RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 SPOCD1Q6ZMY3 1216 aa21.49■■□□□ 1.03
MAP1LC3B-206ENST00000564844 RGS9BPQ6ZS82 235 aa21.49■■□□□ 1.03
MAP1LC3B-206ENST00000564844 GATA6Q92908 595 aa21.49■■□□□ 1.03
MAP1LC3B-206ENST00000564844 VTI1AQ96AJ9 217 aa21.49■■□□□ 1.03
MAP1LC3B-206ENST00000564844 CFAP36Q96G28 342 aa21.49■■□□□ 1.03
MAP1LC3B-206ENST00000564844 STX18Q9P2W9 335 aaKnown RBP21.49■■□□□ 1.03
MAP1LC3B-206ENST00000564844 PACSIN3Q9UKS6 424 aa21.49■■□□□ 1.03
MAP1LC3B-206ENST00000564844 PTPRJQ12913 1337 aa21.49■■□□□ 1.03
MAP1LC3B-206ENST00000564844 TMEM63AO94886 807 aa21.48■■□□□ 1.03
MAP1LC3B-206ENST00000564844 CD48P09326 243 aa21.48■■□□□ 1.03
MAP1LC3B-206ENST00000564844 DLDP09622 509 aaKnown RBP21.48■■□□□ 1.03
MAP1LC3B-206ENST00000564844 OCRLQ01968 901 aa21.48■■□□□ 1.03
MAP1LC3B-206ENST00000564844 ZBTB41Q5SVQ8 909 aa21.48■■□□□ 1.03
MAP1LC3B-206ENST00000564844 BANPQ8N9N5 519 aa21.48■■□□□ 1.03
MAP1LC3B-206ENST00000564844 FEZF2Q8TBJ5 459 aa21.48■■□□□ 1.03
MAP1LC3B-206ENST00000564844 IQCGQ9H095 443 aaKnown RBP21.48■■□□□ 1.03
MAP1LC3B-206ENST00000564844 KCND2Q9NZV8 630 aa21.48■■□□□ 1.03
MAP1LC3B-206ENST00000564844 SENP1Q9P0U3 644 aa21.48■■□□□ 1.03
MAP1LC3B-206ENST00000564844 MYH9P35579 1960 aaKnown RBP21.48■■□□□ 1.03
MAP1LC3B-206ENST00000564844 A6NJR5 290 aa21.48■■□□□ 1.03
MAP1LC3B-206ENST00000564844 PSTPIP1O43586 416 aa21.48■■□□□ 1.03
MAP1LC3B-206ENST00000564844 TRAF1Q13077 416 aa21.48■■□□□ 1.03
MAP1LC3B-206ENST00000564844 DMP1Q13316 513 aaPredicted RBP21.48■■□□□ 1.03
MAP1LC3B-206ENST00000564844 LPCAT4Q643R3 524 aa21.48■■□□□ 1.03
MAP1LC3B-206ENST00000564844 GSTCDQ8NEC7 633 aa21.48■■□□□ 1.03
MAP1LC3B-206ENST00000564844 CPT1BQ92523 772 aa21.48■■□□□ 1.03
MAP1LC3B-206ENST00000564844 PANX3Q96QZ0 392 aa21.48■■□□□ 1.03
MAP1LC3B-206ENST00000564844 EBF3Q9H4W6 596 aa21.48■■□□□ 1.03
MAP1LC3B-206ENST00000564844 ZBTB12Q9Y330 459 aaPredicted RBP21.48■■□□□ 1.03
MAP1LC3B-206ENST00000564844 TESPA1A2RU30 521 aaPredicted RBP21.47■■□□□ 1.03
MAP1LC3B-206ENST00000564844 ANPEPP15144 967 aa21.47■■□□□ 1.03
MAP1LC3B-206ENST00000564844 NOMO3P69849 1222 aa21.47■■□□□ 1.03
MAP1LC3B-206ENST00000564844 TMPRSS15P98073 1019 aa21.47■■□□□ 1.03
MAP1LC3B-206ENST00000564844 PRPF39Q86UA1 669 aaKnown RBP21.47■■□□□ 1.03
MAP1LC3B-206ENST00000564844 PPM1NQ8N819 430 aa21.47■■□□□ 1.03
MAP1LC3B-206ENST00000564844 RSAD2Q8WXG1 361 aa21.47■■□□□ 1.03
MAP1LC3B-206ENST00000564844 IFT43Q96FT9 208 aa21.47■■□□□ 1.03
MAP1LC3B-206ENST00000564844 CYP4F11Q9HBI6 524 aa21.47■■□□□ 1.03
MAP1LC3B-206ENST00000564844 XPO7Q9UIA9 1087 aaKnown RBP21.47■■□□□ 1.03
MAP1LC3B-206ENST00000564844 CST8O60676 142 aa21.47■■□□□ 1.03
MAP1LC3B-206ENST00000564844 VCPP55072 806 aaKnown RBP21.47■■□□□ 1.03
MAP1LC3B-206ENST00000564844 PEX6Q13608 980 aa21.47■■□□□ 1.03
MAP1LC3B-206ENST00000564844 MORF4L2Q15014 288 aa21.47■■□□□ 1.03
MAP1LC3B-206ENST00000564844 ZRSR2Q15696 482 aaKnown RBP21.47■■□□□ 1.03
MAP1LC3B-206ENST00000564844 CNPY1Q3B7I2 92 aa21.47■■□□□ 1.03
MAP1LC3B-206ENST00000564844 EFHC2Q5JST6 749 aa21.47■■□□□ 1.03
MAP1LC3B-206ENST00000564844 RAPH1Q70E73 1250 aa21.47■■□□□ 1.03
MAP1LC3B-206ENST00000564844 UNC45BQ8IWX7 931 aa21.47■■□□□ 1.03
MAP1LC3B-206ENST00000564844 SENP7Q9BQF6 1050 aa21.47■■□□□ 1.03
MAP1LC3B-206ENST00000564844 APOBEC3GQ9HC16 384 aaKnown RBP21.47■■□□□ 1.03
MAP1LC3B-206ENST00000564844 TJP2Q9UDY2 1190 aa21.47■■□□□ 1.03
MAP1LC3B-206ENST00000564844 RNASEH1O60930 286 aaKnown RBP21.47■■□□□ 1.03
MAP1LC3B-206ENST00000564844 RARBP10826 455 aa21.47■■□□□ 1.03
MAP1LC3B-206ENST00000564844 ELK3P41970 407 aa21.47■■□□□ 1.03
MAP1LC3B-206ENST00000564844 SLC25A3Q00325 362 aa21.47■■□□□ 1.03
MAP1LC3B-206ENST00000564844 ZNF252P-AS1Q0IIN9 211 aa21.47■■□□□ 1.03
MAP1LC3B-206ENST00000564844 CRY2Q49AN0 593 aa21.47■■□□□ 1.03
MAP1LC3B-206ENST00000564844 TDRPQ86YL5 185 aa21.47■■□□□ 1.03
MAP1LC3B-206ENST00000564844 SKA1Q96BD8 255 aa21.47■■□□□ 1.03
MAP1LC3B-206ENST00000564844 NMD3Q96D46 503 aaKnown RBP21.47■■□□□ 1.03
MAP1LC3B-206ENST00000564844 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.47■■□□□ 1.03
MAP1LC3B-206ENST00000564844 AVENQ9NQS1 362 aaPredicted RBP21.47■■□□□ 1.03
MAP1LC3B-206ENST00000564844 C10orf71Q711Q0 1435 aa21.47■■□□□ 1.03
MAP1LC3B-206ENST00000564844 OR6B1O95007 311 aa21.46■■□□□ 1.03
MAP1LC3B-206ENST00000564844 NLRP11P59045 1033 aaKnown RBP21.46■■□□□ 1.03
MAP1LC3B-206ENST00000564844 MYBPC2Q14324 1141 aa21.46■■□□□ 1.03
MAP1LC3B-206ENST00000564844 ATP11CQ8NB49 1132 aa21.46■■□□□ 1.03
MAP1LC3B-206ENST00000564844 MMP19Q99542 508 aa21.46■■□□□ 1.03
MAP1LC3B-206ENST00000564844 RANBP17Q9H2T7 1088 aaKnown RBP21.46■■□□□ 1.03
MAP1LC3B-206ENST00000564844 MRPL47Q9HD33 250 aaKnown RBP21.46■■□□□ 1.03
MAP1LC3B-206ENST00000564844 ARHGEF4Q9NR80 690 aa21.46■■□□□ 1.03
MAP1LC3B-206ENST00000564844 ASTN2O75129 1339 aaPredicted RBP21.46■■□□□ 1.03
MAP1LC3B-206ENST00000564844 PDE5AO76074 875 aa21.46■■□□□ 1.03
MAP1LC3B-206ENST00000564844 TDRD10Q5VZ19 366 aaKnown RBP21.46■■□□□ 1.03
MAP1LC3B-206ENST00000564844 RELL1Q8IUW5 271 aa21.46■■□□□ 1.03
MAP1LC3B-206ENST00000564844 SCUBE1Q8IWY4 988 aa21.46■■□□□ 1.03
MAP1LC3B-206ENST00000564844 OGFOD1Q8N543 542 aa21.46■■□□□ 1.03
MAP1LC3B-206ENST00000564844 CCDC33Q8N5R6 958 aa21.46■■□□□ 1.03
MAP1LC3B-206ENST00000564844 EMC1Q8N766 993 aa21.46■■□□□ 1.03
MAP1LC3B-206ENST00000564844 GMCL1P1Q8NEA9 526 aa21.46■■□□□ 1.03
MAP1LC3B-206ENST00000564844 DCAKDQ8WVC6 231 aa21.46■■□□□ 1.03
MAP1LC3B-206ENST00000564844 SLC24A2Q9UI40 661 aa21.46■■□□□ 1.03
MAP1LC3B-206ENST00000564844 F5H423 210 aaPredicted RBP21.45■■□□□ 1.02
MAP1LC3B-206ENST00000564844 DHX15O43143 795 aaKnown RBP21.45■■□□□ 1.02
MAP1LC3B-206ENST00000564844 UGT1A9O60656 530 aa21.45■■□□□ 1.02
MAP1LC3B-206ENST00000564844 INHBAP08476 426 aa21.45■■□□□ 1.02
MAP1LC3B-206ENST00000564844 RPL22P35268 128 aaKnown RBP21.45■■□□□ 1.02
MAP1LC3B-206ENST00000564844 AQP5P55064 265 aa21.45■■□□□ 1.02
MAP1LC3B-206ENST00000564844 LMNB2Q03252 620 aa21.45■■□□□ 1.02
MAP1LC3B-206ENST00000564844 ORC1Q13415 861 aa21.45■■□□□ 1.02
MAP1LC3B-206ENST00000564844 TAF5Q15542 800 aa21.45■■□□□ 1.02
MAP1LC3B-206ENST00000564844 HHIPL2Q6UWX4 724 aa21.45■■□□□ 1.02
MAP1LC3B-206ENST00000564844 SCARA5Q6ZMJ2 495 aa21.45■■□□□ 1.02
MAP1LC3B-206ENST00000564844 CCDC110Q8TBZ0 833 aa21.45■■□□□ 1.02
MAP1LC3B-206ENST00000564844 CEP170P1Q96L14 293 aa21.45■■□□□ 1.02
MAP1LC3B-206ENST00000564844 FAM81BQ96LP2 452 aa21.45■■□□□ 1.02
MAP1LC3B-206ENST00000564844 EBF4Q9BQW3 602 aa21.45■■□□□ 1.02
MAP1LC3B-206ENST00000564844 UGT1A7Q9HAW7 530 aa21.45■■□□□ 1.02
MAP1LC3B-206ENST00000564844 UGT1A10Q9HAW8 530 aa21.45■■□□□ 1.02
MAP1LC3B-206ENST00000564844 UGT1A8Q9HAW9 530 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms