RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 GNAZP19086 355 aa11.39□□□□□ -0.59
PALB2-206ENST00000568219 KCNA4P22459 653 aa11.39□□□□□ -0.59
PALB2-206ENST00000568219 SESN2P58004 480 aaPredicted RBP11.39□□□□□ -0.59
PALB2-206ENST00000568219 MRPS9P82933 396 aaKnown RBP11.39□□□□□ -0.59
PALB2-206ENST00000568219 CCDC15Q0P6D6 951 aa11.39□□□□□ -0.59
PALB2-206ENST00000568219 BST1Q10588 318 aa11.39□□□□□ -0.59
PALB2-206ENST00000568219 ACVR2BQ13705 512 aa11.39□□□□□ -0.59
PALB2-206ENST00000568219 SEC14L1Q92503 715 aa11.39□□□□□ -0.59
PALB2-206ENST00000568219 MRPL46Q9H2W6 279 aaKnown RBP11.39□□□□□ -0.59
PALB2-206ENST00000568219 AAASQ9NRG9 546 aa11.39□□□□□ -0.59
PALB2-206ENST00000568219 DOLKQ9UPQ8 538 aa11.39□□□□□ -0.59
PALB2-206ENST00000568219 MRPL11Q9Y3B7 192 aaKnown RBP11.39□□□□□ -0.59
PALB2-206ENST00000568219 A8MXQ7 604 aa11.39□□□□□ -0.59
PALB2-206ENST00000568219 KCNN4O15554 427 aa11.39□□□□□ -0.59
PALB2-206ENST00000568219 FAM155BO75949 473 aa11.39□□□□□ -0.59
PALB2-206ENST00000568219 SNRPAP09012 282 aaKnown RBP11.39□□□□□ -0.59
PALB2-206ENST00000568219 SRGAP2CP0DJJ0 459 aa11.39□□□□□ -0.59
PALB2-206ENST00000568219 SRGAP2BP0DMP2 458 aa11.39□□□□□ -0.59
PALB2-206ENST00000568219 POLR2BP30876 1174 aaKnown RBP11.39□□□□□ -0.59
PALB2-206ENST00000568219 HOXD13P35453 343 aa11.39□□□□□ -0.59
PALB2-206ENST00000568219 NUDT2P50583 147 aa11.39□□□□□ -0.59
PALB2-206ENST00000568219 MAPK10P53779 464 aa11.39□□□□□ -0.59
PALB2-206ENST00000568219 NFIAQ12857 509 aa11.39□□□□□ -0.59
PALB2-206ENST00000568219 SHROOM1Q2M3G4 852 aaPredicted RBP11.39□□□□□ -0.59
PALB2-206ENST00000568219 LRRC8BQ6P9F7 803 aa11.39□□□□□ -0.59
PALB2-206ENST00000568219 PPIL6Q8IXY8 311 aa11.39□□□□□ -0.59
PALB2-206ENST00000568219 ARL10Q8N8L6 244 aa11.39□□□□□ -0.59
PALB2-206ENST00000568219 FEZF2Q8TBJ5 459 aa11.39□□□□□ -0.59
PALB2-206ENST00000568219 MIPEPQ99797 713 aa11.39□□□□□ -0.59
PALB2-206ENST00000568219 DNAAF2Q9NVR5 837 aaKnown RBP11.39□□□□□ -0.59
PALB2-206ENST00000568219 BCAP29Q9UHQ4 241 aa11.39□□□□□ -0.59
PALB2-206ENST00000568219 SLC24A2Q9UI40 661 aa11.39□□□□□ -0.59
PALB2-206ENST00000568219 SOX13Q9UN79 622 aa11.39□□□□□ -0.59
PALB2-206ENST00000568219 COMMD3-BMI1R4GMX3 469 aa11.39□□□□□ -0.59
PALB2-206ENST00000568219 ADGRA3Q8IWK6 1321 aa11.39□□□□□ -0.59
PALB2-206ENST00000568219 CLRN2A0PK11 232 aa11.38□□□□□ -0.59
PALB2-206ENST00000568219 ZBBXA8MT70 800 aa11.38□□□□□ -0.59
PALB2-206ENST00000568219 ABLIM1O14639 778 aa11.38□□□□□ -0.59
PALB2-206ENST00000568219 AVILO75366 819 aa11.38□□□□□ -0.59
PALB2-206ENST00000568219 GYS1P13807 737 aa11.38□□□□□ -0.59
PALB2-206ENST00000568219 ATP2B4P23634 1241 aa11.38□□□□□ -0.59
PALB2-206ENST00000568219 TYK2P29597 1187 aa11.38□□□□□ -0.59
PALB2-206ENST00000568219 CIITAP33076 1130 aa11.38□□□□□ -0.59
PALB2-206ENST00000568219 CDH6P55285 790 aa11.38□□□□□ -0.59
PALB2-206ENST00000568219 NCOA4Q13772 614 aa11.38□□□□□ -0.59
PALB2-206ENST00000568219 C11orf91Q3C1V1 193 aa11.38□□□□□ -0.59
PALB2-206ENST00000568219 CGB2Q6NT52 195 aa11.38□□□□□ -0.59
PALB2-206ENST00000568219 EMC1Q8N766 993 aa11.38□□□□□ -0.59
PALB2-206ENST00000568219 CCNYQ8ND76 341 aa11.38□□□□□ -0.59
PALB2-206ENST00000568219 RBM17Q96I25 401 aaKnown RBP11.38□□□□□ -0.59
PALB2-206ENST00000568219 CRAMP1Q96RY5 1269 aa11.38□□□□□ -0.59
PALB2-206ENST00000568219 CSRNP1Q96S65 589 aa11.38□□□□□ -0.59
PALB2-206ENST00000568219 SERPINI1Q99574 410 aa11.38□□□□□ -0.59
PALB2-206ENST00000568219 RTFDC1Q9BY42 306 aaPredicted RBP11.38□□□□□ -0.59
PALB2-206ENST00000568219 PPM1HQ9ULR3 514 aa11.38□□□□□ -0.59
PALB2-206ENST00000568219 PCDHA2Q9Y5H9 948 aa11.38□□□□□ -0.59
PALB2-206ENST00000568219 DCXO43602 365 aa11.38□□□□□ -0.59
PALB2-206ENST00000568219 PSMC1P62191 440 aaKnown RBP11.38□□□□□ -0.59
PALB2-206ENST00000568219 RPL7AP62424 266 aaKnown RBP11.38□□□□□ -0.59
PALB2-206ENST00000568219 OCRLQ01968 901 aa11.38□□□□□ -0.59
PALB2-206ENST00000568219 NRF1Q16656 503 aa11.38□□□□□ -0.59
PALB2-206ENST00000568219 Q4G0T1 1027 aa11.38□□□□□ -0.59
PALB2-206ENST00000568219 TMEM35BQ8NCS4 154 aa11.38□□□□□ -0.59
PALB2-206ENST00000568219 PDZD8Q8NEN9 1154 aa11.38□□□□□ -0.59
PALB2-206ENST00000568219 CDKL2Q92772 493 aa11.38□□□□□ -0.59
PALB2-206ENST00000568219 TXLNGYQ9BZA5 131 aa11.38□□□□□ -0.59
PALB2-206ENST00000568219 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.38□□□□□ -0.59
PALB2-206ENST00000568219 EPS15L1Q9UBC2 864 aa11.38□□□□□ -0.59
PALB2-206ENST00000568219 DISP2A7MBM2 1401 aa11.38□□□□□ -0.59
PALB2-206ENST00000568219 KBTBD13C9JR72 458 aa11.38□□□□□ -0.59
PALB2-206ENST00000568219 TPST1O60507 370 aa11.38□□□□□ -0.59
PALB2-206ENST00000568219 T-ENOLP0DO92 83 aa11.38□□□□□ -0.59
PALB2-206ENST00000568219 SMARCA1P28370 1054 aa11.38□□□□□ -0.59
PALB2-206ENST00000568219 QARSP47897 775 aaKnown RBP11.38□□□□□ -0.59
PALB2-206ENST00000568219 ORC1Q13415 861 aa11.38□□□□□ -0.59
PALB2-206ENST00000568219 GRAPQ13588 217 aa11.38□□□□□ -0.59
PALB2-206ENST00000568219 FLOT2Q14254 428 aa11.38□□□□□ -0.59
PALB2-206ENST00000568219 MORF4L2Q15014 288 aa11.38□□□□□ -0.59
PALB2-206ENST00000568219 IL31Q6EBC2 164 aa11.38□□□□□ -0.59
PALB2-206ENST00000568219 GRAPLQ8TC17 118 aaPredicted RBP11.38□□□□□ -0.59
PALB2-206ENST00000568219 KREMEN1Q96MU8 473 aa11.38□□□□□ -0.59
PALB2-206ENST00000568219 CATSPER2Q96P56 530 aa11.38□□□□□ -0.59
PALB2-206ENST00000568219 MAN1C1Q9NR34 630 aa11.38□□□□□ -0.59
PALB2-206ENST00000568219 SH3BP1Q9Y3L3 701 aa11.38□□□□□ -0.59
PALB2-206ENST00000568219 ZMYM2Q9UBW7 1377 aa11.38□□□□□ -0.59
PALB2-206ENST00000568219 GPR75-ASB3A0A0A6YYF3 556 aa11.37□□□□□ -0.59
PALB2-206ENST00000568219 GPC4O75487 556 aa11.37□□□□□ -0.59
PALB2-206ENST00000568219 GLRA2P23416 452 aa11.37□□□□□ -0.59
PALB2-206ENST00000568219 MRPS22P82650 360 aaKnown RBP11.37□□□□□ -0.59
PALB2-206ENST00000568219 CDC16Q13042 620 aa11.37□□□□□ -0.59
PALB2-206ENST00000568219 CLEC16AQ2KHT3 1053 aa11.37□□□□□ -0.59
PALB2-206ENST00000568219 ANKRD20A4Q4UJ75 823 aa11.37□□□□□ -0.59
PALB2-206ENST00000568219 LAYNQ6UX15 382 aa11.37□□□□□ -0.59
PALB2-206ENST00000568219 SESTD1Q86VW0 696 aa11.37□□□□□ -0.59
PALB2-206ENST00000568219 CCNYL1Q8N7R7 359 aa11.37□□□□□ -0.59
PALB2-206ENST00000568219 ZSCAN18Q8TBC5 510 aaPredicted RBP11.37□□□□□ -0.59
PALB2-206ENST00000568219 CHURC1Q8WUH1 139 aa11.37□□□□□ -0.59
PALB2-206ENST00000568219 LENG1Q96BZ8 264 aaPredicted RBP11.37□□□□□ -0.59
PALB2-206ENST00000568219 PGBD4Q96DM1 585 aa11.37□□□□□ -0.59
PALB2-206ENST00000568219 UNC45AQ9H3U1 944 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms