RNA–Protein interactions for RNA: ENST00000565393.2

TCF4-228, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 314 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-228ENST00000565393 SOBPA7XYQ1 873 aa6.86□□□□□ -1.31
TCF4-228ENST00000565393 A8MXQ7 604 aa6.86□□□□□ -1.31
TCF4-228ENST00000565393 CHURC1-FNTBB4DL54 471 aa6.86□□□□□ -1.31
TCF4-228ENST00000565393 ARNTLO00327 626 aa6.86□□□□□ -1.31
TCF4-228ENST00000565393 PRAMEF12O95522 483 aa6.86□□□□□ -1.31
TCF4-228ENST00000565393 USP17L7P0C7H9 530 aa6.86□□□□□ -1.31
TCF4-228ENST00000565393 SLFN14P0C7P3 912 aa6.86□□□□□ -1.31
TCF4-228ENST00000565393 PTPN1P18031 435 aaKnown RBP6.86□□□□□ -1.31
TCF4-228ENST00000565393 HDCP19113 662 aa6.86□□□□□ -1.31
TCF4-228ENST00000565393 BDNFP23560 247 aa6.86□□□□□ -1.31
TCF4-228ENST00000565393 CTHP32929 405 aa6.86□□□□□ -1.31
TCF4-228ENST00000565393 FNTBP49356 437 aa6.86□□□□□ -1.31
TCF4-228ENST00000565393 GALK1P51570 392 aa6.86□□□□□ -1.31
TCF4-228ENST00000565393 MYL6P60660 151 aa6.86□□□□□ -1.31
TCF4-228ENST00000565393 PSMC1P62191 440 aaKnown RBP6.86□□□□□ -1.31
TCF4-228ENST00000565393 TNNC1P63316 161 aa6.86□□□□□ -1.31
TCF4-228ENST00000565393 SATB1Q01826 763 aa6.86□□□□□ -1.31
TCF4-228ENST00000565393 GRSF1Q12849 480 aaKnown RBP eCLIP6.86□□□□□ -1.31
TCF4-228ENST00000565393 NR1H3Q13133 447 aa6.86□□□□□ -1.31
TCF4-228ENST00000565393 PSMD2Q13200 908 aa6.86□□□□□ -1.31
TCF4-228ENST00000565393 BIRC3Q13489 604 aa6.86□□□□□ -1.31
TCF4-228ENST00000565393 PSMD6Q15008 389 aa6.86□□□□□ -1.31
TCF4-228ENST00000565393 LPAL2Q16609 132 aa6.86□□□□□ -1.31
TCF4-228ENST00000565393 RESP18Q5W5W9 173 aa6.86□□□□□ -1.31
TCF4-228ENST00000565393 TRIM68Q6AZZ1 485 aa6.86□□□□□ -1.31
TCF4-228ENST00000565393 CNNM4Q6P4Q7 775 aa6.86□□□□□ -1.31
TCF4-228ENST00000565393 FAM171BQ6P995 826 aa6.86□□□□□ -1.31
TCF4-228ENST00000565393 MAMSTRQ6ZN01 415 aa6.86□□□□□ -1.31
TCF4-228ENST00000565393 PRR23BQ6ZRT6 265 aa6.86□□□□□ -1.31
TCF4-228ENST00000565393 EPM2AIP1Q7L775 607 aaPredicted RBP6.86□□□□□ -1.31
TCF4-228ENST00000565393 TMEM150AQ86TG1 271 aa6.86□□□□□ -1.31
TCF4-228ENST00000565393 GRAMD1CQ8IYS0 662 aa6.86□□□□□ -1.31
TCF4-228ENST00000565393 ZNF687Q8N1G0 1237 aa6.86□□□□□ -1.31
TCF4-228ENST00000565393 GPR161Q8N6U8 529 aaKnown RBP6.86□□□□□ -1.31
TCF4-228ENST00000565393 ARL14EPQ8N8R7 260 aaPredicted RBP6.86□□□□□ -1.31
TCF4-228ENST00000565393 ZBTB44Q8NCP5 570 aa6.86□□□□□ -1.31
TCF4-228ENST00000565393 SPATA18Q8TC71 538 aa6.86□□□□□ -1.31
TCF4-228ENST00000565393 LEO1Q8WVC0 666 aaPredicted RBP6.86□□□□□ -1.31
TCF4-228ENST00000565393 SCFD1Q8WVM8 642 aa6.86□□□□□ -1.31
TCF4-228ENST00000565393 ZNF516Q92618 1163 aa6.86□□□□□ -1.31
TCF4-228ENST00000565393 EXOC4Q96A65 974 aa6.86□□□□□ -1.31
TCF4-228ENST00000565393 PAGE5Q96GU1 130 aa6.86□□□□□ -1.31
TCF4-228ENST00000565393 SPATA32Q96LK8 384 aa6.86□□□□□ -1.31
TCF4-228ENST00000565393 SYT15Q9BQS2 421 aa6.86□□□□□ -1.31
TCF4-228ENST00000565393 MRPL45Q9BRJ2 306 aaKnown RBP6.86□□□□□ -1.31
TCF4-228ENST00000565393 IER2Q9BTL4 223 aa6.86□□□□□ -1.31
TCF4-228ENST00000565393 CHRDQ9H2X0 955 aa6.86□□□□□ -1.31
TCF4-228ENST00000565393 EXOC1Q9NV70 894 aa6.86□□□□□ -1.31
TCF4-228ENST00000565393 DUS2Q9NX74 493 aaKnown RBP6.86□□□□□ -1.31
TCF4-228ENST00000565393 CGNQ9P2M7 1197 aaKnown RBP6.86□□□□□ -1.31
TCF4-228ENST00000565393 CCL26Q9Y258 94 aa6.86□□□□□ -1.31
TCF4-228ENST00000565393 MUC3AQ02505 3323 aa6.86□□□□□ -1.31
TCF4-228ENST00000565393 A0A1B0GVL5 298 aa6.85□□□□□ -1.31
TCF4-228ENST00000565393 HRO43593 1189 aa6.85□□□□□ -1.31
TCF4-228ENST00000565393 ATG13O75143 517 aa6.85□□□□□ -1.31
TCF4-228ENST00000565393 NOL4O94818 638 aa6.85□□□□□ -1.31
TCF4-228ENST00000565393 CKMP06732 381 aa6.85□□□□□ -1.31
TCF4-228ENST00000565393 FAM163BP0C2L3 166 aa6.85□□□□□ -1.31
TCF4-228ENST00000565393 ARSAP15289 507 aa6.85□□□□□ -1.31
TCF4-228ENST00000565393 WARSP23381 471 aaKnown RBP6.85□□□□□ -1.31
TCF4-228ENST00000565393 ATICP31939 592 aa6.85□□□□□ -1.31
TCF4-228ENST00000565393 MAGEA11P43364 429 aa6.85□□□□□ -1.31
TCF4-228ENST00000565393 IFNAR2P48551 515 aa6.85□□□□□ -1.31
TCF4-228ENST00000565393 CDH8P55286 799 aa6.85□□□□□ -1.31
TCF4-228ENST00000565393 FOXK2Q01167 660 aa6.85□□□□□ -1.31
TCF4-228ENST00000565393 CYP24A1Q07973 514 aa6.85□□□□□ -1.31
TCF4-228ENST00000565393 PKP1Q13835 747 aa6.85□□□□□ -1.31
TCF4-228ENST00000565393 SIM2Q14190 667 aaPredicted RBP6.85□□□□□ -1.31
TCF4-228ENST00000565393 KCNB1Q14721 858 aa6.85□□□□□ -1.31
TCF4-228ENST00000565393 PDGFRLQ15198 375 aa6.85□□□□□ -1.31
TCF4-228ENST00000565393 CCDC142Q17RM4 750 aa6.85□□□□□ -1.31
TCF4-228ENST00000565393 KMT5BQ4FZB7 885 aa6.85□□□□□ -1.31
TCF4-228ENST00000565393 CFAP221Q4G0U5 840 aa6.85□□□□□ -1.31
TCF4-228ENST00000565393 MDH1BQ5I0G3 518 aa6.85□□□□□ -1.31
TCF4-228ENST00000565393 TDRD10Q5VZ19 366 aaKnown RBP6.85□□□□□ -1.31
TCF4-228ENST00000565393 TXNDC11Q6PKC3 985 aa6.85□□□□□ -1.31
TCF4-228ENST00000565393 VSTM1Q6UX27 236 aa6.85□□□□□ -1.31
TCF4-228ENST00000565393 Q6ZS52 159 aa6.85□□□□□ -1.31
TCF4-228ENST00000565393 CEP68Q76N32 757 aa6.85□□□□□ -1.31
TCF4-228ENST00000565393 SYNPOQ8N3V7 929 aa6.85□□□□□ -1.31
TCF4-228ENST00000565393 GOLGA5Q8TBA6 731 aa6.85□□□□□ -1.31
TCF4-228ENST00000565393 MYCBPAPQ8TBZ2 947 aa6.85□□□□□ -1.31
TCF4-228ENST00000565393 CCDC47Q96A33 483 aaKnown RBP6.85□□□□□ -1.31
TCF4-228ENST00000565393 SYAP1Q96A49 352 aaPredicted RBP6.85□□□□□ -1.31
TCF4-228ENST00000565393 TRMT2BQ96GJ1 504 aaKnown RBP6.85□□□□□ -1.31
TCF4-228ENST00000565393 PCED1BQ96HM7 432 aa6.85□□□□□ -1.31
TCF4-228ENST00000565393 FUBP3Q96I24 572 aaKnown RBP eCLIP6.85□□□□□ -1.31
TCF4-228ENST00000565393 MYRFLQ96LU7 910 aa6.85□□□□□ -1.31
TCF4-228ENST00000565393 PKMYT1Q99640 499 aa6.85□□□□□ -1.31
TCF4-228ENST00000565393 CGRRF1Q99675 332 aa6.85□□□□□ -1.31
TCF4-228ENST00000565393 FAM83CQ9BQN1 747 aa6.85□□□□□ -1.31
TCF4-228ENST00000565393 MED10Q9BTT4 135 aa6.85□□□□□ -1.31
TCF4-228ENST00000565393 LINC00597Q9H2U6 94 aa6.85□□□□□ -1.31
TCF4-228ENST00000565393 KIF9Q9HAQ2 790 aa6.85□□□□□ -1.31
TCF4-228ENST00000565393 CRTAC1Q9NQ79 661 aa6.85□□□□□ -1.31
TCF4-228ENST00000565393 EHD2Q9NZN4 543 aa6.85□□□□□ -1.31
TCF4-228ENST00000565393 TRPM5Q9NZQ8 1165 aa6.85□□□□□ -1.31
TCF4-228ENST00000565393 CHORDC1Q9UHD1 332 aaPredicted RBP6.85□□□□□ -1.31
TCF4-228ENST00000565393 GMEB2Q9UKD1 530 aa6.85□□□□□ -1.31
TCF4-228ENST00000565393 SMG5Q9UPR3 1016 aaKnown RBP6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms