RNA–Protein interactions for RNA: ENST00000565379.1

NME3-208, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 911 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-208ENST00000565379 RAB33AQ14088 237 aa27.63■■■□□ 2.01
NME3-208ENST00000565379 SYCP1Q15431 976 aa27.63■■■□□ 2.01
NME3-208ENST00000565379 MAPRE1Q15691 268 aaKnown RBP27.63■■■□□ 2.01
NME3-208ENST00000565379 KLHDC7AQ5VTJ3 777 aa27.63■■■□□ 2.01
NME3-208ENST00000565379 SARM1Q6SZW1 724 aa27.63■■■□□ 2.01
NME3-208ENST00000565379 ELMO3Q96BJ8 720 aa27.63■■■□□ 2.01
NME3-208ENST00000565379 TNIP3Q96KP6 325 aa27.63■■■□□ 2.01
NME3-208ENST00000565379 PCMTD1Q96MG8 357 aaPredicted RBP27.63■■■□□ 2.01
NME3-208ENST00000565379 LSM14BQ9BX40 385 aaKnown RBP27.63■■■□□ 2.01
NME3-208ENST00000565379 SDCBP2Q9H190 292 aa27.63■■■□□ 2.01
NME3-208ENST00000565379 UBE2TQ9NPD8 197 aaPredicted RBP27.63■■■□□ 2.01
NME3-208ENST00000565379 CISHQ9NSE2 258 aa27.63■■■□□ 2.01
NME3-208ENST00000565379 IFNKQ9P0W0 207 aa27.63■■■□□ 2.01
NME3-208ENST00000565379 DPP7Q9UHL4 492 aa27.63■■■□□ 2.01
NME3-208ENST00000565379 FBXW11Q9UKB1 542 aa27.63■■■□□ 2.01
NME3-208ENST00000565379 USTQ9Y2C2 406 aa27.63■■■□□ 2.01
NME3-208ENST00000565379 CDY1Q9Y6F8 540 aa27.63■■■□□ 2.01
NME3-208ENST00000565379 DOCK8Q8NF50 2099 aa27.63■■■□□ 2.01
NME3-208ENST00000565379 A8MXQ7 604 aa27.62■■■□□ 2.01
NME3-208ENST00000565379 OR1D2P34982 312 aa27.62■■■□□ 2.01
NME3-208ENST00000565379 TPGS2Q68CL5 300 aa27.62■■■□□ 2.01
NME3-208ENST00000565379 OSTM1Q86WC4 334 aa27.62■■■□□ 2.01
NME3-208ENST00000565379 ST13P5Q8NFI4 369 aaPredicted RBP27.62■■■□□ 2.01
NME3-208ENST00000565379 MYADMQ96S97 322 aa27.62■■■□□ 2.01
NME3-208ENST00000565379 RTP3Q9BQQ7 232 aa27.62■■■□□ 2.01
NME3-208ENST00000565379 ZCWPW1Q9H0M4 648 aa27.62■■■□□ 2.01
NME3-208ENST00000565379 SIX2Q9NPC8 291 aa27.62■■■□□ 2.01
NME3-208ENST00000565379 SORCS3Q9UPU3 1222 aa27.62■■■□□ 2.01
NME3-208ENST00000565379 CLUHO75153 1309 aa27.62■■■□□ 2.01
NME3-208ENST00000565379 TEX33O43247 280 aa27.61■■■□□ 2.01
NME3-208ENST00000565379 CILPO75339 1184 aa27.61■■■□□ 2.01
NME3-208ENST00000565379 RAP1GAPP47736 663 aa27.61■■■□□ 2.01
NME3-208ENST00000565379 VCPP55072 806 aaKnown RBP27.61■■■□□ 2.01
NME3-208ENST00000565379 INTS6LQ5JSJ4 861 aaKnown RBP27.61■■■□□ 2.01
NME3-208ENST00000565379 RRAGAQ7L523 313 aa27.61■■■□□ 2.01
NME3-208ENST00000565379 ARHGEF19Q8IW93 802 aa27.61■■■□□ 2.01
NME3-208ENST00000565379 NEK11Q8NG66 645 aa27.61■■■□□ 2.01
NME3-208ENST00000565379 C2orf15Q8WU43 125 aaKnown RBP27.61■■■□□ 2.01
NME3-208ENST00000565379 NT5C1AQ9BXI3 368 aa27.61■■■□□ 2.01
NME3-208ENST00000565379 PLEKHA4Q9H4M7 779 aa27.61■■■□□ 2.01
NME3-208ENST00000565379 WDR6Q9NNW5 1121 aaKnown RBP27.61■■■□□ 2.01
NME3-208ENST00000565379 ZMYND10O75800 440 aa27.6■■■□□ 2.01
NME3-208ENST00000565379 UCHL3P15374 230 aa27.6■■■□□ 2.01
NME3-208ENST00000565379 AVPR2P30518 371 aa27.6■■■□□ 2.01
NME3-208ENST00000565379 NDST1P52848 882 aa27.6■■■□□ 2.01
NME3-208ENST00000565379 NTHL1P78549 312 aa27.6■■■□□ 2.01
NME3-208ENST00000565379 GPR17Q13304 367 aa27.6■■■□□ 2.01
NME3-208ENST00000565379 NFE2Q16621 373 aaPredicted RBP27.6■■■□□ 2.01
NME3-208ENST00000565379 DPY19L2P1Q6NXN4 242 aa27.6■■■□□ 2.01
NME3-208ENST00000565379 ELMSAN1Q6PJG2 1045 aa27.6■■■□□ 2.01
NME3-208ENST00000565379 OTOP3Q7RTS5 596 aa27.6■■■□□ 2.01
NME3-208ENST00000565379 UBALD2Q8IYN6 164 aa27.6■■■□□ 2.01
NME3-208ENST00000565379 OR10T2Q8NGX3 314 aa27.6■■■□□ 2.01
NME3-208ENST00000565379 ZNF461Q8TAF7 563 aa27.6■■■□□ 2.01
NME3-208ENST00000565379 IQCDQ96DY2 449 aa27.6■■■□□ 2.01
NME3-208ENST00000565379 SYT15Q9BQS2 421 aa27.6■■■□□ 2.01
NME3-208ENST00000565379 DNAJC12Q9UKB3 198 aa27.6■■■□□ 2.01
NME3-208ENST00000565379 TSC2P49815 1807 aa27.6■■■□□ 2.01
NME3-208ENST00000565379 PAPLNO95428 1278 aa27.59■■■□□ 2.01
NME3-208ENST00000565379 CPB1P15086 417 aa27.59■■■□□ 2.01
NME3-208ENST00000565379 CD58P19256 250 aa27.59■■■□□ 2.01
NME3-208ENST00000565379 LMO2P25791 158 aa27.59■■■□□ 2.01
NME3-208ENST00000565379 ROR1Q01973 937 aa27.59■■■□□ 2.01
NME3-208ENST00000565379 TCF15Q12870 199 aa27.59■■■□□ 2.01
NME3-208ENST00000565379 MTMR3Q13615 1198 aa27.59■■■□□ 2.01
NME3-208ENST00000565379 CRYBG2Q8N1P7 616 aa27.59■■■□□ 2.01
NME3-208ENST00000565379 UBR7Q8N806 425 aa27.59■■■□□ 2.01
NME3-208ENST00000565379 HDAC7Q8WUI4 952 aa27.59■■■□□ 2.01
NME3-208ENST00000565379 RSAD2Q8WXG1 361 aa27.59■■■□□ 2.01
NME3-208ENST00000565379 ARID3AQ99856 593 aa27.59■■■□□ 2.01
NME3-208ENST00000565379 PRKD2Q9BZL6 878 aa27.59■■■□□ 2.01
NME3-208ENST00000565379 XPO4Q9C0E2 1151 aaKnown RBP27.59■■■□□ 2.01
NME3-208ENST00000565379 KMT2EQ8IZD2 1858 aa27.58■■■□□ 2.01
NME3-208ENST00000565379 ABLIM3O94929 683 aa27.58■■■□□ 2.01
NME3-208ENST00000565379 PDGFRBP09619 1106 aa27.58■■■□□ 2.01
NME3-208ENST00000565379 GBP2P32456 591 aaPredicted RBP27.58■■■□□ 2.01
NME3-208ENST00000565379 FAM171BQ6P995 826 aa27.58■■■□□ 2.01
NME3-208ENST00000565379 RTL10Q7L3V2 364 aa27.58■■■□□ 2.01
NME3-208ENST00000565379 ACSF2Q96CM8 615 aaPredicted RBP27.58■■■□□ 2.01
NME3-208ENST00000565379 KREMEN1Q96MU8 473 aa27.58■■■□□ 2.01
NME3-208ENST00000565379 NUP58Q9BVL2 599 aa27.58■■■□□ 2.01
NME3-208ENST00000565379 STK33Q9BYT3 514 aa27.58■■■□□ 2.01
NME3-208ENST00000565379 GANQ9H2C0 597 aa27.58■■■□□ 2.01
NME3-208ENST00000565379 PIDD1Q9HB75 910 aa27.58■■■□□ 2.01
NME3-208ENST00000565379 FAM207AQ9NSI2 230 aaPredicted RBP27.58■■■□□ 2.01
NME3-208ENST00000565379 ZDHHC7Q9NXF8 308 aa27.58■■■□□ 2.01
NME3-208ENST00000565379 HSFX1Q9UBD0 423 aa27.58■■■□□ 2.01
NME3-208ENST00000565379 AFF4Q9UHB7 1163 aaKnown RBP27.58■■■□□ 2.01
NME3-208ENST00000565379 CNTN6Q9UQ52 1028 aa27.58■■■□□ 2.01
NME3-208ENST00000565379 CCL16O15467 120 aa27.57■■■□□ 2
NME3-208ENST00000565379 C8AP07357 584 aa27.57■■■□□ 2
NME3-208ENST00000565379 PTPN1P18031 435 aaKnown RBP27.57■■■□□ 2
NME3-208ENST00000565379 ACO1P21399 889 aaKnown RBP27.57■■■□□ 2
NME3-208ENST00000565379 PLCB2Q00722 1185 aa27.57■■■□□ 2
NME3-208ENST00000565379 C4orf50Q6ZRC1 276 aa27.57■■■□□ 2
NME3-208ENST00000565379 GET4Q7L5D6 327 aaPredicted RBP27.57■■■□□ 2
NME3-208ENST00000565379 PLCD3Q8N3E9 789 aa27.57■■■□□ 2
NME3-208ENST00000565379 B3GALNT2Q8NCR0 500 aa27.57■■■□□ 2
NME3-208ENST00000565379 TMEM176AQ96HP8 235 aa27.57■■■□□ 2
NME3-208ENST00000565379 PHOX2BQ99453 314 aa27.57■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms