RNA–Protein interactions for RNA: ENST00000565248.1

THUMPD1-203, Transcript of THUMP domain containing 1, humanhuman

TSL 3

Gene THUMPD1, Length 1,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1-203ENST00000565248 DSEQ9UL01 958 aa17.4■□□□□ 0.38
THUMPD1-203ENST00000565248 CEP83Q9Y592 693 aa17.4■□□□□ 0.38
THUMPD1-203ENST00000565248 ATP8B3O60423 1300 aa17.4■□□□□ 0.38
THUMPD1-203ENST00000565248 A8MXQ7 604 aa17.39■□□□□ 0.37
THUMPD1-203ENST00000565248 KIF2AO00139 706 aaPredicted RBP17.39■□□□□ 0.37
THUMPD1-203ENST00000565248 TRAPPC3O43617 180 aa17.39■□□□□ 0.37
THUMPD1-203ENST00000565248 GFRA3O60609 400 aa17.39■□□□□ 0.37
THUMPD1-203ENST00000565248 H2AFZP0C0S5 128 aa17.39■□□□□ 0.37
THUMPD1-203ENST00000565248 LINC00271P0C7V0 271 aa17.39■□□□□ 0.37
THUMPD1-203ENST00000565248 VDRP11473 427 aa17.39■□□□□ 0.37
THUMPD1-203ENST00000565248 GZMAP12544 262 aa17.39■□□□□ 0.37
THUMPD1-203ENST00000565248 WARSP23381 471 aaKnown RBP17.39■□□□□ 0.37
THUMPD1-203ENST00000565248 OR1G1P47890 313 aa17.39■□□□□ 0.37
THUMPD1-203ENST00000565248 RAD23BP54727 409 aa17.39■□□□□ 0.37
THUMPD1-203ENST00000565248 SOWAHAQ2M3V2 549 aa17.39■□□□□ 0.37
THUMPD1-203ENST00000565248 ZNF662Q6ZS27 426 aa17.39■□□□□ 0.37
THUMPD1-203ENST00000565248 H2AFVQ71UI9 128 aa17.39■□□□□ 0.37
THUMPD1-203ENST00000565248 EFHBQ8N7U6 833 aa17.39■□□□□ 0.37
THUMPD1-203ENST00000565248 SLC30A5Q8TAD4 765 aa17.39■□□□□ 0.37
THUMPD1-203ENST00000565248 LNX1Q8TBB1 728 aaPredicted RBP17.39■□□□□ 0.37
THUMPD1-203ENST00000565248 TNIP3Q96KP6 325 aa17.39■□□□□ 0.37
THUMPD1-203ENST00000565248 TMEM175Q9BSA9 504 aa17.39■□□□□ 0.37
THUMPD1-203ENST00000565248 COLEC11Q9BWP8 271 aa17.39■□□□□ 0.37
THUMPD1-203ENST00000565248 INTUQ9ULD6 942 aa17.39■□□□□ 0.37
THUMPD1-203ENST00000565248 REXO2Q9Y3B8 237 aaKnown RBP17.39■□□□□ 0.37
THUMPD1-203ENST00000565248 CARNS1A5YM72 827 aa17.38■□□□□ 0.37
THUMPD1-203ENST00000565248 LOC730098B7Z3J9 87 aa17.38■□□□□ 0.37
THUMPD1-203ENST00000565248 TMEM189-UBE2V1I3L0A0 370 aa17.38■□□□□ 0.37
THUMPD1-203ENST00000565248 DGKIO75912 1065 aa17.38■□□□□ 0.37
THUMPD1-203ENST00000565248 TUBB4AP04350 444 aa17.38■□□□□ 0.37
THUMPD1-203ENST00000565248 MMEP08473 750 aa17.38■□□□□ 0.37
THUMPD1-203ENST00000565248 CHRNB2P17787 502 aa17.38■□□□□ 0.37
THUMPD1-203ENST00000565248 GNL1P36915 607 aaPredicted RBP17.38■□□□□ 0.37
THUMPD1-203ENST00000565248 LHX1P48742 406 aa17.38■□□□□ 0.37
THUMPD1-203ENST00000565248 AARSP49588 968 aaKnown RBP eCLIP17.38■□□□□ 0.37
THUMPD1-203ENST00000565248 FOXK2Q01167 660 aa17.38■□□□□ 0.37
THUMPD1-203ENST00000565248 FMO1Q01740 532 aa17.38■□□□□ 0.37
THUMPD1-203ENST00000565248 SIGLEC14Q08ET2 396 aa17.38■□□□□ 0.37
THUMPD1-203ENST00000565248 SGO2Q562F6 1265 aa17.38■□□□□ 0.37
THUMPD1-203ENST00000565248 LIMS2Q7Z4I7 341 aa17.38■□□□□ 0.37
THUMPD1-203ENST00000565248 REXO1L1PQ8IX06 675 aa17.38■□□□□ 0.37
THUMPD1-203ENST00000565248 COLGALT2Q8IYK4 626 aa17.38■□□□□ 0.37
THUMPD1-203ENST00000565248 CRIPAKQ8N1N5 446 aa17.38■□□□□ 0.37
THUMPD1-203ENST00000565248 SMRP1Q8NCR6 262 aa17.38■□□□□ 0.37
THUMPD1-203ENST00000565248 ZNF606Q8WXB4 792 aa17.38■□□□□ 0.37
THUMPD1-203ENST00000565248 DDX1Q92499 740 aaKnown RBP17.38■□□□□ 0.37
THUMPD1-203ENST00000565248 HEXIM2Q96MH2 286 aaKnown RBP17.38■□□□□ 0.37
THUMPD1-203ENST00000565248 MRPL45Q9BRJ2 306 aaKnown RBP17.38■□□□□ 0.37
THUMPD1-203ENST00000565248 ELOVL4Q9GZR5 314 aa17.38■□□□□ 0.37
THUMPD1-203ENST00000565248 RC3H2Q9HBD1 1191 aaKnown RBP17.38■□□□□ 0.37
THUMPD1-203ENST00000565248 L1RE1Q9UN81 338 aa17.38■□□□□ 0.37
THUMPD1-203ENST00000565248 TTC3P53804 2025 aa17.38■□□□□ 0.37
THUMPD1-203ENST00000565248 TDRD15B5MCY1 1934 aaKnown RBP17.37■□□□□ 0.37
THUMPD1-203ENST00000565248 USP27XA6NNY8 438 aa17.37■□□□□ 0.37
THUMPD1-203ENST00000565248 ZNF263O14978 683 aa17.37■□□□□ 0.37
THUMPD1-203ENST00000565248 RTN2O75298 545 aa17.37■□□□□ 0.37
THUMPD1-203ENST00000565248 DDHD2O94830 711 aa17.37■□□□□ 0.37
THUMPD1-203ENST00000565248 LSM8O95777 96 aaKnown RBP17.37■□□□□ 0.37
THUMPD1-203ENST00000565248 ALDH2P05091 517 aa17.37■□□□□ 0.37
THUMPD1-203ENST00000565248 BRD2P25440 801 aaKnown RBP17.37■□□□□ 0.37
THUMPD1-203ENST00000565248 TCF15Q12870 199 aa17.37■□□□□ 0.37
THUMPD1-203ENST00000565248 CBX2Q14781 532 aaPredicted RBP17.37■□□□□ 0.37
THUMPD1-203ENST00000565248 PTPN14Q15678 1187 aa17.37■□□□□ 0.37
THUMPD1-203ENST00000565248 ZNF280BQ86YH2 543 aa17.37■□□□□ 0.37
THUMPD1-203ENST00000565248 CMTR2Q8IYT2 770 aaKnown RBP17.37■□□□□ 0.37
THUMPD1-203ENST00000565248 PDCL2Q8N4E4 241 aa17.37■□□□□ 0.37
THUMPD1-203ENST00000565248 SLC4A11Q8NBS3 891 aa17.37■□□□□ 0.37
THUMPD1-203ENST00000565248 WHAMMQ8TF30 809 aa17.37■□□□□ 0.37
THUMPD1-203ENST00000565248 TRIM11Q96F44 468 aa17.37■□□□□ 0.37
THUMPD1-203ENST00000565248 PHF7Q9BWX1 381 aaPredicted RBP17.37■□□□□ 0.37
THUMPD1-203ENST00000565248 ACP6Q9NPH0 428 aa17.37■□□□□ 0.37
THUMPD1-203ENST00000565248 LZTFL1Q9NQ48 299 aa17.37■□□□□ 0.37
THUMPD1-203ENST00000565248 CFAP54Q96N23 3096 aa17.36■□□□□ 0.37
THUMPD1-203ENST00000565248 SPDYE4A6NLX3 237 aa17.36■□□□□ 0.37
THUMPD1-203ENST00000565248 PJA2O43164 708 aa17.36■□□□□ 0.37
THUMPD1-203ENST00000565248 KIF5CO60282 957 aa17.36■□□□□ 0.37
THUMPD1-203ENST00000565248 TADA2AO75478 443 aa17.36■□□□□ 0.37
THUMPD1-203ENST00000565248 KIF4AO95239 1232 aa17.36■□□□□ 0.37
THUMPD1-203ENST00000565248 PCSK1P29120 753 aa17.36■□□□□ 0.37
THUMPD1-203ENST00000565248 NSFP46459 744 aaKnown RBP17.36■□□□□ 0.37
THUMPD1-203ENST00000565248 CLEC16AQ2KHT3 1053 aa17.36■□□□□ 0.37
THUMPD1-203ENST00000565248 WSCD1Q658N2 575 aa17.36■□□□□ 0.37
THUMPD1-203ENST00000565248 TMEM35BQ8NCS4 154 aa17.36■□□□□ 0.37
THUMPD1-203ENST00000565248 MSANTD4Q8NCY6 345 aa17.36■□□□□ 0.37
THUMPD1-203ENST00000565248 C3orf58Q8NDZ4 430 aa17.36■□□□□ 0.37
THUMPD1-203ENST00000565248 CTNNBL1Q8WYA6 563 aaPredicted RBP17.36■□□□□ 0.37
THUMPD1-203ENST00000565248 SUSD3Q96L08 255 aa17.36■□□□□ 0.37
THUMPD1-203ENST00000565248 PAAF1Q9BRP4 392 aa17.36■□□□□ 0.37
THUMPD1-203ENST00000565248 ZNF518BQ9C0D4 1074 aa17.36■□□□□ 0.37
THUMPD1-203ENST00000565248 NRDE2Q9H7Z3 1164 aa17.36■□□□□ 0.37
THUMPD1-203ENST00000565248 CLEC1BQ9P126 229 aa17.36■□□□□ 0.37
THUMPD1-203ENST00000565248 CACNG4Q9UBN1 327 aa17.36■□□□□ 0.37
THUMPD1-203ENST00000565248 NENFQ9UMX5 172 aa17.36■□□□□ 0.37
THUMPD1-203ENST00000565248 PCDHB8Q9UN66 801 aa17.36■□□□□ 0.37
THUMPD1-203ENST00000565248 PCDHGC3Q9UN70 934 aa17.36■□□□□ 0.37
THUMPD1-203ENST00000565248 FAN1Q9Y2M0 1017 aa17.36■□□□□ 0.37
THUMPD1-203ENST00000565248 PRG3Q9Y2Y8 225 aaPredicted RBP17.36■□□□□ 0.37
THUMPD1-203ENST00000565248 SCN1AP35498 2009 aa17.36■□□□□ 0.37
THUMPD1-203ENST00000565248 KMT2EQ8IZD2 1858 aa17.35■□□□□ 0.37
THUMPD1-203ENST00000565248 TMCO5BA8MYB1 307 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms