RNA–Protein interactions for RNA: ENST00000568294.5

HDGFL3-206, Transcript of HDGF like 3, humanhuman

TSL 4

Gene HDGFL3, Length 3,397 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-206ENST00000568294 MYBPC2Q14324 1141 aa9.41□□□□□ -0.9
HDGFL3-206ENST00000568294 KPNB1Q14974 876 aaKnown RBP9.41□□□□□ -0.9
HDGFL3-206ENST00000568294 PLEKHG4Q58EX7 1191 aa9.41□□□□□ -0.9
HDGFL3-206ENST00000568294 FAM102AQ5T9C2 384 aaPredicted RBP9.41□□□□□ -0.9
HDGFL3-206ENST00000568294 BBOF1Q8ND07 529 aa9.41□□□□□ -0.9
HDGFL3-206ENST00000568294 EXD1Q8NHP7 514 aa9.41□□□□□ -0.9
HDGFL3-206ENST00000568294 SPATA18Q8TC71 538 aa9.41□□□□□ -0.9
HDGFL3-206ENST00000568294 TMC2Q8TDI7 906 aa9.41□□□□□ -0.9
HDGFL3-206ENST00000568294 FAF2Q96CS3 445 aa9.41□□□□□ -0.9
HDGFL3-206ENST00000568294 CCDC124Q96CT7 223 aaKnown RBP9.41□□□□□ -0.9
HDGFL3-206ENST00000568294 FAM161BQ96MY7 647 aa9.41□□□□□ -0.9
HDGFL3-206ENST00000568294 DDX50Q9BQ39 737 aaKnown RBP9.41□□□□□ -0.9
HDGFL3-206ENST00000568294 ARHGEF3Q9NR81 526 aa9.41□□□□□ -0.9
HDGFL3-206ENST00000568294 ARL8BQ9NVJ2 186 aa9.41□□□□□ -0.9
HDGFL3-206ENST00000568294 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.41□□□□□ -0.9
HDGFL3-206ENST00000568294 HMGXB4Q9UGU5 601 aa9.41□□□□□ -0.9
HDGFL3-206ENST00000568294 CCDC78A2IDD5 438 aa9.4□□□□□ -0.9
HDGFL3-206ENST00000568294 KBTBD13C9JR72 458 aa9.4□□□□□ -0.9
HDGFL3-206ENST00000568294 H3BRJ5 948 aa9.4□□□□□ -0.9
HDGFL3-206ENST00000568294 WDR46O15213 610 aaKnown RBP9.4□□□□□ -0.9
HDGFL3-206ENST00000568294 UGT1A9O60656 530 aa9.4□□□□□ -0.9
HDGFL3-206ENST00000568294 RGS20O76081 388 aa9.4□□□□□ -0.9
HDGFL3-206ENST00000568294 HAUS5O94927 633 aa9.4□□□□□ -0.9
HDGFL3-206ENST00000568294 ALDH18A1P54886 795 aaKnown RBP9.4□□□□□ -0.9
HDGFL3-206ENST00000568294 CDH6P55285 790 aa9.4□□□□□ -0.9
HDGFL3-206ENST00000568294 ARL4CP56559 192 aa9.4□□□□□ -0.9
HDGFL3-206ENST00000568294 CAV1Q03135 178 aa9.4□□□□□ -0.9
HDGFL3-206ENST00000568294 PTK7Q13308 1070 aa9.4□□□□□ -0.9
HDGFL3-206ENST00000568294 KBTBD12Q3ZCT8 623 aa9.4□□□□□ -0.9
HDGFL3-206ENST00000568294 GALNTL6Q49A17 601 aa9.4□□□□□ -0.9
HDGFL3-206ENST00000568294 IGDCC3Q8IVU1 814 aa9.4□□□□□ -0.9
HDGFL3-206ENST00000568294 TMEM192Q8IY95 271 aa9.4□□□□□ -0.9
HDGFL3-206ENST00000568294 TMEM35BQ8NCS4 154 aa9.4□□□□□ -0.9
HDGFL3-206ENST00000568294 ARMC2Q8NEN0 867 aa9.4□□□□□ -0.9
HDGFL3-206ENST00000568294 VTI1AQ96AJ9 217 aa9.4□□□□□ -0.9
HDGFL3-206ENST00000568294 NAF1Q96HR8 494 aaKnown RBP9.4□□□□□ -0.9
HDGFL3-206ENST00000568294 PGLYRP2Q96PD5 576 aa9.4□□□□□ -0.9
HDGFL3-206ENST00000568294 TTC1Q99614 292 aa9.4□□□□□ -0.9
HDGFL3-206ENST00000568294 TMEM109Q9BVC6 243 aa9.4□□□□□ -0.9
HDGFL3-206ENST00000568294 UGT1A7Q9HAW7 530 aa9.4□□□□□ -0.9
HDGFL3-206ENST00000568294 UGT1A10Q9HAW8 530 aa9.4□□□□□ -0.9
HDGFL3-206ENST00000568294 UGT1A8Q9HAW9 530 aa9.4□□□□□ -0.9
HDGFL3-206ENST00000568294 PICK1Q9NRD5 415 aa9.4□□□□□ -0.9
HDGFL3-206ENST00000568294 RAB6BQ9NRW1 208 aa9.4□□□□□ -0.9
HDGFL3-206ENST00000568294 ANKEF1Q9NU02 776 aa9.4□□□□□ -0.9
HDGFL3-206ENST00000568294 PACSIN3Q9UKS6 424 aa9.4□□□□□ -0.9
HDGFL3-206ENST00000568294 ATRNL1Q5VV63 1379 aa9.4□□□□□ -0.9
HDGFL3-206ENST00000568294 M0QYV0 167 aa9.4□□□□□ -0.9
HDGFL3-206ENST00000568294 APRTP07741 180 aa9.4□□□□□ -0.9
HDGFL3-206ENST00000568294 UBTFL6P0CB48 400 aaPredicted RBP9.4□□□□□ -0.9
HDGFL3-206ENST00000568294 ACO1P21399 889 aaKnown RBP9.4□□□□□ -0.9
HDGFL3-206ENST00000568294 RPL22P35268 128 aaKnown RBP9.4□□□□□ -0.9
HDGFL3-206ENST00000568294 TUBP50607 506 aa9.4□□□□□ -0.9
HDGFL3-206ENST00000568294 ARFIP2P53365 341 aa9.4□□□□□ -0.9
HDGFL3-206ENST00000568294 VCPP55072 806 aaKnown RBP9.4□□□□□ -0.9
HDGFL3-206ENST00000568294 GEMIN4P57678 1058 aaKnown RBP9.4□□□□□ -0.9
HDGFL3-206ENST00000568294 CRADDP78560 199 aa9.4□□□□□ -0.9
HDGFL3-206ENST00000568294 AMHR2Q16671 573 aa9.4□□□□□ -0.9
HDGFL3-206ENST00000568294 TFDP3Q5H9I0 405 aa9.4□□□□□ -0.9
HDGFL3-206ENST00000568294 OR6B2Q6IFH4 312 aa9.4□□□□□ -0.9
HDGFL3-206ENST00000568294 TLDC1Q6P9B6 456 aa9.4□□□□□ -0.9
HDGFL3-206ENST00000568294 CRELD2Q6UXH1 353 aaPredicted RBP9.4□□□□□ -0.9
HDGFL3-206ENST00000568294 NCAPG2Q86XI2 1143 aa9.4□□□□□ -0.9
HDGFL3-206ENST00000568294 KATNAL2Q8IYT4 538 aa9.4□□□□□ -0.9
HDGFL3-206ENST00000568294 ALLCQ8N6M5 410 aa9.4□□□□□ -0.9
HDGFL3-206ENST00000568294 CFAP61Q8NHU2 1237 aa9.4□□□□□ -0.9
HDGFL3-206ENST00000568294 STMN2Q93045 179 aa9.4□□□□□ -0.9
HDGFL3-206ENST00000568294 TSSK1BQ9BXA7 367 aa9.4□□□□□ -0.9
HDGFL3-206ENST00000568294 MIS12Q9H081 205 aa9.4□□□□□ -0.9
HDGFL3-206ENST00000568294 ZCWPW1Q9H0M4 648 aa9.4□□□□□ -0.9
HDGFL3-206ENST00000568294 CCDC134Q9H6E4 229 aa9.4□□□□□ -0.9
HDGFL3-206ENST00000568294 MYOZ2Q9NPC6 264 aa9.4□□□□□ -0.9
HDGFL3-206ENST00000568294 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.4□□□□□ -0.9
HDGFL3-206ENST00000568294 PCMTD2Q9NV79 361 aa9.4□□□□□ -0.9
HDGFL3-206ENST00000568294 WNK3Q9BYP7 1800 aa9.4□□□□□ -0.9
HDGFL3-206ENST00000568294 CLUHO75153 1309 aa9.4□□□□□ -0.91
HDGFL3-206ENST00000568294 hCG_1818297A0A087WSY0 165 aa9.4□□□□□ -0.91
HDGFL3-206ENST00000568294 EDF1O60869 148 aaKnown RBP9.4□□□□□ -0.91
HDGFL3-206ENST00000568294 CYP1A1P04798 512 aaPredicted RBP9.4□□□□□ -0.91
HDGFL3-206ENST00000568294 MYL2P10916 166 aa9.4□□□□□ -0.91
HDGFL3-206ENST00000568294 ESRRAP11474 423 aaPredicted RBP9.4□□□□□ -0.91
HDGFL3-206ENST00000568294 DPEP1P16444 411 aa9.4□□□□□ -0.91
HDGFL3-206ENST00000568294 RASSF2P50749 326 aa9.4□□□□□ -0.91
HDGFL3-206ENST00000568294 ATXN3P54252 364 aaPredicted RBP9.4□□□□□ -0.91
HDGFL3-206ENST00000568294 TMPRSS15P98073 1019 aa9.4□□□□□ -0.91
HDGFL3-206ENST00000568294 PTPN20Q4JDL3 420 aa9.4□□□□□ -0.91
HDGFL3-206ENST00000568294 KHDC1Q4VXA5 237 aaKnown RBP9.4□□□□□ -0.91
HDGFL3-206ENST00000568294 ARID3BQ8IVW6 561 aaPredicted RBP9.4□□□□□ -0.91
HDGFL3-206ENST00000568294 C12orf56Q8IXR9 622 aa9.4□□□□□ -0.91
HDGFL3-206ENST00000568294 RCOR2Q8IZ40 523 aa9.4□□□□□ -0.91
HDGFL3-206ENST00000568294 PDIK1LQ8N165 341 aa9.4□□□□□ -0.91
HDGFL3-206ENST00000568294 NSUN6Q8TEA1 469 aaKnown RBP9.4□□□□□ -0.91
HDGFL3-206ENST00000568294 UCMAQ8WVF2 138 aa9.4□□□□□ -0.91
HDGFL3-206ENST00000568294 PRPF31Q8WWY3 499 aaKnown RBP9.4□□□□□ -0.91
HDGFL3-206ENST00000568294 FAM81BQ96LP2 452 aa9.4□□□□□ -0.91
HDGFL3-206ENST00000568294 TMEM120AQ9BXJ8 343 aa9.4□□□□□ -0.91
HDGFL3-206ENST00000568294 DLGAP2Q9P1A6 1054 aa9.4□□□□□ -0.91
HDGFL3-206ENST00000568294 COQ4Q9Y3A0 265 aa9.4□□□□□ -0.91
HDGFL3-206ENST00000568294 SPDYE5A6NIY4 337 aa9.39□□□□□ -0.91
HDGFL3-206ENST00000568294 TOM1L1O75674 476 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms