RNA–Protein interactions for RNA: ENST00000571249.1

CHD3-213, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-213ENST00000571249 CALM1P0DP23 149 aa7.59□□□□□ -1.19
CHD3-213ENST00000571249 CALM2P0DP24 149 aa7.59□□□□□ -1.19
CHD3-213ENST00000571249 CALM3P0DP25 149 aa7.59□□□□□ -1.19
CHD3-213ENST00000571249 GNSP15586 552 aa7.59□□□□□ -1.19
CHD3-213ENST00000571249 ARF4P18085 180 aaPredicted RBP7.59□□□□□ -1.19
CHD3-213ENST00000571249 GNAQP50148 359 aa7.59□□□□□ -1.19
CHD3-213ENST00000571249 USP11P51784 963 aa7.59□□□□□ -1.19
CHD3-213ENST00000571249 ADCY7P51828 1080 aa7.59□□□□□ -1.19
CHD3-213ENST00000571249 JAK3P52333 1124 aa7.59□□□□□ -1.19
CHD3-213ENST00000571249 NAPAP54920 295 aa7.59□□□□□ -1.19
CHD3-213ENST00000571249 SETQ01105 290 aaPredicted RBP7.59□□□□□ -1.19
CHD3-213ENST00000571249 PTH1RQ03431 593 aa7.59□□□□□ -1.19
CHD3-213ENST00000571249 TRDNQ13061 729 aa7.59□□□□□ -1.19
CHD3-213ENST00000571249 AP3B2Q13367 1082 aa7.59□□□□□ -1.19
CHD3-213ENST00000571249 SF3A1Q15459 793 aaKnown RBP7.59□□□□□ -1.19
CHD3-213ENST00000571249 PRR16Q569H4 304 aa7.59□□□□□ -1.19
CHD3-213ENST00000571249 JAKMIP3Q5VZ66 844 aa7.59□□□□□ -1.19
CHD3-213ENST00000571249 TPGS2Q68CL5 300 aa7.59□□□□□ -1.19
CHD3-213ENST00000571249 PLA2G4FQ68DD2 849 aa7.59□□□□□ -1.19
CHD3-213ENST00000571249 WWC2Q6AWC2 1192 aa7.59□□□□□ -1.19
CHD3-213ENST00000571249 FBXL19Q6PCT2 694 aa7.59□□□□□ -1.19
CHD3-213ENST00000571249 SLC36A4Q6YBV0 504 aa7.59□□□□□ -1.19
CHD3-213ENST00000571249 RNF19BQ6ZMZ0 732 aa7.59□□□□□ -1.19
CHD3-213ENST00000571249 PTRH1Q86Y79 214 aaKnown RBP7.59□□□□□ -1.19
CHD3-213ENST00000571249 C3orf58Q8NDZ4 430 aa7.59□□□□□ -1.19
CHD3-213ENST00000571249 PSPC1Q8WXF1 523 aaKnown RBP7.59□□□□□ -1.19
CHD3-213ENST00000571249 SPATA32Q96LK8 384 aa7.59□□□□□ -1.19
CHD3-213ENST00000571249 MAP3K14Q99558 947 aa7.59□□□□□ -1.19
CHD3-213ENST00000571249 CRISPLD1Q9H336 500 aa7.59□□□□□ -1.19
CHD3-213ENST00000571249 UNC45AQ9H3U1 944 aa7.59□□□□□ -1.19
CHD3-213ENST00000571249 TMEM134Q9H6X4 195 aa7.59□□□□□ -1.19
CHD3-213ENST00000571249 GPRC5CQ9NQ84 441 aa7.59□□□□□ -1.19
CHD3-213ENST00000571249 CALCOCO1Q9P1Z2 691 aa7.59□□□□□ -1.19
CHD3-213ENST00000571249 AFF4Q9UHB7 1163 aaKnown RBP7.59□□□□□ -1.19
CHD3-213ENST00000571249 FBXL5Q9UKA1 691 aa7.59□□□□□ -1.19
CHD3-213ENST00000571249 CYP8B1Q9UNU6 501 aa7.59□□□□□ -1.19
CHD3-213ENST00000571249 YIPF1Q9Y548 306 aa7.59□□□□□ -1.19
CHD3-213ENST00000571249 PCDHGB2Q9Y5G2 931 aa7.59□□□□□ -1.19
CHD3-213ENST00000571249 AKAP9Q99996 3911 aa7.59□□□□□ -1.19
CHD3-213ENST00000571249 HIVEP3Q5T1R4 2406 aa7.59□□□□□ -1.19
CHD3-213ENST00000571249 PLXND1Q9Y4D7 1925 aa7.58□□□□□ -1.2
CHD3-213ENST00000571249 TMEM189-UBE2V1I3L0A0 370 aa7.58□□□□□ -1.2
CHD3-213ENST00000571249 INO80B-WBP1J3KQ70 363 aa7.58□□□□□ -1.2
CHD3-213ENST00000571249 EFSO43281 561 aa7.58□□□□□ -1.2
CHD3-213ENST00000571249 B4GALT5O43286 388 aa7.58□□□□□ -1.2
CHD3-213ENST00000571249 CER1O95813 267 aa7.58□□□□□ -1.2
CHD3-213ENST00000571249 MPOP05164 745 aa7.58□□□□□ -1.2
CHD3-213ENST00000571249 GABRG2P18507 467 aa7.58□□□□□ -1.2
CHD3-213ENST00000571249 GABRR2P28476 465 aa7.58□□□□□ -1.2
CHD3-213ENST00000571249 WEE1P30291 646 aa7.58□□□□□ -1.2
CHD3-213ENST00000571249 SFNP31947 248 aa7.58□□□□□ -1.2
CHD3-213ENST00000571249 DCTP40126 519 aa7.58□□□□□ -1.2
CHD3-213ENST00000571249 GCGRP47871 477 aa7.58□□□□□ -1.2
CHD3-213ENST00000571249 CLCNKBP51801 687 aa7.58□□□□□ -1.2
CHD3-213ENST00000571249 NPEPPSP55786 919 aa7.58□□□□□ -1.2
CHD3-213ENST00000571249 IL9RQ01113 521 aa7.58□□□□□ -1.2
CHD3-213ENST00000571249 SUZ12Q15022 739 aaKnown RBP7.58□□□□□ -1.2
CHD3-213ENST00000571249 PCBP1Q15365 356 aaKnown RBP eCLIP7.58□□□□□ -1.2
CHD3-213ENST00000571249 ARHGAP15Q53QZ3 475 aa7.58□□□□□ -1.2
CHD3-213ENST00000571249 SLC27A1Q6PCB7 646 aa7.58□□□□□ -1.2
CHD3-213ENST00000571249 ANO5Q75V66 913 aa7.58□□□□□ -1.2
CHD3-213ENST00000571249 ZNF654Q8IZM8 581 aa7.58□□□□□ -1.2
CHD3-213ENST00000571249 CCDC26Q8TAB7 109 aa7.58□□□□□ -1.2
CHD3-213ENST00000571249 EPS8L1Q8TE68 723 aa7.58□□□□□ -1.2
CHD3-213ENST00000571249 UBXN4Q92575 508 aa7.58□□□□□ -1.2
CHD3-213ENST00000571249 USP13Q92995 863 aaPredicted RBP7.58□□□□□ -1.2
CHD3-213ENST00000571249 ACAP3Q96P50 834 aa7.58□□□□□ -1.2
CHD3-213ENST00000571249 MIR1-1HGQ9H1L0 117 aa7.58□□□□□ -1.2
CHD3-213ENST00000571249 TASP1Q9H6P5 420 aa7.58□□□□□ -1.2
CHD3-213ENST00000571249 FTSJ1Q9UET6 329 aa7.58□□□□□ -1.2
CHD3-213ENST00000571249 SUSD2Q9UGT4 822 aa7.58□□□□□ -1.2
CHD3-213ENST00000571249 PCDHGC3Q9UN70 934 aa7.58□□□□□ -1.2
CHD3-213ENST00000571249 PLAAQ9Y263 795 aa7.58□□□□□ -1.2
CHD3-213ENST00000571249 SLCO1B1Q9Y6L6 691 aa7.58□□□□□ -1.2
CHD3-213ENST00000571249 SDK2Q58EX2 2172 aa7.58□□□□□ -1.2
CHD3-213ENST00000571249 MYO18AQ92614 2054 aaKnown RBP7.58□□□□□ -1.2
CHD3-213ENST00000571249 A0A1B0GTW7 788 aa7.57□□□□□ -1.2
CHD3-213ENST00000571249 A0A1B0GVT2 93 aa7.57□□□□□ -1.2
CHD3-213ENST00000571249 SMCO2A6NFE2 343 aa7.57□□□□□ -1.2
CHD3-213ENST00000571249 H7C4K7 107 aa7.57□□□□□ -1.2
CHD3-213ENST00000571249 TBX3O15119 743 aa7.57□□□□□ -1.2
CHD3-213ENST00000571249 ASAP2O43150 1006 aa7.57□□□□□ -1.2
CHD3-213ENST00000571249 GAS7O60861 476 aa7.57□□□□□ -1.2
CHD3-213ENST00000571249 SOAT2O75908 522 aa7.57□□□□□ -1.2
CHD3-213ENST00000571249 DDAH1O94760 285 aa7.57□□□□□ -1.2
CHD3-213ENST00000571249 RXRAP19793 462 aa7.57□□□□□ -1.2
CHD3-213ENST00000571249 SDSP20132 328 aa7.57□□□□□ -1.2
CHD3-213ENST00000571249 OPRD1P41143 372 aa7.57□□□□□ -1.2
CHD3-213ENST00000571249 GRK6P43250 576 aa7.57□□□□□ -1.2
CHD3-213ENST00000571249 CLCN6P51797 869 aa7.57□□□□□ -1.2
CHD3-213ENST00000571249 CDR1P51861 262 aa7.57□□□□□ -1.2
CHD3-213ENST00000571249 EPHB3P54753 998 aa7.57□□□□□ -1.2
CHD3-213ENST00000571249 PTENP60484 403 aa7.57□□□□□ -1.2
CHD3-213ENST00000571249 CYP4A11Q02928 519 aa7.57□□□□□ -1.2
CHD3-213ENST00000571249 KIF19Q2TAC6 998 aa7.57□□□□□ -1.2
CHD3-213ENST00000571249 C8orf34Q49A92 452 aa7.57□□□□□ -1.2
CHD3-213ENST00000571249 CTXN3Q4LDR2 81 aa7.57□□□□□ -1.2
CHD3-213ENST00000571249 CCDC81Q6ZN84 652 aa7.57□□□□□ -1.2
CHD3-213ENST00000571249 NUDT18Q6ZVK8 323 aa7.57□□□□□ -1.2
CHD3-213ENST00000571249 MIER3Q7Z3K6 550 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms