RNA–Protein interactions for RNA: ENST00000565274.5

CAPN3-214, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-214ENST00000565274 LRRC4CQ9HCJ2 640 aa5.48□□□□□ -1.53
CAPN3-214ENST00000565274 DCP1AQ9NPI6 582 aaPredicted RBP5.48□□□□□ -1.53
CAPN3-214ENST00000565274 HOMER3Q9NSC5 361 aa5.48□□□□□ -1.53
CAPN3-214ENST00000565274 ABHD10Q9NUJ1 306 aa5.48□□□□□ -1.53
CAPN3-214ENST00000565274 FKBP14Q9NWM8 211 aa5.48□□□□□ -1.53
CAPN3-214ENST00000565274 MOCS1Q9NZB8 636 aa5.48□□□□□ -1.53
CAPN3-214ENST00000565274 RGL1Q9NZL6 768 aa5.48□□□□□ -1.53
CAPN3-214ENST00000565274 VPS54Q9P1Q0 977 aa5.48□□□□□ -1.53
CAPN3-214ENST00000565274 SH3BGRL2Q9UJC5 107 aa5.48□□□□□ -1.53
CAPN3-214ENST00000565274 KIAA1257Q9ULG3 409 aa5.48□□□□□ -1.53
CAPN3-214ENST00000565274 HPCAL4Q9UM19 191 aa5.48□□□□□ -1.53
CAPN3-214ENST00000565274 MYO6Q9UM54 1294 aa5.48□□□□□ -1.53
CAPN3-214ENST00000565274 CAPN11Q9UMQ6 739 aa5.48□□□□□ -1.53
CAPN3-214ENST00000565274 PCDHA4Q9UN74 947 aa5.48□□□□□ -1.53
CAPN3-214ENST00000565274 ZNF711Q9Y462 761 aa5.48□□□□□ -1.53
CAPN3-214ENST00000565274 CHD4Q14839 1912 aa5.48□□□□□ -1.53
CAPN3-214ENST00000565274 SPATA31A5Q5VU36 1347 aa5.48□□□□□ -1.53
CAPN3-214ENST00000565274 SPATA31A7Q8IWB4 1347 aa5.48□□□□□ -1.53
CAPN3-214ENST00000565274 WNK3Q9BYP7 1800 aa5.47□□□□□ -1.53
CAPN3-214ENST00000565274 TRAV6A0A075B6T7 132 aa5.47□□□□□ -1.53
CAPN3-214ENST00000565274 A0A0U1RQJ8 604 aa5.47□□□□□ -1.53
CAPN3-214ENST00000565274 A0A1W2PQJ5 194 aa5.47□□□□□ -1.53
CAPN3-214ENST00000565274 hCG_1642624A0A1W2PR95 340 aa5.47□□□□□ -1.53
CAPN3-214ENST00000565274 ESYT2A0FGR8 921 aa5.47□□□□□ -1.53
CAPN3-214ENST00000565274 CLRN2A0PK11 232 aa5.47□□□□□ -1.53
CAPN3-214ENST00000565274 LGALS16A8MUM7 142 aa5.47□□□□□ -1.53
CAPN3-214ENST00000565274 MINDY4BA8MYZ0 360 aa5.47□□□□□ -1.53
CAPN3-214ENST00000565274 AP3B1O00203 1094 aa5.47□□□□□ -1.53
CAPN3-214ENST00000565274 CACNB4O00305 520 aaPredicted RBP5.47□□□□□ -1.53
CAPN3-214ENST00000565274 KLF4O43474 513 aa5.47□□□□□ -1.53
CAPN3-214ENST00000565274 KLRC4O43908 158 aa5.47□□□□□ -1.53
CAPN3-214ENST00000565274 SORBS3O60504 671 aa5.47□□□□□ -1.53
CAPN3-214ENST00000565274 SOCS5O75159 536 aa5.47□□□□□ -1.53
CAPN3-214ENST00000565274 PHACTR2O75167 634 aa5.47□□□□□ -1.53
CAPN3-214ENST00000565274 DGKIO75912 1065 aa5.47□□□□□ -1.53
CAPN3-214ENST00000565274 PLEKHA8P1O95397 391 aa5.47□□□□□ -1.53
CAPN3-214ENST00000565274 TIAF1O95411 115 aa5.47□□□□□ -1.53
CAPN3-214ENST00000565274 SYF2O95926 243 aaKnown RBP5.47□□□□□ -1.53
CAPN3-214ENST00000565274 LDHBP07195 334 aaKnown RBP5.47□□□□□ -1.53
CAPN3-214ENST00000565274 RHOXF2BP0C7M4 288 aa5.47□□□□□ -1.53
CAPN3-214ENST00000565274 ZFXP17010 805 aaPredicted RBP5.47□□□□□ -1.53
CAPN3-214ENST00000565274 CNGA1P29973 690 aa5.47□□□□□ -1.53
CAPN3-214ENST00000565274 TM4SF1P30408 202 aa5.47□□□□□ -1.53
CAPN3-214ENST00000565274 POLR2BP30876 1174 aaKnown RBP5.47□□□□□ -1.53
CAPN3-214ENST00000565274 PRKAR1BP31321 381 aa5.47□□□□□ -1.53
CAPN3-214ENST00000565274 HIBADHP31937 336 aaKnown RBP5.47□□□□□ -1.53
CAPN3-214ENST00000565274 CASP14P31944 242 aa5.47□□□□□ -1.53
CAPN3-214ENST00000565274 CSTF2P33240 577 aaKnown RBP eCLIP5.47□□□□□ -1.53
CAPN3-214ENST00000565274 DNM2P50570 870 aa5.47□□□□□ -1.53
CAPN3-214ENST00000565274 FXR1P51114 621 aaKnown RBP eCLIP5.47□□□□□ -1.53
CAPN3-214ENST00000565274 PHEXP78562 749 aa5.47□□□□□ -1.53
CAPN3-214ENST00000565274 RUNX1T1Q06455 604 aa5.47□□□□□ -1.53
CAPN3-214ENST00000565274 PAK1Q13153 545 aa5.47□□□□□ -1.53
CAPN3-214ENST00000565274 PPA1Q15181 289 aa5.47□□□□□ -1.53
CAPN3-214ENST00000565274 ASIC2Q16515 512 aa5.47□□□□□ -1.53
CAPN3-214ENST00000565274 IL17AQ16552 155 aa5.47□□□□□ -1.53
CAPN3-214ENST00000565274 MAJINQ3KP22 176 aa5.47□□□□□ -1.53
CAPN3-214ENST00000565274 ATP13A4Q4VNC1 1196 aa5.47□□□□□ -1.53
CAPN3-214ENST00000565274 HSP90AA4PQ58FG1 418 aa5.47□□□□□ -1.53
CAPN3-214ENST00000565274 KRBOX4Q5JUW0 171 aa5.47□□□□□ -1.53
CAPN3-214ENST00000565274 EXOSC6Q5RKV6 272 aaKnown RBP5.47□□□□□ -1.53
CAPN3-214ENST00000565274 C12orf60Q5U649 245 aa5.47□□□□□ -1.53
CAPN3-214ENST00000565274 KIAA0319Q5VV43 1072 aa5.47□□□□□ -1.53
CAPN3-214ENST00000565274 PAPD7Q5XG87 772 aaKnown RBP5.47□□□□□ -1.53
CAPN3-214ENST00000565274 XRRA1Q6P2D8 792 aa5.47□□□□□ -1.53
CAPN3-214ENST00000565274 C1orf228Q6PIY5 440 aa5.47□□□□□ -1.53
CAPN3-214ENST00000565274 XKR5Q6UX68 686 aa5.47□□□□□ -1.53
CAPN3-214ENST00000565274 IKBIPQ70UQ0 350 aa5.47□□□□□ -1.53
CAPN3-214ENST00000565274 B4GALNT4Q76KP1 1039 aa5.47□□□□□ -1.53
CAPN3-214ENST00000565274 ZNF572Q7Z3I7 529 aaPredicted RBP5.47□□□□□ -1.53
CAPN3-214ENST00000565274 THNSL2Q86YJ6 484 aa5.47□□□□□ -1.53
CAPN3-214ENST00000565274 CCDC170Q8IYT3 715 aa5.47□□□□□ -1.53
CAPN3-214ENST00000565274 BLIDQ8IZY5 108 aa5.47□□□□□ -1.53
CAPN3-214ENST00000565274 MARCH10Q8NA82 808 aaPredicted RBP5.47□□□□□ -1.53
CAPN3-214ENST00000565274 NOA1Q8NC60 698 aaKnown RBP5.47□□□□□ -1.53
CAPN3-214ENST00000565274 BBOF1Q8ND07 529 aa5.47□□□□□ -1.53
CAPN3-214ENST00000565274 OR8K1Q8NGG5 319 aa5.47□□□□□ -1.53
CAPN3-214ENST00000565274 ALKBH8Q96BT7 664 aaKnown RBP5.47□□□□□ -1.53
CAPN3-214ENST00000565274 MTMR9Q96QG7 549 aa5.47□□□□□ -1.53
CAPN3-214ENST00000565274 ERGIC2Q96RQ1 377 aa5.47□□□□□ -1.53
CAPN3-214ENST00000565274 RUFY1Q96T51 708 aa5.47□□□□□ -1.53
CAPN3-214ENST00000565274 RHOXF2Q9BQY4 288 aa5.47□□□□□ -1.53
CAPN3-214ENST00000565274 GPATCH1Q9BRR8 931 aaKnown RBP5.47□□□□□ -1.53
CAPN3-214ENST00000565274 SPZ1Q9BXG8 430 aa5.47□□□□□ -1.53
CAPN3-214ENST00000565274 SUGCTQ9HAC7 445 aa5.47□□□□□ -1.53
CAPN3-214ENST00000565274 CLK4Q9HAZ1 481 aaKnown RBP5.47□□□□□ -1.53
CAPN3-214ENST00000565274 HPF1Q9NWY4 346 aa5.47□□□□□ -1.53
CAPN3-214ENST00000565274 MTRRQ9UBK8 725 aa5.47□□□□□ -1.53
CAPN3-214ENST00000565274 VTI1BQ9UEU0 232 aa5.47□□□□□ -1.53
CAPN3-214ENST00000565274 NARFQ9UHQ1 456 aa5.47□□□□□ -1.53
CAPN3-214ENST00000565274 EIF2B4Q9UI10 523 aaKnown RBP5.47□□□□□ -1.53
CAPN3-214ENST00000565274 SNX8Q9Y5X2 465 aa5.47□□□□□ -1.53
CAPN3-214ENST00000565274 COL16A1Q07092 1604 aaPredicted RBP5.47□□□□□ -1.53
CAPN3-214ENST00000565274 ABHD14A-ACY1A0A1B0GW23 586 aa5.46□□□□□ -1.54
CAPN3-214ENST00000565274 PVALEFA0A1B0GWK0 134 aa5.46□□□□□ -1.54
CAPN3-214ENST00000565274 KCNJ18B7U540 433 aa5.46□□□□□ -1.54
CAPN3-214ENST00000565274 SNAP23O00161 211 aa5.46□□□□□ -1.54
CAPN3-214ENST00000565274 NDC80O14777 642 aa5.46□□□□□ -1.54
CAPN3-214ENST00000565274 N4BP3O15049 544 aa5.46□□□□□ -1.54
CAPN3-214ENST00000565274 LSM1O15116 133 aaKnown RBP5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms