RNA–Protein interactions for RNA: ENST00000567399.5

COMMD4-219, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 976 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-219ENST00000567399 DDR2Q16832 855 aa16.13■□□□□ 0.17
COMMD4-219ENST00000567399 GET4Q7L5D6 327 aaPredicted RBP16.13■□□□□ 0.17
COMMD4-219ENST00000567399 OTOP3Q7RTS5 596 aa16.13■□□□□ 0.17
COMMD4-219ENST00000567399 ADHFE1Q8IWW8 467 aa16.13■□□□□ 0.17
COMMD4-219ENST00000567399 FEZF2Q8TBJ5 459 aa16.13■□□□□ 0.17
COMMD4-219ENST00000567399 UHRF1Q96T88 793 aaPredicted RBP16.13■□□□□ 0.17
COMMD4-219ENST00000567399 ELOVL4Q9GZR5 314 aa16.13■□□□□ 0.17
COMMD4-219ENST00000567399 UBE2TQ9NPD8 197 aaPredicted RBP16.13■□□□□ 0.17
COMMD4-219ENST00000567399 ASAH2Q9NR71 780 aa16.13■□□□□ 0.17
COMMD4-219ENST00000567399 MRPS23Q9Y3D9 190 aaKnown RBP16.13■□□□□ 0.17
COMMD4-219ENST00000567399 ASB3Q9Y575 518 aa16.13■□□□□ 0.17
COMMD4-219ENST00000567399 NME7Q9Y5B8 376 aa16.13■□□□□ 0.17
COMMD4-219ENST00000567399 PCDHB4Q9Y5E5 795 aa16.13■□□□□ 0.17
COMMD4-219ENST00000567399 GOLGA6L19H0YKK7 550 aa16.12■□□□□ 0.17
COMMD4-219ENST00000567399 TRIM66O15016 1216 aa16.12■□□□□ 0.17
COMMD4-219ENST00000567399 CILPO75339 1184 aa16.12■□□□□ 0.17
COMMD4-219ENST00000567399 CAVIN2O95810 425 aa16.12■□□□□ 0.17
COMMD4-219ENST00000567399 RHOP08100 348 aa16.12■□□□□ 0.17
COMMD4-219ENST00000567399 INCA1Q0VD86 236 aa16.12■□□□□ 0.17
COMMD4-219ENST00000567399 KRT31Q15323 416 aa16.12■□□□□ 0.17
COMMD4-219ENST00000567399 CCDC142Q17RM4 750 aa16.12■□□□□ 0.17
COMMD4-219ENST00000567399 CFAP221Q4G0U5 840 aa16.12■□□□□ 0.17
COMMD4-219ENST00000567399 CDKAL1Q5VV42 579 aa16.12■□□□□ 0.17
COMMD4-219ENST00000567399 VSTM1Q6UX27 236 aa16.12■□□□□ 0.17
COMMD4-219ENST00000567399 DNAJB7Q7Z6W7 309 aaPredicted RBP16.12■□□□□ 0.17
COMMD4-219ENST00000567399 CRYBG2Q8N1P7 616 aa16.12■□□□□ 0.17
COMMD4-219ENST00000567399 TDRD5Q8NAT2 981 aaKnown RBP16.12■□□□□ 0.17
COMMD4-219ENST00000567399 GPR152Q8TDT2 470 aa16.12■□□□□ 0.17
COMMD4-219ENST00000567399 TMEM176AQ96HP8 235 aa16.12■□□□□ 0.17
COMMD4-219ENST00000567399 FAM81BQ96LP2 452 aa16.12■□□□□ 0.17
COMMD4-219ENST00000567399 PCMTD1Q96MG8 357 aaPredicted RBP16.12■□□□□ 0.17
COMMD4-219ENST00000567399 GCNAQ96QF7 691 aa16.12■□□□□ 0.17
COMMD4-219ENST00000567399 PKMYT1Q99640 499 aa16.12■□□□□ 0.17
COMMD4-219ENST00000567399 ARID3AQ99856 593 aa16.12■□□□□ 0.17
COMMD4-219ENST00000567399 FUCA2Q9BTY2 467 aa16.12■□□□□ 0.17
COMMD4-219ENST00000567399 B3GNT5Q9BYG0 378 aa16.12■□□□□ 0.17
COMMD4-219ENST00000567399 FAM124BQ9H5Z6 455 aaPredicted RBP16.12■□□□□ 0.17
COMMD4-219ENST00000567399 FAM49BQ9NUQ9 324 aa16.12■□□□□ 0.17
COMMD4-219ENST00000567399 CEP72Q9P209 647 aa16.12■□□□□ 0.17
COMMD4-219ENST00000567399 HMGXB4Q9UGU5 601 aa16.12■□□□□ 0.17
COMMD4-219ENST00000567399 MAGED2Q9UNF1 606 aaPredicted RBP16.12■□□□□ 0.17
COMMD4-219ENST00000567399 MTCL1Q9Y4B5 1905 aaKnown RBP16.11■□□□□ 0.17
COMMD4-219ENST00000567399 GTPBP10A4D1E9 387 aaKnown RBP16.11■□□□□ 0.17
COMMD4-219ENST00000567399 CLDN5O00501 218 aa16.11■□□□□ 0.17
COMMD4-219ENST00000567399 KRT5P13647 590 aa16.11■□□□□ 0.17
COMMD4-219ENST00000567399 CCDC130P13994 396 aa16.11■□□□□ 0.17
COMMD4-219ENST00000567399 CD19P15391 556 aa16.11■□□□□ 0.17
COMMD4-219ENST00000567399 SLC9A1P19634 815 aa16.11■□□□□ 0.17
COMMD4-219ENST00000567399 ADORA2BP29275 332 aa16.11■□□□□ 0.17
COMMD4-219ENST00000567399 MAGEA11P43364 429 aa16.11■□□□□ 0.17
COMMD4-219ENST00000567399 GPR15P49685 360 aa16.11■□□□□ 0.17
COMMD4-219ENST00000567399 MFAP3P55082 362 aa16.11■□□□□ 0.17
COMMD4-219ENST00000567399 SDHAF4Q5VUM1 108 aa16.11■□□□□ 0.17
COMMD4-219ENST00000567399 TRIM65Q6PJ69 517 aa16.11■□□□□ 0.17
COMMD4-219ENST00000567399 TMEM270Q6UE05 265 aa16.11■□□□□ 0.17
COMMD4-219ENST00000567399 ARHGEF19Q8IW93 802 aa16.11■□□□□ 0.17
COMMD4-219ENST00000567399 HS6ST3Q8IZP7 471 aa16.11■□□□□ 0.17
COMMD4-219ENST00000567399 PLCD3Q8N3E9 789 aa16.11■□□□□ 0.17
COMMD4-219ENST00000567399 C12orf29Q8N999 325 aa16.11■□□□□ 0.17
COMMD4-219ENST00000567399 LEMD2Q8NC56 503 aa16.11■□□□□ 0.17
COMMD4-219ENST00000567399 LMO3Q8TAP4 145 aa16.11■□□□□ 0.17
COMMD4-219ENST00000567399 CYFIP2Q96F07 1278 aa16.11■□□□□ 0.17
COMMD4-219ENST00000567399 NECAB3Q96P71 396 aaPredicted RBP16.11■□□□□ 0.17
COMMD4-219ENST00000567399 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.11■□□□□ 0.172e-7■■□□□ 14.4
COMMD4-219ENST00000567399 FGF19O95750 216 aa16.1■□□□□ 0.17
COMMD4-219ENST00000567399 CSH1P0DML2 217 aa16.1■□□□□ 0.17
COMMD4-219ENST00000567399 CSH2P0DML3 217 aa16.1■□□□□ 0.17
COMMD4-219ENST00000567399 PON1P27169 355 aa16.1■□□□□ 0.17
COMMD4-219ENST00000567399 USP8P40818 1118 aa16.1■□□□□ 0.17
COMMD4-219ENST00000567399 COPB1P53618 953 aaKnown RBP16.1■□□□□ 0.17
COMMD4-219ENST00000567399 GCNT1Q02742 428 aa16.1■□□□□ 0.17
COMMD4-219ENST00000567399 NCAPHQ15003 741 aa16.1■□□□□ 0.17
COMMD4-219ENST00000567399 ARHGAP44Q17R89 818 aa16.1■□□□□ 0.17
COMMD4-219ENST00000567399 FILIP1LQ4L180 1135 aa16.1■□□□□ 0.17
COMMD4-219ENST00000567399 MIIPQ5JXC2 388 aa16.1■□□□□ 0.17
COMMD4-219ENST00000567399 PHLDB3Q6NSJ2 640 aa16.1■□□□□ 0.17
COMMD4-219ENST00000567399 ENOSF1Q7L5Y1 443 aa16.1■□□□□ 0.17
COMMD4-219ENST00000567399 DHX40Q8IX18 779 aaKnown RBP16.1■□□□□ 0.17
COMMD4-219ENST00000567399 GJD3Q8N144 294 aa16.1■□□□□ 0.17
COMMD4-219ENST00000567399 SLC2A14Q8TDB8 520 aa16.1■□□□□ 0.17
COMMD4-219ENST00000567399 PSMG2Q969U7 264 aa16.1■□□□□ 0.17
COMMD4-219ENST00000567399 SMARCD1Q96GM5 515 aa16.1■□□□□ 0.17
COMMD4-219ENST00000567399 TWNKQ96RR1 684 aa16.1■□□□□ 0.17
COMMD4-219ENST00000567399 ZNF518BQ9C0D4 1074 aa16.1■□□□□ 0.17
COMMD4-219ENST00000567399 USTQ9Y2C2 406 aa16.1■□□□□ 0.17
COMMD4-219ENST00000567399 SLC38A8A6NNN8 435 aa16.09■□□□□ 0.17
COMMD4-219ENST00000567399 AP1G2O75843 785 aa16.09■□□□□ 0.17
COMMD4-219ENST00000567399 PAPLNO95428 1278 aa16.09■□□□□ 0.17
COMMD4-219ENST00000567399 FAM200BP0CF97 657 aa16.09■□□□□ 0.17
COMMD4-219ENST00000567399 ATF6P18850 670 aa16.09■□□□□ 0.17
COMMD4-219ENST00000567399 RAD23BP54727 409 aa16.09■□□□□ 0.17
COMMD4-219ENST00000567399 SLC8A3P57103 927 aa16.09■□□□□ 0.17
COMMD4-219ENST00000567399 UBXN1Q04323 297 aa16.09■□□□□ 0.17
COMMD4-219ENST00000567399 ZP2Q05996 745 aa16.09■□□□□ 0.17
COMMD4-219ENST00000567399 IFRD2Q12894 506 aaPredicted RBP16.09■□□□□ 0.17
COMMD4-219ENST00000567399 FAM35AQ86V20 835 aa16.09■□□□□ 0.17
COMMD4-219ENST00000567399 ITFG1Q8TB96 612 aa16.09■□□□□ 0.17
COMMD4-219ENST00000567399 WHAMMQ8TF30 809 aa16.09■□□□□ 0.17
COMMD4-219ENST00000567399 ING5Q8WYH8 240 aa16.09■□□□□ 0.17
COMMD4-219ENST00000567399 ATXN3LQ9H3M9 355 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms