□□□ 0.89
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