RNA–Protein interactions for RNA: ENST00000568591.5

PKD1-235, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 2

Gene PKD1, Length 2,545 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-235ENST00000568591 BBS9Q3SYG4 887 aa19.25■□□□□ 0.67
PKD1-235ENST00000568591 LRRC6Q86X45 466 aa19.25■□□□□ 0.67
PKD1-235ENST00000568591 PCSK1NQ9UHG2 260 aa19.25■□□□□ 0.67
PKD1-235ENST00000568591 ZNF214Q9UL59 606 aaPredicted RBP19.25■□□□□ 0.67
PKD1-235ENST00000568591 KIF1CO43896 1103 aaKnown RBP19.24■□□□□ 0.67
PKD1-235ENST00000568591 RAP1GAPP47736 663 aa19.24■□□□□ 0.67
PKD1-235ENST00000568591 RAD23BP54727 409 aa19.24■□□□□ 0.67
PKD1-235ENST00000568591 ENPEPQ07075 957 aa19.24■□□□□ 0.67
PKD1-235ENST00000568591 CAPSQ13938 189 aa19.24■□□□□ 0.67
PKD1-235ENST00000568591 TMEM132BQ14DG7 1078 aa19.24■□□□□ 0.67
PKD1-235ENST00000568591 PTPN20Q4JDL3 420 aa19.24■□□□□ 0.67
PKD1-235ENST00000568591 DENND1BQ6P3S1 775 aa19.24■□□□□ 0.67
PKD1-235ENST00000568591 EP400NLQ6ZTU2 488 aa19.24■□□□□ 0.67
PKD1-235ENST00000568591 CDR2LQ86X02 465 aaPredicted RBP19.24■□□□□ 0.67
PKD1-235ENST00000568591 REPS2Q8NFH8 660 aa19.24■□□□□ 0.67
PKD1-235ENST00000568591 DHX33Q9H6R0 707 aaKnown RBP19.24■□□□□ 0.67
PKD1-235ENST00000568591 ZFP69BQ9UJL9 534 aa19.24■□□□□ 0.67
PKD1-235ENST00000568591 PSME4Q14997 1843 aa19.24■□□□□ 0.67
PKD1-235ENST00000568591 A0A0G2JND7 137 aa19.24■□□□□ 0.67
PKD1-235ENST00000568591 LRCH4O75427 683 aa19.24■□□□□ 0.67
PKD1-235ENST00000568591 DCTN3O75935 186 aa19.24■□□□□ 0.67
PKD1-235ENST00000568591 CALB1P05937 261 aa19.24■□□□□ 0.67
PKD1-235ENST00000568591 TPBGLP0DKB5 382 aa19.24■□□□□ 0.67
PKD1-235ENST00000568591 PSMA2P25787 234 aa19.24■□□□□ 0.67
PKD1-235ENST00000568591 SLC25A11Q02978 314 aaKnown RBP19.24■□□□□ 0.67
PKD1-235ENST00000568591 CLNKQ7Z7G1 428 aa19.24■□□□□ 0.67
PKD1-235ENST00000568591 NAT8LQ8N9F0 302 aa19.24■□□□□ 0.67
PKD1-235ENST00000568591 MICAL1Q8TDZ2 1067 aa19.24■□□□□ 0.67
PKD1-235ENST00000568591 NUDCD1Q96RS6 583 aa19.24■□□□□ 0.67
PKD1-235ENST00000568591 ARL2P36404 184 aa19.23■□□□□ 0.67
PKD1-235ENST00000568591 SLC18A1P54219 525 aa19.23■□□□□ 0.67
PKD1-235ENST00000568591 HMGCS2P54868 508 aa19.23■□□□□ 0.67
PKD1-235ENST00000568591 OSTNP61366 133 aa19.23■□□□□ 0.67
PKD1-235ENST00000568591 AGGF1Q8N302 714 aaeCLIP19.23■□□□□ 0.67
PKD1-235ENST00000568591 FAM71DQ8N9W8 422 aa19.23■□□□□ 0.67
PKD1-235ENST00000568591 TCHPQ9BT92 498 aa19.23■□□□□ 0.67
PKD1-235ENST00000568591 ZNF302Q9NR11 478 aa19.23■□□□□ 0.67
PKD1-235ENST00000568591 FBXO6Q9NRD1 293 aaPredicted RBP19.23■□□□□ 0.67
PKD1-235ENST00000568591 GINM1Q9NU53 330 aa19.23■□□□□ 0.67
PKD1-235ENST00000568591 CYP39A1Q9NYL5 469 aa19.23■□□□□ 0.67
PKD1-235ENST00000568591 SLC24A2Q9UI40 661 aa19.23■□□□□ 0.67
PKD1-235ENST00000568591 CHMP2BQ9UQN3 213 aa19.23■□□□□ 0.67
PKD1-235ENST00000568591 SNCAIPQ9Y6H5 919 aa19.23■□□□□ 0.67
PKD1-235ENST00000568591 OATP04181 439 aa19.23■□□□□ 0.67
PKD1-235ENST00000568591 CALB2P22676 271 aa19.23■□□□□ 0.67
PKD1-235ENST00000568591 ALDH3A1P30838 453 aa19.23■□□□□ 0.67
PKD1-235ENST00000568591 NAMPTP43490 491 aa19.23■□□□□ 0.67
PKD1-235ENST00000568591 RAB6CQ53S08 254 aa19.23■□□□□ 0.67
PKD1-235ENST00000568591 LRRC38Q5VT99 294 aa19.23■□□□□ 0.67
PKD1-235ENST00000568591 MTMR14Q8NCE2 650 aa19.23■□□□□ 0.67
PKD1-235ENST00000568591 DCAKDQ8WVC6 231 aa19.23■□□□□ 0.67
PKD1-235ENST00000568591 SPDL1Q96EA4 605 aa19.23■□□□□ 0.67
PKD1-235ENST00000568591 RAB6CQ9H0N0 254 aa19.23■□□□□ 0.67
PKD1-235ENST00000568591 SENP1Q9P0U3 644 aa19.23■□□□□ 0.67
PKD1-235ENST00000568591 POLIQ9UNA4 740 aa19.23■□□□□ 0.67
PKD1-235ENST00000568591 ATP2A1O14983 1001 aa19.22■□□□□ 0.67
PKD1-235ENST00000568591 FAM189A1O60320 539 aa19.22■□□□□ 0.67
PKD1-235ENST00000568591 WFS1O76024 890 aa19.22■□□□□ 0.67
PKD1-235ENST00000568591 NBPF12Q5TAG4 269 aaPredicted RBP19.22■□□□□ 0.67
PKD1-235ENST00000568591 TTLL6Q8N841 843 aa19.22■□□□□ 0.67
PKD1-235ENST00000568591 TMEM35BQ8NCS4 154 aa19.22■□□□□ 0.67
PKD1-235ENST00000568591 STK32AQ8WU08 396 aa19.22■□□□□ 0.67
PKD1-235ENST00000568591 IMPG2Q9BZV3 1241 aa19.22■□□□□ 0.67
PKD1-235ENST00000568591 TRIM6Q9C030 488 aaPredicted RBP19.22■□□□□ 0.67
PKD1-235ENST00000568591 SPATA31C2B4DYI2 1134 aa19.22■□□□□ 0.67
PKD1-235ENST00000568591 MAFGO15525 162 aa19.22■□□□□ 0.67
PKD1-235ENST00000568591 AVILO75366 819 aa19.22■□□□□ 0.67
PKD1-235ENST00000568591 PIGRP01833 764 aa19.22■□□□□ 0.67
PKD1-235ENST00000568591 BASP1P80723 227 aaKnown RBP19.22■□□□□ 0.67
PKD1-235ENST00000568591 CNTN2Q02246 1040 aa19.22■□□□□ 0.67
PKD1-235ENST00000568591 ADGRD1Q6QNK2 874 aa19.22■□□□□ 0.67
PKD1-235ENST00000568591 NPNTQ6UXI9 565 aa19.22■□□□□ 0.67
PKD1-235ENST00000568591 DSTYKQ6XUX3 929 aa19.22■□□□□ 0.67
PKD1-235ENST00000568591 CEP128Q6ZU80 1094 aa19.22■□□□□ 0.67
PKD1-235ENST00000568591 PPIL6Q8IXY8 311 aa19.22■□□□□ 0.67
PKD1-235ENST00000568591 LRRN4Q8WUT4 740 aa19.22■□□□□ 0.67
PKD1-235ENST00000568591 SLC7A3Q8WY07 619 aa19.22■□□□□ 0.67
PKD1-235ENST00000568591 INPP5DQ92835 1189 aa19.22■□□□□ 0.67
PKD1-235ENST00000568591 NAF1Q96HR8 494 aaKnown RBP19.22■□□□□ 0.67
PKD1-235ENST00000568591 SERAC1Q96JX3 654 aa19.22■□□□□ 0.67
PKD1-235ENST00000568591 ARL8BQ9NVJ2 186 aa19.22■□□□□ 0.67
PKD1-235ENST00000568591 COL11A1P12107 1806 aaPredicted RBP19.22■□□□□ 0.67
PKD1-235ENST00000568591 CFAP69A5D8W1 941 aa19.21■□□□□ 0.67
PKD1-235ENST00000568591 H0YCG3 227 aa19.21■□□□□ 0.67
PKD1-235ENST00000568591 DKC1O60832 514 aaKnown RBP eCLIP19.21■□□□□ 0.67
PKD1-235ENST00000568591 TFAMQ00059 246 aaKnown RBP19.21■□□□□ 0.67
PKD1-235ENST00000568591 PIGHQ14442 188 aaPredicted RBP19.21■□□□□ 0.67
PKD1-235ENST00000568591 SLFN12LQ6IEE8 588 aa19.21■□□□□ 0.67
PKD1-235ENST00000568591 BANPQ8N9N5 519 aa19.21■□□□□ 0.67
PKD1-235ENST00000568591 ACSS3Q9H6R3 686 aa19.21■□□□□ 0.67
PKD1-235ENST00000568591 NXF1Q9UBU9 619 aaKnown RBP19.21■□□□□ 0.67
PKD1-235ENST00000568591 MAFBQ9Y5Q3 323 aaPredicted RBP19.21■□□□□ 0.67
PKD1-235ENST00000568591 C2CD2LO14523 706 aa19.21■□□□□ 0.67
PKD1-235ENST00000568591 SMNDC1O75940 238 aaKnown RBP eCLIP19.21■□□□□ 0.675e-7■■■■□ 24.5
PKD1-235ENST00000568591 CD19P15391 556 aa19.21■□□□□ 0.67
PKD1-235ENST00000568591 CCNG1P51959 295 aa19.21■□□□□ 0.67
PKD1-235ENST00000568591 ARL4CP56559 192 aa19.21■□□□□ 0.67
PKD1-235ENST00000568591 SESN3P58005 492 aa19.21■□□□□ 0.67
PKD1-235ENST00000568591 KHDC1Q4VXA5 237 aaKnown RBP19.21■□□□□ 0.67
PKD1-235ENST00000568591 XRRA1Q6P2D8 792 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms