RNA–Protein interactions for RNA: ENST00000567003.1

PALB2-205, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-205ENST00000567003 L1RE1Q9UN81 338 aa16.68■□□□□ 0.26
PALB2-205ENST00000567003 THADAQ6YHU6 1953 aa16.68■□□□□ 0.26
PALB2-205ENST00000567003 C1QTNF9BB2RNN3 333 aa16.67■□□□□ 0.26
PALB2-205ENST00000567003 APBB3O95704 486 aa16.67■□□□□ 0.26
PALB2-205ENST00000567003 C1QTNF9P0C862 333 aa16.67■□□□□ 0.26
PALB2-205ENST00000567003 POLR2BP30876 1174 aaKnown RBP16.67■□□□□ 0.26
PALB2-205ENST00000567003 NOVA1P51513 510 aaKnown RBP16.67■□□□□ 0.26
PALB2-205ENST00000567003 TSPY1Q01534 308 aa16.67■□□□□ 0.26
PALB2-205ENST00000567003 PDGFRLQ15198 375 aa16.67■□□□□ 0.26
PALB2-205ENST00000567003 ELF2Q15723 593 aa16.67■□□□□ 0.26
PALB2-205ENST00000567003 ZNF77Q15935 545 aa16.67■□□□□ 0.26
PALB2-205ENST00000567003 SV2CQ496J9 727 aa16.67■□□□□ 0.26
PALB2-205ENST00000567003 ARL6IP4Q66PJ3 421 aaKnown RBP16.67■□□□□ 0.26
PALB2-205ENST00000567003 PDCL2Q8N4E4 241 aa16.67■□□□□ 0.26
PALB2-205ENST00000567003 CPA6Q8N4T0 437 aa16.67■□□□□ 0.26
PALB2-205ENST00000567003 CD101Q93033 1021 aa16.67■□□□□ 0.26
PALB2-205ENST00000567003 TPSD1Q9BZJ3 242 aa16.67■□□□□ 0.26
PALB2-205ENST00000567003 CCSER1Q9C0I3 900 aa16.67■□□□□ 0.26
PALB2-205ENST00000567003 DUS2Q9NX74 493 aaKnown RBP16.67■□□□□ 0.26
PALB2-205ENST00000567003 ZMYM5Q9UJ78 669 aa16.67■□□□□ 0.26
PALB2-205ENST00000567003 BCLAF3A2AJT9 711 aaKnown RBP16.66■□□□□ 0.26
PALB2-205ENST00000567003 CAVIN2O95810 425 aa16.66■□□□□ 0.26
PALB2-205ENST00000567003 TOP3BO95985 862 aaKnown RBP16.66■□□□□ 0.26
PALB2-205ENST00000567003 CSH1P0DML2 217 aa16.66■□□□□ 0.26
PALB2-205ENST00000567003 CSH2P0DML3 217 aa16.66■□□□□ 0.26
PALB2-205ENST00000567003 ADSSP30520 456 aa16.66■□□□□ 0.26
PALB2-205ENST00000567003 GBP1P32455 592 aa16.66■□□□□ 0.26
PALB2-205ENST00000567003 UBA7P41226 1012 aa16.66■□□□□ 0.26
PALB2-205ENST00000567003 ATRXP46100 2492 aa16.66■□□□□ 0.26
PALB2-205ENST00000567003 IFNAR2P48551 515 aa16.66■□□□□ 0.26
PALB2-205ENST00000567003 DGKEP52429 567 aa16.66■□□□□ 0.26
PALB2-205ENST00000567003 SEC13P55735 322 aa16.66■□□□□ 0.26
PALB2-205ENST00000567003 SMARCB1Q12824 385 aa16.66■□□□□ 0.26
PALB2-205ENST00000567003 FOXC1Q12948 553 aa16.66■□□□□ 0.26
PALB2-205ENST00000567003 USP4Q13107 963 aa16.66■□□□□ 0.26
PALB2-205ENST00000567003 ZNF268Q14587 947 aaPredicted RBP16.66■□□□□ 0.26
PALB2-205ENST00000567003 EML3Q32P44 896 aa16.66■□□□□ 0.26
PALB2-205ENST00000567003 SYT13Q7L8C5 426 aa16.66■□□□□ 0.26
PALB2-205ENST00000567003 RASSF8Q8NHQ8 419 aa16.66■□□□□ 0.26
PALB2-205ENST00000567003 OSCP1Q8WVF1 389 aa16.66■□□□□ 0.26
PALB2-205ENST00000567003 POMGNT1Q8WZA1 660 aa16.66■□□□□ 0.26
PALB2-205ENST00000567003 ZNF560Q96MR9 790 aa16.66■□□□□ 0.26
PALB2-205ENST00000567003 DDX43Q9NXZ2 648 aaKnown RBP16.66■□□□□ 0.26
PALB2-205ENST00000567003 BAHCC1Q9P281 2608 aa16.66■□□□□ 0.26
PALB2-205ENST00000567003 STYXL1Q9Y6J8 313 aa16.66■□□□□ 0.26
PALB2-205ENST00000567003 HELZP42694 1942 aaKnown RBP16.66■□□□□ 0.26
PALB2-205ENST00000567003 LNP1A1A4G5 178 aa16.65■□□□□ 0.26
PALB2-205ENST00000567003 C2orf78A6NCI8 922 aa16.65■□□□□ 0.26
PALB2-205ENST00000567003 PATE3B3GLJ2 98 aa16.65■□□□□ 0.26
PALB2-205ENST00000567003 NOL4O94818 638 aa16.65■□□□□ 0.26
PALB2-205ENST00000567003 RHOBTB1O94844 696 aa16.65■□□□□ 0.26
PALB2-205ENST00000567003 ITGB3P05106 788 aa16.65■□□□□ 0.26
PALB2-205ENST00000567003 CKMP06732 381 aa16.65■□□□□ 0.26
PALB2-205ENST00000567003 PROS1P07225 676 aa16.65■□□□□ 0.26
PALB2-205ENST00000567003 BCKDHBP21953 392 aa16.65■□□□□ 0.26
PALB2-205ENST00000567003 TFAMQ00059 246 aaKnown RBP16.65■□□□□ 0.26
PALB2-205ENST00000567003 AMPD2Q01433 879 aa16.65■□□□□ 0.26
PALB2-205ENST00000567003 FAM160A1Q05DH4 1040 aa16.65■□□□□ 0.26
PALB2-205ENST00000567003 KCNA1Q09470 495 aa16.65■□□□□ 0.26
PALB2-205ENST00000567003 ZNF252P-AS1Q0IIN9 211 aa16.65■□□□□ 0.26
PALB2-205ENST00000567003 INTS6LQ5JSJ4 861 aaKnown RBP16.65■□□□□ 0.26
PALB2-205ENST00000567003 SFR1Q86XK3 245 aa16.65■□□□□ 0.26
PALB2-205ENST00000567003 ARL14EPQ8N8R7 260 aaPredicted RBP16.65■□□□□ 0.26
PALB2-205ENST00000567003 SAAL1Q96ER3 474 aa16.65■□□□□ 0.26
PALB2-205ENST00000567003 AK8Q96MA6 479 aa16.65■□□□□ 0.26
PALB2-205ENST00000567003 PKMYT1Q99640 499 aa16.65■□□□□ 0.26
PALB2-205ENST00000567003 LINC00597Q9H2U6 94 aa16.65■□□□□ 0.26
PALB2-205ENST00000567003 GTF3C4Q9UKN8 822 aa16.65■□□□□ 0.26
PALB2-205ENST00000567003 AGAP1Q9UPQ3 857 aa16.65■□□□□ 0.26
PALB2-205ENST00000567003 TRAV19A0A0A6YYK7 116 aa16.64■□□□□ 0.25
PALB2-205ENST00000567003 H3BQV1 296 aa16.64■□□□□ 0.25
PALB2-205ENST00000567003 NEFLP07196 543 aa16.64■□□□□ 0.25
PALB2-205ENST00000567003 SCP2P22307 547 aa16.64■□□□□ 0.25
PALB2-205ENST00000567003 NFE2Q16621 373 aaPredicted RBP16.64■□□□□ 0.25
PALB2-205ENST00000567003 FBXO43Q4G163 708 aa16.64■□□□□ 0.25
PALB2-205ENST00000567003 SH3PXD2AQ5TCZ1 1133 aa16.64■□□□□ 0.25
PALB2-205ENST00000567003 SLFN12LQ6IEE8 588 aa16.64■□□□□ 0.25
PALB2-205ENST00000567003 DYMQ7RTS9 669 aa16.64■□□□□ 0.25
PALB2-205ENST00000567003 SCN4BQ8IWT1 228 aa16.64■□□□□ 0.25
PALB2-205ENST00000567003 C1orf127Q8N9H9 656 aa16.64■□□□□ 0.25
PALB2-205ENST00000567003 TSTD1Q8NFU3 115 aa16.64■□□□□ 0.25
PALB2-205ENST00000567003 SH3RF2Q8TEC5 729 aa16.64■□□□□ 0.25
PALB2-205ENST00000567003 ACDQ96AP0 544 aa16.64■□□□□ 0.25
PALB2-205ENST00000567003 FAM213AQ9BRX8 229 aa16.64■□□□□ 0.25
PALB2-205ENST00000567003 TBC1D7Q9P0N9 293 aa16.64■□□□□ 0.25
PALB2-205ENST00000567003 EBF1Q9UH73 591 aa16.64■□□□□ 0.25
PALB2-205ENST00000567003 PTPRDP23468 1912 aa16.64■□□□□ 0.25
PALB2-205ENST00000567003 ASCC3Q8N3C0 2202 aaKnown RBP16.64■□□□□ 0.25
PALB2-205ENST00000567003 SLC26A4O43511 780 aa16.63■□□□□ 0.25
PALB2-205ENST00000567003 IL18RAPO95256 599 aa16.63■□□□□ 0.25
PALB2-205ENST00000567003 USP17L7P0C7H9 530 aa16.63■□□□□ 0.25
PALB2-205ENST00000567003 GJB2P29033 226 aa16.63■□□□□ 0.25
PALB2-205ENST00000567003 RPL10AP62906 217 aaKnown RBP16.63■□□□□ 0.25
PALB2-205ENST00000567003 C2orf27AQ580R0 203 aa16.63■□□□□ 0.25
PALB2-205ENST00000567003 PMS2CLQ68D20 193 aa16.63■□□□□ 0.25
PALB2-205ENST00000567003 ANO7Q6IWH7 933 aa16.63■□□□□ 0.25
PALB2-205ENST00000567003 UNQ6494/PRO21346Q6UXR6 183 aa16.63■□□□□ 0.25
PALB2-205ENST00000567003 TTC30AQ86WT1 665 aa16.63■□□□□ 0.25
PALB2-205ENST00000567003 SFTPA1Q8IWL2 248 aa16.63■□□□□ 0.25
PALB2-205ENST00000567003 CCDC33Q8N5R6 958 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms