RNA–Protein interactions for RNA: ENST00000569252.5

USB1-215, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-215ENST00000569252 CLSTN3Q9BQT9 956 aa17.06■□□□□ 0.32
USB1-215ENST00000569252 EDEM3Q9BZQ6 932 aa17.06■□□□□ 0.32
USB1-215ENST00000569252 SDCBP2Q9H190 292 aa17.06■□□□□ 0.32
USB1-215ENST00000569252 SIX2Q9NPC8 291 aa17.06■□□□□ 0.32
USB1-215ENST00000569252 NLRC4Q9NPP4 1024 aa17.06■□□□□ 0.32
USB1-215ENST00000569252 CEP72Q9P209 647 aa17.06■□□□□ 0.32
USB1-215ENST00000569252 TEX28O15482 410 aa17.05■□□□□ 0.32
USB1-215ENST00000569252 CILPO75339 1184 aa17.05■□□□□ 0.32
USB1-215ENST00000569252 SRGAP2BP0DMP2 458 aa17.05■□□□□ 0.32
USB1-215ENST00000569252 STAT1P42224 750 aa17.05■□□□□ 0.32
USB1-215ENST00000569252 CYP27A1Q02318 531 aa17.05■□□□□ 0.32
USB1-215ENST00000569252 APBA1Q02410 837 aa17.05■□□□□ 0.32
USB1-215ENST00000569252 PTK2Q05397 1052 aa17.05■□□□□ 0.32
USB1-215ENST00000569252 RAB33AQ14088 237 aa17.05■□□□□ 0.32
USB1-215ENST00000569252 TRIM14Q14142 442 aa17.05■□□□□ 0.32
USB1-215ENST00000569252 DRAP1Q14919 205 aaPredicted RBP17.05■□□□□ 0.32
USB1-215ENST00000569252 SLC39A12Q504Y0 691 aa17.05■□□□□ 0.32
USB1-215ENST00000569252 INTS6LQ5JSJ4 861 aaKnown RBP17.05■□□□□ 0.32
USB1-215ENST00000569252 TPGS2Q68CL5 300 aa17.05■□□□□ 0.32
USB1-215ENST00000569252 SLC8B1Q6J4K2 584 aa17.05■□□□□ 0.32
USB1-215ENST00000569252 ACOT1Q86TX2 421 aa17.05■□□□□ 0.32
USB1-215ENST00000569252 OSTM1Q86WC4 334 aa17.05■□□□□ 0.32
USB1-215ENST00000569252 SPATA2LQ8IUW3 424 aaPredicted RBP17.05■□□□□ 0.32
USB1-215ENST00000569252 B3GALNT2Q8NCR0 500 aa17.05■□□□□ 0.32
USB1-215ENST00000569252 SMRP1Q8NCR6 262 aa17.05■□□□□ 0.32
USB1-215ENST00000569252 C2orf15Q8WU43 125 aaKnown RBP17.05■□□□□ 0.32
USB1-215ENST00000569252 MED10Q9BTT4 135 aa17.05■□□□□ 0.32
USB1-215ENST00000569252 ZCWPW1Q9H0M4 648 aa17.05■□□□□ 0.32
USB1-215ENST00000569252 GRPEL1Q9HAV7 217 aa17.05■□□□□ 0.32
USB1-215ENST00000569252 GTF3C4Q9UKN8 822 aa17.05■□□□□ 0.32
USB1-215ENST00000569252 MAFFQ9ULX9 164 aa17.05■□□□□ 0.32
USB1-215ENST00000569252 FHOD1Q9Y613 1164 aa17.05■□□□□ 0.32
USB1-215ENST00000569252 ATP8B3O60423 1300 aa17.04■□□□□ 0.32
USB1-215ENST00000569252 ITIH6Q6UXX5 1313 aa17.04■□□□□ 0.32
USB1-215ENST00000569252 GOLGA6L6A8MZA4 724 aa17.04■□□□□ 0.32
USB1-215ENST00000569252 NCK2O43639 380 aa17.04■□□□□ 0.32
USB1-215ENST00000569252 TBC1D4O60343 1298 aa17.04■□□□□ 0.32
USB1-215ENST00000569252 C1RP00736 705 aa17.04■□□□□ 0.32
USB1-215ENST00000569252 PAEPP09466 180 aa17.04■□□□□ 0.32
USB1-215ENST00000569252 CD19P15391 556 aa17.04■□□□□ 0.32
USB1-215ENST00000569252 ZNF75DP51815 510 aa17.04■□□□□ 0.32
USB1-215ENST00000569252 SLC8A3P57103 927 aa17.04■□□□□ 0.32
USB1-215ENST00000569252 PSMC1P62191 440 aaKnown RBP17.04■□□□□ 0.32
USB1-215ENST00000569252 ZXDAP98168 799 aa17.04■□□□□ 0.32
USB1-215ENST00000569252 GPR17Q13304 367 aa17.04■□□□□ 0.32
USB1-215ENST00000569252 GSE1Q14687 1217 aa17.04■□□□□ 0.32
USB1-215ENST00000569252 PTPN21Q16825 1174 aa17.04■□□□□ 0.32
USB1-215ENST00000569252 FIGNQ5HY92 759 aa17.04■□□□□ 0.32
USB1-215ENST00000569252 CRYBG2Q8N1P7 616 aa17.04■□□□□ 0.32
USB1-215ENST00000569252 EFHBQ8N7U6 833 aa17.04■□□□□ 0.32
USB1-215ENST00000569252 ZNF461Q8TAF7 563 aa17.04■□□□□ 0.32
USB1-215ENST00000569252 MYCBPAPQ8TBZ2 947 aa17.04■□□□□ 0.32
USB1-215ENST00000569252 CPLX3Q8WVH0 158 aa17.04■□□□□ 0.32
USB1-215ENST00000569252 KAT5Q92993 513 aa17.04■□□□□ 0.32
USB1-215ENST00000569252 MRFAP1L1Q96HT8 127 aa17.04■□□□□ 0.32
USB1-215ENST00000569252 KREMEN1Q96MU8 473 aa17.04■□□□□ 0.32
USB1-215ENST00000569252 NUCKS1Q9H1E3 243 aaKnown RBP17.04■□□□□ 0.32
USB1-215ENST00000569252 SMOC2Q9H3U7 446 aa17.04■□□□□ 0.32
USB1-215ENST00000569252 PCDHB5Q9Y5E4 795 aa17.04■□□□□ 0.32
USB1-215ENST00000569252 LOC730098B7Z3J9 87 aa17.03■□□□□ 0.32
USB1-215ENST00000569252 FOXN3O00409 490 aaPredicted RBP17.03■□□□□ 0.32
USB1-215ENST00000569252 PRRG1O14668 218 aa17.03■□□□□ 0.32
USB1-215ENST00000569252 MED7O43513 233 aa17.03■□□□□ 0.32
USB1-215ENST00000569252 NOL4O94818 638 aa17.03■□□□□ 0.32
USB1-215ENST00000569252 GLUD1P00367 558 aa17.03■□□□□ 0.32
USB1-215ENST00000569252 VDRP11473 427 aa17.03■□□□□ 0.32
USB1-215ENST00000569252 SGO2Q562F6 1265 aa17.03■□□□□ 0.32
USB1-215ENST00000569252 MDH1BQ5I0G3 518 aa17.03■□□□□ 0.32
USB1-215ENST00000569252 LLGL2Q6P1M3 1020 aa17.03■□□□□ 0.32
USB1-215ENST00000569252 VSTM4Q8IW00 320 aa17.03■□□□□ 0.32
USB1-215ENST00000569252 RBBP8NLQ8NC74 664 aaPredicted RBP17.03■□□□□ 0.32
USB1-215ENST00000569252 OR10T2Q8NGX3 314 aa17.03■□□□□ 0.32
USB1-215ENST00000569252 FEZF2Q8TBJ5 459 aa17.03■□□□□ 0.32
USB1-215ENST00000569252 SPPL2BQ8TCT7 592 aa17.03■□□□□ 0.32
USB1-215ENST00000569252 RTP3Q9BQQ7 232 aa17.03■□□□□ 0.32
USB1-215ENST00000569252 NAA15Q9BXJ9 866 aaKnown RBP17.03■□□□□ 0.32
USB1-215ENST00000569252 GANQ9H2C0 597 aa17.03■□□□□ 0.32
USB1-215ENST00000569252 PDCL3Q9H2J4 239 aa17.03■□□□□ 0.32
USB1-215ENST00000569252 MYO6Q9UM54 1294 aa17.03■□□□□ 0.32
USB1-215ENST00000569252 LUC7L2Q9Y383 392 aaKnown RBP17.03■□□□□ 0.32
USB1-215ENST00000569252 MYBPHLA2RUH7 354 aa17.02■□□□□ 0.32
USB1-215ENST00000569252 CLASP2O75122 1294 aaKnown RBP17.02■□□□□ 0.32
USB1-215ENST00000569252 ATP2C2O75185 946 aa17.02■□□□□ 0.32
USB1-215ENST00000569252 ADCY5O95622 1261 aa17.02■□□□□ 0.32
USB1-215ENST00000569252 OR4Q2P0C623 313 aa17.02■□□□□ 0.32
USB1-215ENST00000569252 ACO1P21399 889 aaKnown RBP17.02■□□□□ 0.32
USB1-215ENST00000569252 SOX5P35711 763 aa17.02■□□□□ 0.32
USB1-215ENST00000569252 PBX1P40424 430 aa17.02■□□□□ 0.32
USB1-215ENST00000569252 TUFMP49411 452 aaKnown RBP17.02■□□□□ 0.32
USB1-215ENST00000569252 RAD23BP54727 409 aa17.02■□□□□ 0.32
USB1-215ENST00000569252 ROR1Q01973 937 aa17.02■□□□□ 0.32
USB1-215ENST00000569252 ADCY1Q08828 1119 aa17.02■□□□□ 0.32
USB1-215ENST00000569252 ORC1Q13415 861 aa17.02■□□□□ 0.32
USB1-215ENST00000569252 STILQ15468 1287 aa17.02■□□□□ 0.32
USB1-215ENST00000569252 LIN9Q5TKA1 542 aa17.02■□□□□ 0.32
USB1-215ENST00000569252 FAM171BQ6P995 826 aa17.02■□□□□ 0.32
USB1-215ENST00000569252 RSPO2Q6UXX9 243 aaPredicted RBP17.02■□□□□ 0.32
USB1-215ENST00000569252 CCDC149Q6ZUS6 474 aa17.02■□□□□ 0.32
USB1-215ENST00000569252 TMC6Q7Z403 805 aa17.02■□□□□ 0.32
USB1-215ENST00000569252 SHC3Q92529 594 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms