RNA–Protein interactions for RNA: ENST00000569455.1

CDH13-214, Transcript of cadherin 13, humanhuman

TSL 3

Gene CDH13, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-214ENST00000569455 PARVAQ9NVD7 372 aa8.09□□□□□ -1.11
CDH13-214ENST00000569455 WDR35Q9P2L0 1181 aa8.09□□□□□ -1.11
CDH13-214ENST00000569455 RNF14Q9UBS8 474 aa8.09□□□□□ -1.11
CDH13-214ENST00000569455 HMGXB4Q9UGU5 601 aa8.09□□□□□ -1.11
CDH13-214ENST00000569455 DSEQ9UL01 958 aa8.09□□□□□ -1.11
CDH13-214ENST00000569455 L1RE1Q9UN81 338 aa8.09□□□□□ -1.11
CDH13-214ENST00000569455 BDP1A6H8Y1 2624 aa8.09□□□□□ -1.11
CDH13-214ENST00000569455 NCOR1O75376 2440 aa8.09□□□□□ -1.11
CDH13-214ENST00000569455 UQCRHLA0A096LP55 91 aa8.08□□□□□ -1.12
CDH13-214ENST00000569455 CTAGE15A4D2H0 777 aa8.08□□□□□ -1.12
CDH13-214ENST00000569455 MIF4GDA9UHW6 222 aaKnown RBP8.08□□□□□ -1.12
CDH13-214ENST00000569455 MYO1FO00160 1098 aa8.08□□□□□ -1.12
CDH13-214ENST00000569455 ATMINO43313 823 aaPredicted RBP8.08□□□□□ -1.12
CDH13-214ENST00000569455 BUB1BO60566 1050 aaPredicted RBP8.08□□□□□ -1.12
CDH13-214ENST00000569455 B3GAT3O94766 335 aa8.08□□□□□ -1.12
CDH13-214ENST00000569455 MICAL2O94851 1124 aa8.08□□□□□ -1.12
CDH13-214ENST00000569455 FTCDO95954 541 aa8.08□□□□□ -1.12
CDH13-214ENST00000569455 UQCRHP07919 91 aa8.08□□□□□ -1.12
CDH13-214ENST00000569455 CFHP08603 1231 aa8.08□□□□□ -1.12
CDH13-214ENST00000569455 CTAGE8P0CG41 777 aa8.08□□□□□ -1.12
CDH13-214ENST00000569455 PCSK1P29120 753 aa8.08□□□□□ -1.12
CDH13-214ENST00000569455 SSTR3P32745 418 aaPredicted RBP8.08□□□□□ -1.12
CDH13-214ENST00000569455 SLC1A1P43005 524 aa8.08□□□□□ -1.12
CDH13-214ENST00000569455 PAFAH1B1P43034 410 aa8.08□□□□□ -1.12
CDH13-214ENST00000569455 AARSP49588 968 aaKnown RBP eCLIP8.08□□□□□ -1.12
CDH13-214ENST00000569455 AFF1P51825 1210 aaKnown RBP8.08□□□□□ -1.12
CDH13-214ENST00000569455 SLC8A3P57103 927 aa8.08□□□□□ -1.12
CDH13-214ENST00000569455 ORC1Q13415 861 aa8.08□□□□□ -1.12
CDH13-214ENST00000569455 GOLGA7BQ2TAP0 167 aa8.08□□□□□ -1.12
CDH13-214ENST00000569455 CLLU1OSQ5K130 101 aa8.08□□□□□ -1.12
CDH13-214ENST00000569455 CCDC181Q5TID7 509 aa8.08□□□□□ -1.12
CDH13-214ENST00000569455 PLEKHA7Q6IQ23 1121 aa8.08□□□□□ -1.12
CDH13-214ENST00000569455 DNAJC24Q6P3W2 148 aa8.08□□□□□ -1.12
CDH13-214ENST00000569455 ZNF365Q70YC5 407 aa8.08□□□□□ -1.12
CDH13-214ENST00000569455 C16orf59Q7L2K0 433 aa8.08□□□□□ -1.12
CDH13-214ENST00000569455 CTAGE6Q86UF2 777 aa8.08□□□□□ -1.12
CDH13-214ENST00000569455 NT5DC3Q86UY8 548 aa8.08□□□□□ -1.12
CDH13-214ENST00000569455 NPAS4Q8IUM7 802 aa8.08□□□□□ -1.12
CDH13-214ENST00000569455 CTAGE4Q8IX94 777 aa8.08□□□□□ -1.12
CDH13-214ENST00000569455 PDCL2Q8N4E4 241 aa8.08□□□□□ -1.12
CDH13-214ENST00000569455 UBL4BQ8N7F7 174 aa8.08□□□□□ -1.12
CDH13-214ENST00000569455 C18orf8Q96DM3 657 aa8.08□□□□□ -1.12
CDH13-214ENST00000569455 VWCEQ96DN2 955 aa8.08□□□□□ -1.12
CDH13-214ENST00000569455 PBKQ96KB5 322 aa8.08□□□□□ -1.12
CDH13-214ENST00000569455 OSBPL9Q96SU4 736 aa8.08□□□□□ -1.12
CDH13-214ENST00000569455 SLC9A7Q96T83 725 aa8.08□□□□□ -1.12
CDH13-214ENST00000569455 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.08□□□□□ -1.12
CDH13-214ENST00000569455 SELENOOQ9BVL4 669 aa8.08□□□□□ -1.12
CDH13-214ENST00000569455 CARD6Q9BX69 1037 aa8.08□□□□□ -1.12
CDH13-214ENST00000569455 TBC1D13Q9NVG8 400 aa8.08□□□□□ -1.12
CDH13-214ENST00000569455 ANAPC7Q9UJX3 599 aa8.08□□□□□ -1.12
CDH13-214ENST00000569455 TSPAN16Q9UKR8 245 aa8.08□□□□□ -1.12
CDH13-214ENST00000569455 COG5Q9UP83 839 aa8.08□□□□□ -1.12
CDH13-214ENST00000569455 TSC2P49815 1807 aa8.08□□□□□ -1.12
CDH13-214ENST00000569455 TRANK1O15050 2925 aa8.07□□□□□ -1.12
CDH13-214ENST00000569455 FNDC1Q4ZHG4 1894 aaPredicted RBP8.07□□□□□ -1.12
CDH13-214ENST00000569455 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.07□□□□□ -1.12
CDH13-214ENST00000569455 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.07□□□□□ -1.12
CDH13-214ENST00000569455 FAM170AA1A519 330 aa8.07□□□□□ -1.12
CDH13-214ENST00000569455 TMEM110-MUSTN1A8MSY1 372 aa8.07□□□□□ -1.12
CDH13-214ENST00000569455 TMEM189-UBE2V1I3L0A0 370 aa8.07□□□□□ -1.12
CDH13-214ENST00000569455 M0QZQ0 153 aa8.07□□□□□ -1.12
CDH13-214ENST00000569455 CES2O00748 559 aa8.07□□□□□ -1.12
CDH13-214ENST00000569455 GABRDO14764 452 aa8.07□□□□□ -1.12
CDH13-214ENST00000569455 TRAPPC3O43617 180 aa8.07□□□□□ -1.12
CDH13-214ENST00000569455 NCK2O43639 380 aa8.07□□□□□ -1.12
CDH13-214ENST00000569455 SPOPO43791 374 aa8.07□□□□□ -1.12
CDH13-214ENST00000569455 AMHP03971 560 aa8.07□□□□□ -1.12
CDH13-214ENST00000569455 PDGFRBP09619 1106 aa8.07□□□□□ -1.12
CDH13-214ENST00000569455 FGFR1P11362 822 aa8.07□□□□□ -1.12
CDH13-214ENST00000569455 TYMPP19971 482 aa8.07□□□□□ -1.12
CDH13-214ENST00000569455 GTF2F1P35269 517 aaKnown RBP eCLIP8.07□□□□□ -1.12
CDH13-214ENST00000569455 GPD2P43304 727 aa8.07□□□□□ -1.12
CDH13-214ENST00000569455 BCAT1P54687 386 aa8.07□□□□□ -1.12
CDH13-214ENST00000569455 GSCP56915 257 aaPredicted RBP8.07□□□□□ -1.12
CDH13-214ENST00000569455 PSMC1P62191 440 aaKnown RBP8.07□□□□□ -1.12
CDH13-214ENST00000569455 DSC1Q08554 894 aa8.07□□□□□ -1.12
CDH13-214ENST00000569455 BST2Q10589 180 aaKnown RBP8.07□□□□□ -1.12
CDH13-214ENST00000569455 PTP4A2Q12974 167 aa8.07□□□□□ -1.12
CDH13-214ENST00000569455 PDCLQ13371 301 aa8.07□□□□□ -1.12
CDH13-214ENST00000569455 MAMLD1Q13495 774 aa8.07□□□□□ -1.12
CDH13-214ENST00000569455 ZNF268Q14587 947 aaPredicted RBP8.07□□□□□ -1.12
CDH13-214ENST00000569455 MESDQ14696 234 aa8.07□□□□□ -1.12
CDH13-214ENST00000569455 CLUL1Q15846 466 aa8.07□□□□□ -1.12
CDH13-214ENST00000569455 CFAP221Q4G0U5 840 aa8.07□□□□□ -1.12
CDH13-214ENST00000569455 TIGD5Q53EQ6 642 aa8.07□□□□□ -1.12
CDH13-214ENST00000569455 PPP1R26Q5T8A7 1209 aaPredicted RBP8.07□□□□□ -1.12
CDH13-214ENST00000569455 WSCD1Q658N2 575 aa8.07□□□□□ -1.12
CDH13-214ENST00000569455 DCUN1D2Q6PH85 259 aa8.07□□□□□ -1.12
CDH13-214ENST00000569455 DEFB128Q7Z7B8 93 aa8.07□□□□□ -1.12
CDH13-214ENST00000569455 COLGALT2Q8IYK4 626 aa8.07□□□□□ -1.12
CDH13-214ENST00000569455 THEM5Q8N1Q8 247 aa8.07□□□□□ -1.12
CDH13-214ENST00000569455 WDTC1Q8N5D0 677 aa8.07□□□□□ -1.12
CDH13-214ENST00000569455 ANKRD52Q8NB46 1076 aa8.07□□□□□ -1.12
CDH13-214ENST00000569455 B3GALNT2Q8NCR0 500 aa8.07□□□□□ -1.12
CDH13-214ENST00000569455 C3orf20Q8ND61 904 aa8.07□□□□□ -1.12
CDH13-214ENST00000569455 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.07□□□□□ -1.12
CDH13-214ENST00000569455 FEZF2Q8TBJ5 459 aa8.07□□□□□ -1.12
CDH13-214ENST00000569455 ADAMTS19Q8TE59 1207 aa8.07□□□□□ -1.12
CDH13-214ENST00000569455 STK32AQ8WU08 396 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms