RNA–Protein interactions for RNA: ENST00000567992.1

CLK3-220, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 603 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-220ENST00000567992 UNC93AQ86WB7 457 aa10.45□□□□□ -0.74
CLK3-220ENST00000567992 SPATA2LQ8IUW3 424 aaPredicted RBP10.45□□□□□ -0.74
CLK3-220ENST00000567992 PLCD3Q8N3E9 789 aa10.45□□□□□ -0.74
CLK3-220ENST00000567992 UBR7Q8N806 425 aa10.45□□□□□ -0.74
CLK3-220ENST00000567992 SHKBP1Q8TBC3 707 aa10.45□□□□□ -0.74
CLK3-220ENST00000567992 GPR152Q8TDT2 470 aa10.45□□□□□ -0.74
CLK3-220ENST00000567992 ING5Q8WYH8 240 aa10.45□□□□□ -0.74
CLK3-220ENST00000567992 TATDN2Q93075 761 aa10.45□□□□□ -0.74
CLK3-220ENST00000567992 ACSF2Q96CM8 615 aaPredicted RBP10.45□□□□□ -0.74
CLK3-220ENST00000567992 FAXDC2Q96IV6 333 aa10.45□□□□□ -0.74
CLK3-220ENST00000567992 ZNF512Q96ME7 567 aaPredicted RBP10.45□□□□□ -0.74
CLK3-220ENST00000567992 B3GNT5Q9BYG0 378 aa10.45□□□□□ -0.74
CLK3-220ENST00000567992 IMPG2Q9BZV3 1241 aa10.45□□□□□ -0.74
CLK3-220ENST00000567992 ZNF518BQ9C0D4 1074 aa10.45□□□□□ -0.74
CLK3-220ENST00000567992 SMOC2Q9H3U7 446 aa10.45□□□□□ -0.74
CLK3-220ENST00000567992 EPHX3Q9H6B9 360 aa10.45□□□□□ -0.74
CLK3-220ENST00000567992 CYP3A43Q9HB55 503 aa10.45□□□□□ -0.74
CLK3-220ENST00000567992 C11orf16Q9NQ32 467 aa10.45□□□□□ -0.74
CLK3-220ENST00000567992 ASAH2Q9NR71 780 aa10.45□□□□□ -0.74
CLK3-220ENST00000567992 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.45□□□□□ -0.74
CLK3-220ENST00000567992 LIMD1Q9UGP4 676 aa10.45□□□□□ -0.74
CLK3-220ENST00000567992 CDH7Q9ULB5 785 aa10.45□□□□□ -0.74
CLK3-220ENST00000567992 MRPS23Q9Y3D9 190 aaKnown RBP10.45□□□□□ -0.74
CLK3-220ENST00000567992 ASB3Q9Y575 518 aa10.45□□□□□ -0.74
CLK3-220ENST00000567992 TECTAO75443 2155 aa10.45□□□□□ -0.74
CLK3-220ENST00000567992 ANAPC1Q9H1A4 1944 aa10.45□□□□□ -0.74
CLK3-220ENST00000567992 KIF26AQ9ULI4 1882 aaPredicted RBP10.44□□□□□ -0.74
CLK3-220ENST00000567992 COL4A2P08572 1712 aa10.44□□□□□ -0.74
CLK3-220ENST00000567992 P4HA2O15460 535 aa10.44□□□□□ -0.74
CLK3-220ENST00000567992 DCXO43602 365 aa10.44□□□□□ -0.74
CLK3-220ENST00000567992 TADA3O75528 432 aa10.44□□□□□ -0.74
CLK3-220ENST00000567992 NOL4O94818 638 aa10.44□□□□□ -0.74
CLK3-220ENST00000567992 FGFR1OPO95684 399 aaKnown RBP10.44□□□□□ -0.74
CLK3-220ENST00000567992 AFPP02771 609 aaKnown RBP10.44□□□□□ -0.74
CLK3-220ENST00000567992 CCDC192P0DO97 292 aa10.44□□□□□ -0.74
CLK3-220ENST00000567992 MYL4P12829 197 aa10.44□□□□□ -0.74
CLK3-220ENST00000567992 GJA1P17302 382 aa10.44□□□□□ -0.74
CLK3-220ENST00000567992 CD58P19256 250 aa10.44□□□□□ -0.74
CLK3-220ENST00000567992 KCNA4P22459 653 aa10.44□□□□□ -0.74
CLK3-220ENST00000567992 BDNFP23560 247 aa10.44□□□□□ -0.74
CLK3-220ENST00000567992 FCARP24071 287 aa10.44□□□□□ -0.74
CLK3-220ENST00000567992 CYP27A1Q02318 531 aa10.44□□□□□ -0.74
CLK3-220ENST00000567992 KCNH2Q12809 1159 aa10.44□□□□□ -0.74
CLK3-220ENST00000567992 MTMR3Q13615 1198 aa10.44□□□□□ -0.74
CLK3-220ENST00000567992 MAPRE1Q15691 268 aaKnown RBP10.44□□□□□ -0.74
CLK3-220ENST00000567992 DDR2Q16832 855 aa10.44□□□□□ -0.74
CLK3-220ENST00000567992 CT47A1Q5JQC4 288 aaPredicted RBP10.44□□□□□ -0.74
CLK3-220ENST00000567992 IQCEQ6IPM2 695 aa10.44□□□□□ -0.74
CLK3-220ENST00000567992 GAREM2Q75VX8 874 aa10.44□□□□□ -0.74
CLK3-220ENST00000567992 PDZD4Q76G19 769 aaPredicted RBP10.44□□□□□ -0.74
CLK3-220ENST00000567992 TMEM150AQ86TG1 271 aa10.44□□□□□ -0.74
CLK3-220ENST00000567992 ACOT1Q86TX2 421 aa10.44□□□□□ -0.74
CLK3-220ENST00000567992 FUKQ8N0W3 1084 aa10.44□□□□□ -0.74
CLK3-220ENST00000567992 CRYBG2Q8N1P7 616 aa10.44□□□□□ -0.74
CLK3-220ENST00000567992 ELMOD1Q8N336 334 aa10.44□□□□□ -0.74
CLK3-220ENST00000567992 LEMD2Q8NC56 503 aa10.44□□□□□ -0.74
CLK3-220ENST00000567992 GIPC2Q8TF65 315 aa10.44□□□□□ -0.74
CLK3-220ENST00000567992 ELOVL4Q9GZR5 314 aa10.44□□□□□ -0.74
CLK3-220ENST00000567992 THAP9Q9H5L6 903 aa10.44□□□□□ -0.74
CLK3-220ENST00000567992 KCNK12Q9HB15 430 aa10.44□□□□□ -0.74
CLK3-220ENST00000567992 MAGEC2Q9UBF1 373 aaPredicted RBP10.44□□□□□ -0.74
CLK3-220ENST00000567992 DACH1Q9UI36 760 aa10.44□□□□□ -0.74
CLK3-220ENST00000567992 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.44□□□□□ -0.74
CLK3-220ENST00000567992 ZFP37Q9Y6Q3 630 aaPredicted RBP10.44□□□□□ -0.74
CLK3-220ENST00000567992 NCANO14594 1321 aa10.43□□□□□ -0.74
CLK3-220ENST00000567992 A0A1W2PRU2 124 aa10.43□□□□□ -0.74
CLK3-220ENST00000567992 SLC38A8A6NNN8 435 aa10.43□□□□□ -0.74
CLK3-220ENST00000567992 CLDN5O00501 218 aa10.43□□□□□ -0.74
CLK3-220ENST00000567992 CCDC130P13994 396 aa10.43□□□□□ -0.74
CLK3-220ENST00000567992 ACO1P21399 889 aaKnown RBP10.43□□□□□ -0.74
CLK3-220ENST00000567992 RPL10AP62906 217 aaKnown RBP10.43□□□□□ -0.74
CLK3-220ENST00000567992 CUL2Q13617 745 aa10.43□□□□□ -0.74
CLK3-220ENST00000567992 TEAD2Q15562 447 aa10.43□□□□□ -0.74
CLK3-220ENST00000567992 STX1AQ16623 288 aa10.43□□□□□ -0.74
CLK3-220ENST00000567992 STXBP5Q5T5C0 1151 aa10.43□□□□□ -0.74
CLK3-220ENST00000567992 CYP4A22Q5TCH4 519 aa10.43□□□□□ -0.74
CLK3-220ENST00000567992 CAVIN1Q6NZI2 390 aaKnown RBP10.43□□□□□ -0.74
CLK3-220ENST00000567992 PARM1Q6UWI2 310 aa10.43□□□□□ -0.74
CLK3-220ENST00000567992 VSTM1Q6UX27 236 aa10.43□□□□□ -0.74
CLK3-220ENST00000567992 ITIH5Q86UX2 942 aa10.43□□□□□ -0.74
CLK3-220ENST00000567992 FAM35AQ86V20 835 aa10.43□□□□□ -0.74
CLK3-220ENST00000567992 C12orf29Q8N999 325 aa10.43□□□□□ -0.74
CLK3-220ENST00000567992 CCDC150Q8NCX0 1101 aa10.43□□□□□ -0.74
CLK3-220ENST00000567992 ST13P5Q8NFI4 369 aaPredicted RBP10.43□□□□□ -0.74
CLK3-220ENST00000567992 ENOX1Q8TC92 643 aaKnown RBP10.43□□□□□ -0.74
CLK3-220ENST00000567992 RSAD2Q8WXG1 361 aa10.43□□□□□ -0.74
CLK3-220ENST00000567992 FGF14Q92915 247 aa10.43□□□□□ -0.74
CLK3-220ENST00000567992 MCRS1Q96EZ8 462 aa10.43□□□□□ -0.74
CLK3-220ENST00000567992 TRMT2BQ96GJ1 504 aaKnown RBP10.43□□□□□ -0.74
CLK3-220ENST00000567992 TNIP3Q96KP6 325 aa10.43□□□□□ -0.74
CLK3-220ENST00000567992 SPATA17Q96L03 361 aa10.43□□□□□ -0.74
CLK3-220ENST00000567992 MYRFLQ96LU7 910 aa10.43□□□□□ -0.74
CLK3-220ENST00000567992 ZSWIM3Q96MP5 696 aa10.43□□□□□ -0.74
CLK3-220ENST00000567992 FAM124BQ9H5Z6 455 aaPredicted RBP10.43□□□□□ -0.74
CLK3-220ENST00000567992 CISHQ9NSE2 258 aa10.43□□□□□ -0.74
CLK3-220ENST00000567992 SAMSN1Q9NSI8 373 aaKnown RBP10.43□□□□□ -0.74
CLK3-220ENST00000567992 GDE1Q9NZC3 331 aa10.43□□□□□ -0.74
CLK3-220ENST00000567992 SORCS3Q9UPU3 1222 aa10.43□□□□□ -0.74
CLK3-220ENST00000567992 NUMBLQ9Y6R0 609 aa10.43□□□□□ -0.74
CLK3-220ENST00000567992 HELZP42694 1942 aaKnown RBP10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms