RNA–Protein interactions for RNA: ENST00000571643.5

CDC27-213, Transcript of cell division cycle 27, human

TSL 3

Gene CDC27, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDC27-213	ENST00000571643	SMO	Q99835	787 aa		4.41	□□□□□ -1.7
CDC27-213	ENST00000571643	LRFN3	Q9BTN0	628 aa		4.41	□□□□□ -1.7
CDC27-213	ENST00000571643	PRDM13	Q9H4Q3	707 aa		4.41	□□□□□ -1.7
CDC27-213	ENST00000571643	CFAP97	Q9P2B7	532 aa		4.41	□□□□□ -1.7
CDC27-213	ENST00000571643	LAS1L	Q9Y4W2	734 aa	Known RBP	4.41	□□□□□ -1.7
CDC27-213	ENST00000571643	TNFRSF18	Q9Y5U5	241 aa		4.41	□□□□□ -1.7
CDC27-213	ENST00000571643	C1orf167	Q5SNV9	1468 aa		4.41	□□□□□ -1.7
CDC27-213	ENST00000571643	KAT6A	Q92794	2004 aa		4.41	□□□□□ -1.7
CDC27-213	ENST00000571643	KIF1A	Q12756	1690 aa		4.41	□□□□□ -1.7
CDC27-213	ENST00000571643	NPHP3	Q7Z494	1330 aa		4.41	□□□□□ -1.7
CDC27-213	ENST00000571643	ASXL1	Q8IXJ9	1541 aa		4.41	□□□□□ -1.7
CDC27-213	ENST00000571643	FMN2	Q9NZ56	1722 aa		4.41	□□□□□ -1.7
CDC27-213	ENST00000571643	BRD4	O60885	1362 aa	Predicted RBP	4.4	□□□□□ -1.7
CDC27-213	ENST00000571643	JCAD	Q9P266	1359 aa		4.4	□□□□□ -1.7
CDC27-213	ENST00000571643	NHSL1	Q5SYE7	1610 aa		4.4	□□□□□ -1.7
CDC27-213	ENST00000571643	TRPM1	Q7Z4N2	1603 aa		4.4	□□□□□ -1.7
CDC27-213	ENST00000571643	SLC16A6	O15403	523 aa		4.4	□□□□□ -1.71
CDC27-213	ENST00000571643	ZFPL1	O95159	310 aa		4.4	□□□□□ -1.71
CDC27-213	ENST00000571643	IGLV2-14	P01704	120 aa		4.4	□□□□□ -1.71
CDC27-213	ENST00000571643	CCND1	P24385	295 aa		4.4	□□□□□ -1.71
CDC27-213	ENST00000571643	SLC6A4	P31645	630 aa		4.4	□□□□□ -1.71
CDC27-213	ENST00000571643	HSPA1L	P34931	641 aa		4.4	□□□□□ -1.71
CDC27-213	ENST00000571643	FXR1	P51114	621 aa	Known RBP eCLIP	4.4	□□□□□ -1.71
CDC27-213	ENST00000571643	NXPH1	P58417	271 aa		4.4	□□□□□ -1.71
CDC27-213	ENST00000571643	ITIH3	Q06033	890 aa		4.4	□□□□□ -1.71
CDC27-213	ENST00000571643	DYRK1A	Q13627	763 aa		4.4	□□□□□ -1.71
CDC27-213	ENST00000571643	PTPRR	Q15256	657 aa		4.4	□□□□□ -1.71
CDC27-213	ENST00000571643	UAP1L1	Q3KQV9	507 aa		4.4	□□□□□ -1.71
CDC27-213	ENST00000571643	C3orf36	Q3SXR2	165 aa		4.4	□□□□□ -1.71
CDC27-213	ENST00000571643	BRINP3	Q76B58	766 aa		4.4	□□□□□ -1.71
CDC27-213	ENST00000571643	CCAR1	Q8IX12	1150 aa	Known RBP	4.4	□□□□□ -1.71
CDC27-213	ENST00000571643	SCAMP4	Q969E2	229 aa		4.4	□□□□□ -1.71
CDC27-213	ENST00000571643	FBXL20	Q96IG2	436 aa		4.4	□□□□□ -1.71
CDC27-213	ENST00000571643	KLHL32	Q96NJ5	620 aa		4.4	□□□□□ -1.71
CDC27-213	ENST00000571643	PRAM1	Q96QH2	718 aa		4.4	□□□□□ -1.71
CDC27-213	ENST00000571643	TLR10	Q9BXR5	811 aa		4.4	□□□□□ -1.71
CDC27-213	ENST00000571643	ALG13	Q9NP73	1137 aa	Known RBP	4.4	□□□□□ -1.71
CDC27-213	ENST00000571643	STK26	Q9P289	416 aa		4.4	□□□□□ -1.71
CDC27-213	ENST00000571643	CTTNBP2NL	Q9P2B4	639 aa		4.4	□□□□□ -1.71
CDC27-213	ENST00000571643	LIMCH1	Q9UPQ0	1083 aa		4.4	□□□□□ -1.71
CDC27-213	ENST00000571643	NOP58	Q9Y2X3	529 aa	Known RBP	4.4	□□□□□ -1.71
CDC27-213	ENST00000571643	ENTPD2	Q9Y5L3	495 aa		4.4	□□□□□ -1.71
CDC27-213	ENST00000571643	ARHGEF17	Q96PE2	2063 aa	Predicted RBP	4.4	□□□□□ -1.71
CDC27-213	ENST00000571643	PHLPP1	O60346	1717 aa		4.4	□□□□□ -1.71
CDC27-213	ENST00000571643	SHPRH	Q149N8	1683 aa		4.39	□□□□□ -1.71
CDC27-213	ENST00000571643	COL11A2	P13942	1736 aa	Predicted RBP	4.39	□□□□□ -1.71
CDC27-213	ENST00000571643	ITSN1	Q15811	1721 aa		4.39	□□□□□ -1.71
CDC27-213	ENST00000571643	ARHGEF28	Q8N1W1	1705 aa	Known RBP	4.39	□□□□□ -1.71
CDC27-213	ENST00000571643	CCDC194	A0A1B0GVG4	234 aa		4.39	□□□□□ -1.71
CDC27-213	ENST00000571643	GCOM1	H8Y6P7	765 aa	Predicted RBP	4.39	□□□□□ -1.71
CDC27-213	ENST00000571643	FZD9	O00144	591 aa		4.39	□□□□□ -1.71
CDC27-213	ENST00000571643	PCDHGA12	O60330	932 aa		4.39	□□□□□ -1.71
CDC27-213	ENST00000571643	PEX14	O75381	377 aa		4.39	□□□□□ -1.71
CDC27-213	ENST00000571643	WT1	P19544	449 aa	Predicted RBP	4.39	□□□□□ -1.71
CDC27-213	ENST00000571643	GRIA3	P42263	894 aa		4.39	□□□□□ -1.71
CDC27-213	ENST00000571643	CDKN1C	P49918	316 aa	Predicted RBP	4.39	□□□□□ -1.71
CDC27-213	ENST00000571643	ZNF280A	P59817	542 aa	Predicted RBP	4.39	□□□□□ -1.71
CDC27-213	ENST00000571643	IL10RA	Q13651	578 aa		4.39	□□□□□ -1.71
CDC27-213	ENST00000571643	PTPN21	Q16825	1174 aa		4.39	□□□□□ -1.71
CDC27-213	ENST00000571643	CCDC93	Q567U6	631 aa		4.39	□□□□□ -1.71
CDC27-213	ENST00000571643	KAZN	Q674X7	775 aa		4.39	□□□□□ -1.71
CDC27-213	ENST00000571643	TAPT1	Q6NXT6	567 aa		4.39	□□□□□ -1.71
CDC27-213	ENST00000571643	SLC4A10	Q6U841	1118 aa		4.39	□□□□□ -1.71
CDC27-213	ENST00000571643	PTF1A	Q7RTS3	328 aa		4.39	□□□□□ -1.71
CDC27-213	ENST00000571643	ADGRG5	Q8IZF4	528 aa		4.39	□□□□□ -1.71
CDC27-213	ENST00000571643	CFAP52	Q8N1V2	620 aa		4.39	□□□□□ -1.71
CDC27-213	ENST00000571643	PRPF38A	Q8NAV1	312 aa	Known RBP	4.39	□□□□□ -1.71
CDC27-213	ENST00000571643	B3GALNT2	Q8NCR0	500 aa		4.39	□□□□□ -1.71
CDC27-213	ENST00000571643	NTN5	Q8WTR8	489 aa	Predicted RBP	4.39	□□□□□ -1.71
CDC27-213	ENST00000571643	RAB24	Q969Q5	203 aa		4.39	□□□□□ -1.71
CDC27-213	ENST00000571643	GPATCH3	Q96I76	525 aa		4.39	□□□□□ -1.71
CDC27-213	ENST00000571643	CCDC136	Q96JN2	1154 aa		4.39	□□□□□ -1.71
CDC27-213	ENST00000571643	SIN3A	Q96ST3	1273 aa		4.39	□□□□□ -1.71
CDC27-213	ENST00000571643	TIMP4	Q99727	224 aa		4.39	□□□□□ -1.71
CDC27-213	ENST00000571643	CNPPD1	Q9BV87	410 aa		4.39	□□□□□ -1.71
CDC27-213	ENST00000571643	PCGF6	Q9BYE7	350 aa		4.39	□□□□□ -1.71
CDC27-213	ENST00000571643	IMPG2	Q9BZV3	1241 aa		4.39	□□□□□ -1.71
CDC27-213	ENST00000571643	WDCP	Q9H6R7	721 aa		4.39	□□□□□ -1.71
CDC27-213	ENST00000571643	BRD9	Q9H8M2	597 aa		4.39	□□□□□ -1.71
CDC27-213	ENST00000571643	KLHL42	Q9P2K6	505 aa		4.39	□□□□□ -1.71
CDC27-213	ENST00000571643	PCDHGA9	Q9Y5G4	932 aa	Known RBP	4.39	□□□□□ -1.71
CDC27-213	ENST00000571643	PCDHGA8	Q9Y5G5	932 aa		4.39	□□□□□ -1.71
CDC27-213	ENST00000571643	PCDHGA7	Q9Y5G6	932 aa		4.39	□□□□□ -1.71
CDC27-213	ENST00000571643	PCDHGA6	Q9Y5G7	932 aa		4.39	□□□□□ -1.71
CDC27-213	ENST00000571643	PCDHGA3	Q9Y5H0	932 aa		4.39	□□□□□ -1.71
CDC27-213	ENST00000571643	SPATA31A3	Q5VYP0	1347 aa		4.39	□□□□□ -1.71
CDC27-213	ENST00000571643	CENPJ	Q9HC77	1338 aa	Predicted RBP	4.39	□□□□□ -1.71
CDC27-213	ENST00000571643	COL16A1	Q07092	1604 aa	Predicted RBP	4.39	□□□□□ -1.71
CDC27-213	ENST00000571643	RALGAPB	Q86X10	1494 aa		4.38	□□□□□ -1.71
CDC27-213	ENST00000571643	TULP4	Q9NRJ4	1543 aa		4.38	□□□□□ -1.71
CDC27-213	ENST00000571643	CREB3	O43889	395 aa		4.38	□□□□□ -1.71
CDC27-213	ENST00000571643	KATNA1	O75449	491 aa		4.38	□□□□□ -1.71
CDC27-213	ENST00000571643	SUN1	O94901	812 aa		4.38	□□□□□ -1.71
CDC27-213	ENST00000571643	PARN	O95453	639 aa	Known RBP	4.38	□□□□□ -1.71
CDC27-213	ENST00000571643	MAP4K4	O95819	1239 aa	Predicted RBP	4.38	□□□□□ -1.71
CDC27-213	ENST00000571643	SBK3	P0C264	359 aa		4.38	□□□□□ -1.71
CDC27-213	ENST00000571643	MAL	P21145	153 aa		4.38	□□□□□ -1.71
CDC27-213	ENST00000571643	EDNRB	P24530	442 aa		4.38	□□□□□ -1.71
CDC27-213	ENST00000571643	SMARCA1	P28370	1054 aa		4.38	□□□□□ -1.71
CDC27-213	ENST00000571643	RECQL	P46063	649 aa	Predicted RBP	4.38	□□□□□ -1.71

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