RNA–Protein interactions for RNA: ENST00000568239.1

SMG1-215, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 2,978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-215ENST00000568239 PODXLO00592 558 aa7.46□□□□□ -1.22
SMG1-215ENST00000568239 TTI1O43156 1089 aa7.46□□□□□ -1.22
SMG1-215ENST00000568239 B3GAT3O94766 335 aa7.46□□□□□ -1.22
SMG1-215ENST00000568239 TCF4P15884 667 aa7.46□□□□□ -1.22
SMG1-215ENST00000568239 CTNNA2P26232 953 aa7.46□□□□□ -1.22
SMG1-215ENST00000568239 OGDHQ02218 1023 aa7.46□□□□□ -1.22
SMG1-215ENST00000568239 MTFR1Q15390 333 aa7.46□□□□□ -1.22
SMG1-215ENST00000568239 ATP13A4Q4VNC1 1196 aa7.46□□□□□ -1.22
SMG1-215ENST00000568239 WSCD1Q658N2 575 aa7.46□□□□□ -1.22
SMG1-215ENST00000568239 CCNI2Q6ZMN8 369 aaPredicted RBP7.46□□□□□ -1.22
SMG1-215ENST00000568239 UNC93AQ86WB7 457 aa7.46□□□□□ -1.22
SMG1-215ENST00000568239 XYLT1Q86Y38 959 aa7.46□□□□□ -1.22
SMG1-215ENST00000568239 IFT20Q8IY31 132 aa7.46□□□□□ -1.22
SMG1-215ENST00000568239 CCDC26Q8TAB7 109 aa7.46□□□□□ -1.22
SMG1-215ENST00000568239 JOSD2Q8TAC2 188 aa7.46□□□□□ -1.22
SMG1-215ENST00000568239 KBTBD7Q8WVZ9 684 aa7.46□□□□□ -1.22
SMG1-215ENST00000568239 MAGOHBQ96A72 148 aaKnown RBP7.46□□□□□ -1.22
SMG1-215ENST00000568239 RNF25Q96BH1 459 aaPredicted RBP7.46□□□□□ -1.22
SMG1-215ENST00000568239 ACSF2Q96CM8 615 aaPredicted RBP7.46□□□□□ -1.22
SMG1-215ENST00000568239 TSEN34Q9BSV6 310 aaKnown RBP7.46□□□□□ -1.22
SMG1-215ENST00000568239 RNF208Q9H0X6 261 aa7.46□□□□□ -1.22
SMG1-215ENST00000568239 MTUS1Q9ULD2 1270 aa7.46□□□□□ -1.22
SMG1-215ENST00000568239 GIT1Q9Y2X7 761 aa7.46□□□□□ -1.22
SMG1-215ENST00000568239 PI4K2BG5E9Z4 385 aa7.45□□□□□ -1.22
SMG1-215ENST00000568239 I3L4J1 428 aa7.45□□□□□ -1.22
SMG1-215ENST00000568239 ARVCFO00192 962 aa7.45□□□□□ -1.22
SMG1-215ENST00000568239 ATP2C2O75185 946 aa7.45□□□□□ -1.22
SMG1-215ENST00000568239 ZRANB2O95218 330 aaKnown RBP eCLIP7.45□□□□□ -1.22
SMG1-215ENST00000568239 RAB27AP51159 221 aa7.45□□□□□ -1.22
SMG1-215ENST00000568239 ATN1P54259 1190 aaPredicted RBP7.45□□□□□ -1.22
SMG1-215ENST00000568239 PRMT2P55345 433 aa7.45□□□□□ -1.22
SMG1-215ENST00000568239 STILQ15468 1287 aa7.45□□□□□ -1.22
SMG1-215ENST00000568239 TRADDQ15628 312 aa7.45□□□□□ -1.22
SMG1-215ENST00000568239 CCDC142Q17RM4 750 aa7.45□□□□□ -1.22
SMG1-215ENST00000568239 SMTNL2Q2TAL5 461 aa7.45□□□□□ -1.22
SMG1-215ENST00000568239 KAZNQ674X7 775 aa7.45□□□□□ -1.22
SMG1-215ENST00000568239 PMF1Q6P1K2 205 aa7.45□□□□□ -1.22
SMG1-215ENST00000568239 MAATS1Q7Z4T9 603 aa7.45□□□□□ -1.22
SMG1-215ENST00000568239 TTC30AQ86WT1 665 aa7.45□□□□□ -1.22
SMG1-215ENST00000568239 SLC13A5Q86YT5 568 aaPredicted RBP7.45□□□□□ -1.22
SMG1-215ENST00000568239 SCUBE3Q8IX30 993 aa7.45□□□□□ -1.22
SMG1-215ENST00000568239 SLC2A14Q8TDB8 520 aa7.45□□□□□ -1.22
SMG1-215ENST00000568239 HNRNPLLQ8WVV9 542 aaKnown RBP7.45□□□□□ -1.22
SMG1-215ENST00000568239 TNIP3Q96KP6 325 aa7.45□□□□□ -1.22
SMG1-215ENST00000568239 SENP8Q96LD8 212 aa7.45□□□□□ -1.22
SMG1-215ENST00000568239 TSPAN18Q96SJ8 248 aa7.45□□□□□ -1.22
SMG1-215ENST00000568239 DNAI2Q9GZS0 605 aa7.45□□□□□ -1.22
SMG1-215ENST00000568239 ZWILCHQ9H900 591 aa7.45□□□□□ -1.22
SMG1-215ENST00000568239 GDAP2Q9NXN4 497 aa7.45□□□□□ -1.22
SMG1-215ENST00000568239 WDR35Q9P2L0 1181 aa7.45□□□□□ -1.22
SMG1-215ENST00000568239 TTC7AQ9ULT0 858 aaPredicted RBP7.45□□□□□ -1.22
SMG1-215ENST00000568239 NFU1Q9UMS0 254 aa7.45□□□□□ -1.22
SMG1-215ENST00000568239 SIGLEC16A6NMB1 481 aa7.45□□□□□ -1.22
SMG1-215ENST00000568239 PQBP1O60828 265 aaKnown RBP7.45□□□□□ -1.22
SMG1-215ENST00000568239 SASH3O75995 380 aa7.45□□□□□ -1.22
SMG1-215ENST00000568239 LRPAP1P30533 357 aa7.45□□□□□ -1.22
SMG1-215ENST00000568239 CARSP49589 748 aaKnown RBP7.45□□□□□ -1.22
SMG1-215ENST00000568239 CBX1P83916 185 aa7.45□□□□□ -1.22
SMG1-215ENST00000568239 TAP1Q03518 808 aa7.45□□□□□ -1.22
SMG1-215ENST00000568239 ZNF252P-AS1Q0IIN9 211 aa7.45□□□□□ -1.22
SMG1-215ENST00000568239 SNX1Q13596 522 aa7.45□□□□□ -1.22
SMG1-215ENST00000568239 PIGHQ14442 188 aaPredicted RBP7.45□□□□□ -1.22
SMG1-215ENST00000568239 CLUL1Q15846 466 aa7.45□□□□□ -1.22
SMG1-215ENST00000568239 CDO1Q16878 200 aa7.45□□□□□ -1.22
SMG1-215ENST00000568239 TRIM71Q2Q1W2 868 aaKnown RBP7.45□□□□□ -1.22
SMG1-215ENST00000568239 KCNT1Q5JUK3 1230 aa7.45□□□□□ -1.22
SMG1-215ENST00000568239 CCDC105Q8IYK2 499 aa7.45□□□□□ -1.22
SMG1-215ENST00000568239 C3orf58Q8NDZ4 430 aa7.45□□□□□ -1.22
SMG1-215ENST00000568239 PGBD4Q96DM1 585 aa7.45□□□□□ -1.22
SMG1-215ENST00000568239 DPH5Q9H2P9 285 aa7.45□□□□□ -1.22
SMG1-215ENST00000568239 DDX43Q9NXZ2 648 aaKnown RBP7.45□□□□□ -1.22
SMG1-215ENST00000568239 PCSK1NQ9UHG2 260 aa7.45□□□□□ -1.22
SMG1-215ENST00000568239 PTPN22Q9Y2R2 807 aa7.45□□□□□ -1.22
SMG1-215ENST00000568239 KIAA0100Q14667 2235 aaKnown RBP7.45□□□□□ -1.22
SMG1-215ENST00000568239 TCRBV5S1A1TA0A578 114 aa7.44□□□□□ -1.22
SMG1-215ENST00000568239 CLDN5O00501 218 aa7.44□□□□□ -1.22
SMG1-215ENST00000568239 KRT1P04264 644 aa7.44□□□□□ -1.22
SMG1-215ENST00000568239 PFKMP08237 780 aa7.44□□□□□ -1.22
SMG1-215ENST00000568239 RALAP11233 206 aa7.44□□□□□ -1.22
SMG1-215ENST00000568239 LCP1P13796 627 aa7.44□□□□□ -1.22
SMG1-215ENST00000568239 DR1Q01658 176 aa7.44□□□□□ -1.22
SMG1-215ENST00000568239 ZNF268Q14587 947 aaPredicted RBP7.44□□□□□ -1.22
SMG1-215ENST00000568239 FAM183BPQ6ZVS7 135 aa7.44□□□□□ -1.22
SMG1-215ENST00000568239 SND1Q7KZF4 910 aaKnown RBP eCLIP7.44□□□□□ -1.22
SMG1-215ENST00000568239 HDXQ7Z353 690 aa7.44□□□□□ -1.22
SMG1-215ENST00000568239 OSTM1Q86WC4 334 aa7.44□□□□□ -1.22
SMG1-215ENST00000568239 DDX42Q86XP3 938 aaKnown RBP eCLIP7.44□□□□□ -1.22
SMG1-215ENST00000568239 B3GALNT2Q8NCR0 500 aa7.44□□□□□ -1.22
SMG1-215ENST00000568239 C1orf54Q8WWF1 131 aa7.44□□□□□ -1.22
SMG1-215ENST00000568239 DDX27Q96GQ7 796 aaKnown RBP7.44□□□□□ -1.22
SMG1-215ENST00000568239 PIWIL1Q96J94 861 aaKnown RBP7.44□□□□□ -1.22
SMG1-215ENST00000568239 FAM118BQ9BPY3 351 aa7.44□□□□□ -1.22
SMG1-215ENST00000568239 TRIM51Q9BSJ1 452 aa7.44□□□□□ -1.22
SMG1-215ENST00000568239 MED10Q9BTT4 135 aa7.44□□□□□ -1.22
SMG1-215ENST00000568239 FUT8Q9BYC5 575 aa7.44□□□□□ -1.22
SMG1-215ENST00000568239 B3GNT5Q9BYG0 378 aa7.44□□□□□ -1.22
SMG1-215ENST00000568239 FAM124BQ9H5Z6 455 aaPredicted RBP7.44□□□□□ -1.22
SMG1-215ENST00000568239 SAGE1Q9NXZ1 904 aa7.44□□□□□ -1.22
SMG1-215ENST00000568239 LRRD1A4D1F6 860 aa7.44□□□□□ -1.22
SMG1-215ENST00000568239 PSTPIP1O43586 416 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms