RNA–Protein interactions for RNA: ENST00000569904.5

SCAMP2-212, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 5

Gene SCAMP2, Length 858 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-212ENST00000569904 DCLK2Q8N568 766 aa13.29□□□□□ -0.28
SCAMP2-212ENST00000569904 KBTBD7Q8WVZ9 684 aa13.29□□□□□ -0.28
SCAMP2-212ENST00000569904 USP13Q92995 863 aaPredicted RBP13.29□□□□□ -0.28
SCAMP2-212ENST00000569904 HPS3Q969F9 1004 aa13.29□□□□□ -0.28
SCAMP2-212ENST00000569904 RMDN1Q96DB5 314 aa13.29□□□□□ -0.28
SCAMP2-212ENST00000569904 ZFYVE19Q96K21 471 aa13.29□□□□□ -0.28
SCAMP2-212ENST00000569904 FAM84AQ96KN4 292 aa13.29□□□□□ -0.28
SCAMP2-212ENST00000569904 FOXD4L1Q9NU39 408 aa13.29□□□□□ -0.28
SCAMP2-212ENST00000569904 TDP1Q9NUW8 608 aa13.29□□□□□ -0.28
SCAMP2-212ENST00000569904 THG1LQ9NWX6 298 aaKnown RBP13.29□□□□□ -0.28
SCAMP2-212ENST00000569904 TFIP11Q9UBB9 837 aaKnown RBP13.29□□□□□ -0.28
SCAMP2-212ENST00000569904 GTF3C4Q9UKN8 822 aa13.29□□□□□ -0.28
SCAMP2-212ENST00000569904 EML5Q05BV3 1969 aa13.29□□□□□ -0.28
SCAMP2-212ENST00000569904 K7ESF4 209 aa13.28□□□□□ -0.28
SCAMP2-212ENST00000569904 TNNC2P02585 160 aa13.28□□□□□ -0.28
SCAMP2-212ENST00000569904 KRT19P08727 400 aa13.28□□□□□ -0.28
SCAMP2-212ENST00000569904 TCF3P15923 654 aa13.28□□□□□ -0.28
SCAMP2-212ENST00000569904 TGM1P22735 817 aa13.28□□□□□ -0.28
SCAMP2-212ENST00000569904 ACAT1P24752 427 aaKnown RBP13.28□□□□□ -0.28
SCAMP2-212ENST00000569904 CYP2F1P24903 491 aa13.28□□□□□ -0.28
SCAMP2-212ENST00000569904 AVPR1AP37288 418 aa13.28□□□□□ -0.28
SCAMP2-212ENST00000569904 SATB1Q01826 763 aa13.28□□□□□ -0.28
SCAMP2-212ENST00000569904 TNK2Q07912 1038 aa13.28□□□□□ -0.28
SCAMP2-212ENST00000569904 ITPRIPL2Q3MIP1 535 aa13.28□□□□□ -0.28
SCAMP2-212ENST00000569904 FAM26FQ5R3K3 315 aa13.28□□□□□ -0.28
SCAMP2-212ENST00000569904 GPIHBP1Q8IV16 184 aa13.28□□□□□ -0.28
SCAMP2-212ENST00000569904 RIN3Q8TB24 985 aa13.28□□□□□ -0.28
SCAMP2-212ENST00000569904 TMEM174Q8WUU8 243 aa13.28□□□□□ -0.28
SCAMP2-212ENST00000569904 SCFD1Q8WVM8 642 aa13.28□□□□□ -0.28
SCAMP2-212ENST00000569904 DHX58Q96C10 678 aa13.28□□□□□ -0.28
SCAMP2-212ENST00000569904 CHFRQ96EP1 664 aa13.28□□□□□ -0.28
SCAMP2-212ENST00000569904 HPDLQ96IR7 371 aa13.28□□□□□ -0.28
SCAMP2-212ENST00000569904 SPATA17Q96L03 361 aa13.28□□□□□ -0.28
SCAMP2-212ENST00000569904 HPS4Q9NQG7 708 aa13.28□□□□□ -0.28
SCAMP2-212ENST00000569904 AGPAT3Q9NRZ7 376 aa13.28□□□□□ -0.28
SCAMP2-212ENST00000569904 CDH9Q9ULB4 789 aa13.28□□□□□ -0.28
SCAMP2-212ENST00000569904 CCL26Q9Y258 94 aa13.28□□□□□ -0.28
SCAMP2-212ENST00000569904 GPR179Q6PRD1 2367 aa13.28□□□□□ -0.28
SCAMP2-212ENST00000569904 PVALEFA0A1B0GWK0 134 aa13.27□□□□□ -0.29
SCAMP2-212ENST00000569904 STAU1O95793 577 aaKnown RBP13.27□□□□□ -0.29
SCAMP2-212ENST00000569904 F13A1P00488 732 aa13.27□□□□□ -0.29
SCAMP2-212ENST00000569904 ZSCAN22P10073 491 aaPredicted RBP13.27□□□□□ -0.29
SCAMP2-212ENST00000569904 WARSP23381 471 aaKnown RBP13.27□□□□□ -0.29
SCAMP2-212ENST00000569904 CNR2P34972 360 aa13.27□□□□□ -0.29
SCAMP2-212ENST00000569904 CDR1P51861 262 aa13.27□□□□□ -0.29
SCAMP2-212ENST00000569904 ASIC1P78348 528 aa13.27□□□□□ -0.29
SCAMP2-212ENST00000569904 RUNX3Q13761 415 aa13.27□□□□□ -0.29
SCAMP2-212ENST00000569904 PSMD6Q15008 389 aa13.27□□□□□ -0.29
SCAMP2-212ENST00000569904 MAPRE1Q15691 268 aaKnown RBP13.27□□□□□ -0.29
SCAMP2-212ENST00000569904 SNRNP35Q16560 246 aaKnown RBP13.27□□□□□ -0.29
SCAMP2-212ENST00000569904 DDR2Q16832 855 aa13.27□□□□□ -0.29
SCAMP2-212ENST00000569904 TMEM196Q5HYL7 178 aa13.27□□□□□ -0.29
SCAMP2-212ENST00000569904 LMBRD2Q68DH5 695 aaPredicted RBP13.27□□□□□ -0.29
SCAMP2-212ENST00000569904 TXNDC8Q6A555 127 aa13.27□□□□□ -0.29
SCAMP2-212ENST00000569904 VSTM1Q6UX27 236 aa13.27□□□□□ -0.29
SCAMP2-212ENST00000569904 C4orf50Q6ZRC1 276 aa13.27□□□□□ -0.29
SCAMP2-212ENST00000569904 Q6ZS52 159 aa13.27□□□□□ -0.29
SCAMP2-212ENST00000569904 TRAPPC11Q7Z392 1133 aa13.27□□□□□ -0.29
SCAMP2-212ENST00000569904 MAB21L3Q8N8X9 362 aa13.27□□□□□ -0.29
SCAMP2-212ENST00000569904 MRPS31Q92665 395 aaKnown RBP13.27□□□□□ -0.29
SCAMP2-212ENST00000569904 SECISBP2LQ93073 1101 aaKnown RBP13.27□□□□□ -0.29
SCAMP2-212ENST00000569904 HINFPQ9BQA5 517 aa13.27□□□□□ -0.29
SCAMP2-212ENST00000569904 SMG9Q9H0W8 520 aaKnown RBP13.27□□□□□ -0.29
SCAMP2-212ENST00000569904 GZF1Q9H116 711 aaPredicted RBP13.27□□□□□ -0.29
SCAMP2-212ENST00000569904 GKN1Q9NS71 199 aa13.27□□□□□ -0.29
SCAMP2-212ENST00000569904 RBM12Q9NTZ6 932 aaKnown RBP13.27□□□□□ -0.29
SCAMP2-212ENST00000569904 CGNQ9P2M7 1197 aaKnown RBP13.27□□□□□ -0.29
SCAMP2-212ENST00000569904 NCDNQ9UBB6 729 aa13.27□□□□□ -0.29
SCAMP2-212ENST00000569904 OTOL1A6NHN0 477 aaPredicted RBP13.26□□□□□ -0.29
SCAMP2-212ENST00000569904 TRDMT1O14717 391 aaKnown RBP13.26□□□□□ -0.29
SCAMP2-212ENST00000569904 POLR2DO15514 142 aaKnown RBP13.26□□□□□ -0.29
SCAMP2-212ENST00000569904 HCRTO43612 131 aa13.26□□□□□ -0.29
SCAMP2-212ENST00000569904 TACC1O75410 805 aa13.26□□□□□ -0.29
SCAMP2-212ENST00000569904 CST3P01034 146 aaPredicted RBP13.26□□□□□ -0.29
SCAMP2-212ENST00000569904 PFKLP17858 780 aa13.26□□□□□ -0.29
SCAMP2-212ENST00000569904 LMO2P25791 158 aa13.26□□□□□ -0.29
SCAMP2-212ENST00000569904 FAM160A1Q05DH4 1040 aa13.26□□□□□ -0.29
SCAMP2-212ENST00000569904 CYP24A1Q07973 514 aa13.26□□□□□ -0.29
SCAMP2-212ENST00000569904 USP4Q13107 963 aa13.26□□□□□ -0.29
SCAMP2-212ENST00000569904 PUM1Q14671 1186 aaKnown RBP eCLIP13.26□□□□□ -0.29
SCAMP2-212ENST00000569904 PON2Q15165 354 aa13.26□□□□□ -0.29
SCAMP2-212ENST00000569904 CCDC142Q17RM4 750 aa13.26□□□□□ -0.29
SCAMP2-212ENST00000569904 SDHAF4Q5VUM1 108 aa13.26□□□□□ -0.29
SCAMP2-212ENST00000569904 RESP18Q5W5W9 173 aa13.26□□□□□ -0.29
SCAMP2-212ENST00000569904 LAIR1Q6GTX8 287 aa13.26□□□□□ -0.29
SCAMP2-212ENST00000569904 SPATA2LQ8IUW3 424 aaPredicted RBP13.26□□□□□ -0.29
SCAMP2-212ENST00000569904 KIAA1958Q8N8K9 716 aa13.26□□□□□ -0.29
SCAMP2-212ENST00000569904 XXYLT1Q8NBI6 393 aa13.26□□□□□ -0.29
SCAMP2-212ENST00000569904 STKLD1Q8NE28 680 aa13.26□□□□□ -0.29
SCAMP2-212ENST00000569904 CGRRF1Q99675 332 aa13.26□□□□□ -0.29
SCAMP2-212ENST00000569904 SYT15Q9BQS2 421 aa13.26□□□□□ -0.29
SCAMP2-212ENST00000569904 CEP250Q9BV73 2442 aa13.26□□□□□ -0.29
SCAMP2-212ENST00000569904 CRTAC1Q9NQ79 661 aa13.26□□□□□ -0.29
SCAMP2-212ENST00000569904 GCNT4Q9P109 453 aa13.26□□□□□ -0.29
SCAMP2-212ENST00000569904 PCDHA7Q9UN72 937 aa13.26□□□□□ -0.29
SCAMP2-212ENST00000569904 RALGAPA1Q6GYQ0 2036 aa13.25□□□□□ -0.29
SCAMP2-212ENST00000569904 CCDC163A0A0D9SF12 145 aa13.25□□□□□ -0.29
SCAMP2-212ENST00000569904 CHURC1-FNTBB4DL54 471 aa13.25□□□□□ -0.29
SCAMP2-212ENST00000569904 LRP3O75074 770 aa13.25□□□□□ -0.29
SCAMP2-212ENST00000569904 SDHBP21912 280 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms