RNA–Protein interactions for RNA: ENST00000566600.1

NME3-209, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-209ENST00000566600 CDR1P51861 262 aa27.81■■■□□ 2.04
NME3-209ENST00000566600 GCNT1Q02742 428 aa27.81■■■□□ 2.04
NME3-209ENST00000566600 CCDC142Q17RM4 750 aa27.81■■■□□ 2.04
NME3-209ENST00000566600 MIIPQ5JXC2 388 aa27.81■■■□□ 2.04
NME3-209ENST00000566600 CYP4A22Q5TCH4 519 aa27.81■■■□□ 2.04
NME3-209ENST00000566600 PPM1KQ8N3J5 372 aa27.81■■■□□ 2.04
NME3-209ENST00000566600 FAM81BQ96LP2 452 aa27.81■■■□□ 2.04
NME3-209ENST00000566600 UHRF1Q96T88 793 aaPredicted RBP27.81■■■□□ 2.04
NME3-209ENST00000566600 ARID3AQ99856 593 aa27.81■■■□□ 2.04
NME3-209ENST00000566600 CORO1BQ9BR76 489 aa27.81■■■□□ 2.04
NME3-209ENST00000566600 ELOVL4Q9GZR5 314 aa27.81■■■□□ 2.04
NME3-209ENST00000566600 HCFC1R1Q9NWW0 138 aa27.81■■■□□ 2.04
NME3-209ENST00000566600 HMGXB4Q9UGU5 601 aa27.81■■■□□ 2.04
NME3-209ENST00000566600 DENND4AQ7Z401 1863 aa27.81■■■□□ 2.04
NME3-209ENST00000566600 PES1O00541 588 aaKnown RBP27.8■■■□□ 2.04
NME3-209ENST00000566600 SOAT2O75908 522 aa27.8■■■□□ 2.04
NME3-209ENST00000566600 RHOP08100 348 aa27.8■■■□□ 2.04
NME3-209ENST00000566600 CDK11BP21127 795 aaKnown RBP27.8■■■□□ 2.04
NME3-209ENST00000566600 NCAPHQ15003 741 aa27.8■■■□□ 2.04
NME3-209ENST00000566600 TAF12Q16514 161 aa27.8■■■□□ 2.04
NME3-209ENST00000566600 PSMG2Q969U7 264 aa27.8■■■□□ 2.04
NME3-209ENST00000566600 ACSF2Q96CM8 615 aaPredicted RBP27.8■■■□□ 2.04
NME3-209ENST00000566600 RPGRIP1Q96KN7 1286 aa27.8■■■□□ 2.04
NME3-209ENST00000566600 CEP295NLQ96MC4 621 aa27.8■■■□□ 2.04
NME3-209ENST00000566600 CRACR2AQ9BSW2 395 aa27.8■■■□□ 2.04
NME3-209ENST00000566600 ASAH2Q9NR71 780 aa27.8■■■□□ 2.04
NME3-209ENST00000566600 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP27.8■■■□□ 2.041e-9■■■■■ 33.5
NME3-209ENST00000566600 C19orf67A6NJJ6 358 aa27.79■■■□□ 2.04
NME3-209ENST00000566600 ZNF197O14709 1029 aa27.79■■■□□ 2.04
NME3-209ENST00000566600 ATF6P18850 670 aa27.79■■■□□ 2.04
NME3-209ENST00000566600 BDNFP23560 247 aa27.79■■■□□ 2.04
NME3-209ENST00000566600 KRT31Q15323 416 aa27.79■■■□□ 2.04
NME3-209ENST00000566600 TRIM65Q6PJ69 517 aa27.79■■■□□ 2.04
NME3-209ENST00000566600 PDZD4Q76G19 769 aaPredicted RBP27.79■■■□□ 2.04
NME3-209ENST00000566600 WHAMMQ8TF30 809 aa27.79■■■□□ 2.04
NME3-209ENST00000566600 JAKMIP2Q96AA8 810 aa27.79■■■□□ 2.04
NME3-209ENST00000566600 LPIN3Q9BQK8 851 aa27.79■■■□□ 2.04
NME3-209ENST00000566600 MED10Q9BTT4 135 aa27.79■■■□□ 2.04
NME3-209ENST00000566600 B3GNT5Q9BYG0 378 aa27.79■■■□□ 2.04
NME3-209ENST00000566600 BECN2A8MW95 431 aa27.78■■■□□ 2.04
NME3-209ENST00000566600 LOC730098B7Z3J9 87 aa27.78■■■□□ 2.04
NME3-209ENST00000566600 TRIM66O15016 1216 aa27.78■■■□□ 2.04
NME3-209ENST00000566600 FGF19O95750 216 aa27.78■■■□□ 2.04
NME3-209ENST00000566600 ZNF18P17022 549 aa27.78■■■□□ 2.04
NME3-209ENST00000566600 ANXA13P27216 316 aa27.78■■■□□ 2.04
NME3-209ENST00000566600 GRIK1P39086 918 aa27.78■■■□□ 2.04
NME3-209ENST00000566600 EPHA5P54756 1037 aa27.78■■■□□ 2.04
NME3-209ENST00000566600 NTHL1P78549 312 aa27.78■■■□□ 2.04
NME3-209ENST00000566600 ORC1Q13415 861 aa27.78■■■□□ 2.04
NME3-209ENST00000566600 ENOSF1Q7L5Y1 443 aa27.78■■■□□ 2.04
NME3-209ENST00000566600 DNAJB7Q7Z6W7 309 aaPredicted RBP27.78■■■□□ 2.04
NME3-209ENST00000566600 SCN4BQ8IWT1 228 aa27.78■■■□□ 2.04
NME3-209ENST00000566600 PLCD3Q8N3E9 789 aa27.78■■■□□ 2.04
NME3-209ENST00000566600 TDRD5Q8NAT2 981 aaKnown RBP27.78■■■□□ 2.04
NME3-209ENST00000566600 TWNKQ96RR1 684 aa27.78■■■□□ 2.04
NME3-209ENST00000566600 TAB2Q9NYJ8 693 aa27.78■■■□□ 2.04
NME3-209ENST00000566600 LIMA1Q9UHB6 759 aaKnown RBP27.78■■■□□ 2.04
NME3-209ENST00000566600 MRPS23Q9Y3D9 190 aaKnown RBP27.78■■■□□ 2.04
NME3-209ENST00000566600 ZFP37Q9Y6Q3 630 aaPredicted RBP27.78■■■□□ 2.04
NME3-209ENST00000566600 MICAL2O94851 1124 aa27.77■■■□□ 2.04
NME3-209ENST00000566600 CSH1P0DML2 217 aa27.77■■■□□ 2.04
NME3-209ENST00000566600 CSH2P0DML3 217 aa27.77■■■□□ 2.04
NME3-209ENST00000566600 DDR2Q16832 855 aa27.77■■■□□ 2.04
NME3-209ENST00000566600 DHX40Q8IX18 779 aaKnown RBP27.77■■■□□ 2.04
NME3-209ENST00000566600 SMARCD1Q96GM5 515 aa27.77■■■□□ 2.04
NME3-209ENST00000566600 TMEM176AQ96HP8 235 aa27.77■■■□□ 2.04
NME3-209ENST00000566600 ZNF518BQ9C0D4 1074 aa27.77■■■□□ 2.04
NME3-209ENST00000566600 SLC9A1P19634 815 aa27.76■■■□□ 2.03
NME3-209ENST00000566600 PON1P27169 355 aa27.76■■■□□ 2.03
NME3-209ENST00000566600 GBP2P32456 591 aaPredicted RBP27.76■■■□□ 2.03
NME3-209ENST00000566600 SSTR3P32745 418 aaPredicted RBP27.76■■■□□ 2.03
NME3-209ENST00000566600 ZNF394Q53GI3 561 aa27.76■■■□□ 2.03
NME3-209ENST00000566600 PHLDB3Q6NSJ2 640 aa27.76■■■□□ 2.03
NME3-209ENST00000566600 RRAGAQ7L523 313 aa27.76■■■□□ 2.03
NME3-209ENST00000566600 GET4Q7L5D6 327 aaPredicted RBP27.76■■■□□ 2.03
NME3-209ENST00000566600 FAM35AQ86V20 835 aa27.76■■■□□ 2.03
NME3-209ENST00000566600 ARHGEF19Q8IW93 802 aa27.76■■■□□ 2.03
NME3-209ENST00000566600 GJD3Q8N144 294 aa27.76■■■□□ 2.03
NME3-209ENST00000566600 UBR7Q8N806 425 aa27.76■■■□□ 2.03
NME3-209ENST00000566600 GIPC2Q8TF65 315 aa27.76■■■□□ 2.03
NME3-209ENST00000566600 SPATA17Q96L03 361 aa27.76■■■□□ 2.03
NME3-209ENST00000566600 C8orf48Q96LL4 319 aa27.76■■■□□ 2.03
NME3-209ENST00000566600 HEXIM2Q96MH2 286 aaKnown RBP27.76■■■□□ 2.03
NME3-209ENST00000566600 VPS16Q9H269 839 aa27.76■■■□□ 2.03
NME3-209ENST00000566600 UBE2TQ9NPD8 197 aaPredicted RBP27.76■■■□□ 2.03
NME3-209ENST00000566600 APEX2Q9UBZ4 518 aa27.76■■■□□ 2.03
NME3-209ENST00000566600 PTPRDP23468 1912 aa27.75■■■□□ 2.03
NME3-209ENST00000566600 MYL4P12829 197 aa27.75■■■□□ 2.03
NME3-209ENST00000566600 RAD23BP54727 409 aa27.75■■■□□ 2.03
NME3-209ENST00000566600 MFAP3P55082 362 aa27.75■■■□□ 2.03
NME3-209ENST00000566600 FKBP15Q5T1M5 1219 aa27.75■■■□□ 2.03
NME3-209ENST00000566600 SMYD5Q6GMV2 418 aa27.75■■■□□ 2.03
NME3-209ENST00000566600 ZDHHC14Q8IZN3 488 aa27.75■■■□□ 2.03
NME3-209ENST00000566600 FUKQ8N0W3 1084 aa27.75■■■□□ 2.03
NME3-209ENST00000566600 C12orf29Q8N999 325 aa27.75■■■□□ 2.03
NME3-209ENST00000566600 SLC4A11Q8NBS3 891 aa27.75■■■□□ 2.03
NME3-209ENST00000566600 SLC2A14Q8TDB8 520 aa27.75■■■□□ 2.03
NME3-209ENST00000566600 CYFIP2Q96F07 1278 aa27.75■■■□□ 2.03
NME3-209ENST00000566600 NECAB3Q96P71 396 aaPredicted RBP27.75■■■□□ 2.03
NME3-209ENST00000566600 HNRNPABQ99729 332 aaKnown RBP27.75■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms