RNA–Protein interactions for RNA: ENST00000569720.1

SPG7-221, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 909 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-221ENST00000569720 HEATR6Q6AI08 1181 aaKnown RBP14.08□□□□□ -0.16
SPG7-221ENST00000569720 ATL3Q6DD88 541 aa14.08□□□□□ -0.16
SPG7-221ENST00000569720 C4orf50Q6ZRC1 276 aa14.08□□□□□ -0.16
SPG7-221ENST00000569720 DPH6Q7L8W6 267 aa14.08□□□□□ -0.16
SPG7-221ENST00000569720 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.08□□□□□ -0.16
SPG7-221ENST00000569720 TMEM150AQ86TG1 271 aa14.08□□□□□ -0.16
SPG7-221ENST00000569720 MON1AQ86VX9 555 aa14.08□□□□□ -0.16
SPG7-221ENST00000569720 USP13Q92995 863 aaPredicted RBP14.08□□□□□ -0.16
SPG7-221ENST00000569720 TRMT2BQ96GJ1 504 aaKnown RBP14.08□□□□□ -0.16
SPG7-221ENST00000569720 FUBP3Q96I24 572 aaKnown RBP eCLIP14.08□□□□□ -0.16
SPG7-221ENST00000569720 ZNF396Q96N95 335 aaPredicted RBP14.08□□□□□ -0.16
SPG7-221ENST00000569720 FAM83CQ9BQN1 747 aa14.08□□□□□ -0.16
SPG7-221ENST00000569720 MTMR12Q9C0I1 747 aa14.08□□□□□ -0.16
SPG7-221ENST00000569720 CUEDC2Q9H467 287 aa14.08□□□□□ -0.16
SPG7-221ENST00000569720 INTS13Q9NVM9 706 aa14.08□□□□□ -0.16
SPG7-221ENST00000569720 GTF3C4Q9UKN8 822 aa14.08□□□□□ -0.16
SPG7-221ENST00000569720 ANAPC1Q9H1A4 1944 aa14.07□□□□□ -0.16
SPG7-221ENST00000569720 ATG2BQ96BY7 2078 aa14.07□□□□□ -0.16
SPG7-221ENST00000569720 A0A087X0B3 334 aa14.07□□□□□ -0.16
SPG7-221ENST00000569720 MED19A0JLT2 244 aaPredicted RBP14.07□□□□□ -0.16
SPG7-221ENST00000569720 K7ESF4 209 aa14.07□□□□□ -0.16
SPG7-221ENST00000569720 ATG13O75143 517 aa14.07□□□□□ -0.16
SPG7-221ENST00000569720 NOL4O94818 638 aa14.07□□□□□ -0.16
SPG7-221ENST00000569720 GPR15P49685 360 aa14.07□□□□□ -0.16
SPG7-221ENST00000569720 SPEM2Q0P670 501 aa14.07□□□□□ -0.16
SPG7-221ENST00000569720 ZNF268Q14587 947 aaPredicted RBP14.07□□□□□ -0.16
SPG7-221ENST00000569720 PDGFRLQ15198 375 aa14.07□□□□□ -0.16
SPG7-221ENST00000569720 DUOXA2Q1HG44 320 aa14.07□□□□□ -0.16
SPG7-221ENST00000569720 CFAP221Q4G0U5 840 aa14.07□□□□□ -0.16
SPG7-221ENST00000569720 SDHAF4Q5VUM1 108 aa14.07□□□□□ -0.16
SPG7-221ENST00000569720 CEP68Q76N32 757 aa14.07□□□□□ -0.16
SPG7-221ENST00000569720 SCN4BQ8IWT1 228 aa14.07□□□□□ -0.16
SPG7-221ENST00000569720 FSIP1Q8NA03 581 aa14.07□□□□□ -0.16
SPG7-221ENST00000569720 FGFBP2Q9BYJ0 223 aa14.07□□□□□ -0.16
SPG7-221ENST00000569720 EBF3Q9H4W6 596 aa14.07□□□□□ -0.16
SPG7-221ENST00000569720 KIAA1586Q9HCI6 787 aa14.07□□□□□ -0.16
SPG7-221ENST00000569720 TRPC7Q9HCX4 862 aa14.07□□□□□ -0.16
SPG7-221ENST00000569720 FOXD4L1Q9NU39 408 aa14.07□□□□□ -0.16
SPG7-221ENST00000569720 CHMP5Q9NZZ3 219 aa14.07□□□□□ -0.16
SPG7-221ENST00000569720 CCL26Q9Y258 94 aa14.07□□□□□ -0.16
SPG7-221ENST00000569720 GREB1Q4ZG55 1949 aa14.07□□□□□ -0.16
SPG7-221ENST00000569720 SPAG17Q6Q759 2223 aa14.06□□□□□ -0.16
SPG7-221ENST00000569720 GABRDO14764 452 aa14.06□□□□□ -0.16
SPG7-221ENST00000569720 SPTLC2O15270 562 aa14.06□□□□□ -0.16
SPG7-221ENST00000569720 HRO43593 1189 aa14.06□□□□□ -0.16
SPG7-221ENST00000569720 PPP6R2O75170 966 aa14.06□□□□□ -0.16
SPG7-221ENST00000569720 USP17L7P0C7H9 530 aa14.06□□□□□ -0.16
SPG7-221ENST00000569720 TGM1P22735 817 aa14.06□□□□□ -0.16
SPG7-221ENST00000569720 HOXA6P31267 233 aa14.06□□□□□ -0.16
SPG7-221ENST00000569720 ASIC1P78348 528 aa14.06□□□□□ -0.16
SPG7-221ENST00000569720 DMWDQ09019 674 aa14.06□□□□□ -0.16
SPG7-221ENST00000569720 MAPRE1Q15691 268 aaKnown RBP14.06□□□□□ -0.16
SPG7-221ENST00000569720 SOWAHAQ2M3V2 549 aa14.06□□□□□ -0.16
SPG7-221ENST00000569720 TMEM196Q5HYL7 178 aa14.06□□□□□ -0.16
SPG7-221ENST00000569720 WDR44Q5JSH3 913 aa14.06□□□□□ -0.16
SPG7-221ENST00000569720 LMBRD2Q68DH5 695 aaPredicted RBP14.06□□□□□ -0.16
SPG7-221ENST00000569720 TRIM68Q6AZZ1 485 aa14.06□□□□□ -0.16
SPG7-221ENST00000569720 OSTM1Q86WC4 334 aa14.06□□□□□ -0.16
SPG7-221ENST00000569720 LINC00301Q8NCQ3 95 aa14.06□□□□□ -0.16
SPG7-221ENST00000569720 STKLD1Q8NE28 680 aa14.06□□□□□ -0.16
SPG7-221ENST00000569720 CXorf38Q8TB03 319 aa14.06□□□□□ -0.16
SPG7-221ENST00000569720 HPDLQ96IR7 371 aa14.06□□□□□ -0.16
SPG7-221ENST00000569720 MYRFLQ96LU7 910 aa14.06□□□□□ -0.16
SPG7-221ENST00000569720 SYT15Q9BQS2 421 aa14.06□□□□□ -0.16
SPG7-221ENST00000569720 RTKNQ9BST9 563 aa14.06□□□□□ -0.16
SPG7-221ENST00000569720 PARD6AQ9NPB6 346 aa14.06□□□□□ -0.16
SPG7-221ENST00000569720 HPS4Q9NQG7 708 aa14.06□□□□□ -0.16
SPG7-221ENST00000569720 HSPBP1Q9NZL4 362 aa14.06□□□□□ -0.16
SPG7-221ENST00000569720 MAGEC2Q9UBF1 373 aaPredicted RBP14.06□□□□□ -0.16
SPG7-221ENST00000569720 SIX4Q9UIU6 781 aa14.06□□□□□ -0.16
SPG7-221ENST00000569720 HELZP42694 1942 aaKnown RBP14.05□□□□□ -0.16
SPG7-221ENST00000569720 TRAV19A0A0A6YYK7 116 aa14.05□□□□□ -0.16
SPG7-221ENST00000569720 TRDMT1O14717 391 aaKnown RBP14.05□□□□□ -0.16
SPG7-221ENST00000569720 EIF3DO15371 548 aaKnown RBP eCLIP14.05□□□□□ -0.16
SPG7-221ENST00000569720 FOXD2O60548 495 aaPredicted RBP14.05□□□□□ -0.16
SPG7-221ENST00000569720 CKMP06732 381 aa14.05□□□□□ -0.16
SPG7-221ENST00000569720 DRD1P21728 446 aa14.05□□□□□ -0.16
SPG7-221ENST00000569720 MAGEA11P43364 429 aa14.05□□□□□ -0.16
SPG7-221ENST00000569720 PDE6CP51160 858 aa14.05□□□□□ -0.16
SPG7-221ENST00000569720 ATXN1P54253 815 aaKnown RBP14.05□□□□□ -0.16
SPG7-221ENST00000569720 FAM160A1Q05DH4 1040 aa14.05□□□□□ -0.16
SPG7-221ENST00000569720 WDR5BQ86VZ2 330 aa14.05□□□□□ -0.16
SPG7-221ENST00000569720 WDR49Q8IV35 697 aa14.05□□□□□ -0.16
SPG7-221ENST00000569720 CPA6Q8N4T0 437 aa14.05□□□□□ -0.16
SPG7-221ENST00000569720 IQUBQ8NA54 791 aa14.05□□□□□ -0.16
SPG7-221ENST00000569720 FAM84AQ96KN4 292 aa14.05□□□□□ -0.16
SPG7-221ENST00000569720 PKMYT1Q99640 499 aa14.05□□□□□ -0.16
SPG7-221ENST00000569720 TRIM9Q9C026 710 aa14.05□□□□□ -0.16
SPG7-221ENST00000569720 KBTBD4Q9NVX7 518 aa14.05□□□□□ -0.16
SPG7-221ENST00000569720 CDH9Q9ULB4 789 aa14.05□□□□□ -0.16
SPG7-221ENST00000569720 SLC8A2Q9UPR5 921 aa14.05□□□□□ -0.16
SPG7-221ENST00000569720 PTPRDP23468 1912 aa14.05□□□□□ -0.16
SPG7-221ENST00000569720 CUTAO60888 179 aa14.04□□□□□ -0.16
SPG7-221ENST00000569720 TADA3O75528 432 aa14.04□□□□□ -0.16
SPG7-221ENST00000569720 ZSCAN22P10073 491 aaPredicted RBP14.04□□□□□ -0.16
SPG7-221ENST00000569720 TNNI1P19237 187 aa14.04□□□□□ -0.16
SPG7-221ENST00000569720 ANXA13P27216 316 aa14.04□□□□□ -0.16
SPG7-221ENST00000569720 IFNAR2P48551 515 aa14.04□□□□□ -0.16
SPG7-221ENST00000569720 NR1H3Q13133 447 aa14.04□□□□□ -0.16
SPG7-221ENST00000569720 SRSF5Q13243 272 aaKnown RBP14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms