RNA–Protein interactions for RNA: ENST00000564593.1

LINC00560-201, long intergenic non-protein coding RNA 560, humanhuman

TSL 1 (best) BASIC

Gene LINC00560, Length 1,599 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00560-201ENST00000564593 ZXDCQ2QGD7 858 aaPredicted RBP5.6□□□□□ -1.51
LINC00560-201ENST00000564593 CD300EQ496F6 205 aaPredicted RBP5.6□□□□□ -1.51
LINC00560-201ENST00000564593 PREPLQ4J6C6 727 aaPredicted RBP5.6□□□□□ -1.51
LINC00560-201ENST00000564593 B3GNTL1Q67FW5 361 aaPredicted RBP5.6□□□□□ -1.51
LINC00560-201ENST00000564593 GGT6Q6P531 493 aa5.6□□□□□ -1.51
LINC00560-201ENST00000564593 TMEM108Q6UXF1 575 aa5.6□□□□□ -1.51
LINC00560-201ENST00000564593 TTC9BQ8N6N2 239 aa5.6□□□□□ -1.51
LINC00560-201ENST00000564593 ZNF527Q8NB42 609 aa5.6□□□□□ -1.51
LINC00560-201ENST00000564593 C8orf49Q96NF6 230 aa5.6□□□□□ -1.51
LINC00560-201ENST00000564593 AKIP1Q9NQ31 210 aa5.6□□□□□ -1.51
LINC00560-201ENST00000564593 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.6□□□□□ -1.51
LINC00560-201ENST00000564593 NISCHQ9Y2I1 1504 aa5.6□□□□□ -1.51
LINC00560-201ENST00000564593 A0A1W2PS29 197 aa5.59□□□□□ -1.51
LINC00560-201ENST00000564593 GAGE12BA1L429 117 aa5.59□□□□□ -1.51
LINC00560-201ENST00000564593 GAGE12HA6NDE8 117 aa5.59□□□□□ -1.51
LINC00560-201ENST00000564593 F5H697 171 aa5.59□□□□□ -1.51
LINC00560-201ENST00000564593 HNRNPDLO14979 420 aaKnown RBP5.59□□□□□ -1.51
LINC00560-201ENST00000564593 FFAR2O15552 330 aa5.59□□□□□ -1.51
LINC00560-201ENST00000564593 CCP110O43303 1012 aa5.59□□□□□ -1.51
LINC00560-201ENST00000564593 HLA-DOAP06340 250 aa5.59□□□□□ -1.51
LINC00560-201ENST00000564593 TPH1P17752 444 aa5.59□□□□□ -1.51
LINC00560-201ENST00000564593 LRPAP1P30533 357 aa5.59□□□□□ -1.51
LINC00560-201ENST00000564593 PTDSS1P48651 473 aaKnown RBP5.59□□□□□ -1.51
LINC00560-201ENST00000564593 RPS7P62081 194 aaKnown RBP5.59□□□□□ -1.51
LINC00560-201ENST00000564593 ICA1Q05084 483 aa5.59□□□□□ -1.51
LINC00560-201ENST00000564593 PUM3Q15397 648 aaKnown RBP5.59□□□□□ -1.51
LINC00560-201ENST00000564593 PDCD2Q16342 344 aaPredicted RBP5.59□□□□□ -1.51
LINC00560-201ENST00000564593 CCDC174Q6PII3 467 aa5.59□□□□□ -1.51
LINC00560-201ENST00000564593 FBXO38Q6PIJ6 1188 aa5.59□□□□□ -1.51
LINC00560-201ENST00000564593 TMPRSS9Q7Z410 1059 aa5.59□□□□□ -1.51
LINC00560-201ENST00000564593 SMCR8Q8TEV9 937 aaPredicted RBP5.59□□□□□ -1.51
LINC00560-201ENST00000564593 MUL1Q969V5 352 aa5.59□□□□□ -1.51
LINC00560-201ENST00000564593 RNF31Q96EP0 1072 aa5.59□□□□□ -1.51
LINC00560-201ENST00000564593 STK33Q9BYT3 514 aa5.59□□□□□ -1.51
LINC00560-201ENST00000564593 DHX36Q9H2U1 1008 aaKnown RBP5.59□□□□□ -1.51
LINC00560-201ENST00000564593 HEYLQ9NQ87 328 aaPredicted RBP5.59□□□□□ -1.51
LINC00560-201ENST00000564593 SMPD4Q9NXE4 827 aa5.59□□□□□ -1.51
LINC00560-201ENST00000564593 CNOT11Q9UKZ1 510 aaKnown RBP5.59□□□□□ -1.51
LINC00560-201ENST00000564593 SLC39A10Q9ULF5 831 aa5.59□□□□□ -1.51
LINC00560-201ENST00000564593 MYADML2A6NDP7 307 aa5.59□□□□□ -1.52
LINC00560-201ENST00000564593 hCG_1984214I3L0E3 225 aa5.59□□□□□ -1.52
LINC00560-201ENST00000564593 ZFPL1O95159 310 aa5.59□□□□□ -1.52
LINC00560-201ENST00000564593 NDST3O95803 873 aa5.59□□□□□ -1.52
LINC00560-201ENST00000564593 HALP42357 657 aa5.59□□□□□ -1.52
LINC00560-201ENST00000564593 NPTX2P47972 431 aa5.59□□□□□ -1.52
LINC00560-201ENST00000564593 ALDH9A1P49189 494 aa5.59□□□□□ -1.52
LINC00560-201ENST00000564593 NDUFV1P49821 464 aa5.59□□□□□ -1.52
LINC00560-201ENST00000564593 RESTQ13127 1097 aa5.59□□□□□ -1.52
LINC00560-201ENST00000564593 HLXQ14774 488 aaPredicted RBP5.59□□□□□ -1.52
LINC00560-201ENST00000564593 NPY5RQ15761 445 aa5.59□□□□□ -1.52
LINC00560-201ENST00000564593 CYP2A13Q16696 494 aa5.59□□□□□ -1.52
LINC00560-201ENST00000564593 TUBB8Q3ZCM7 444 aa5.59□□□□□ -1.52
LINC00560-201ENST00000564593 SPATS1Q496A3 300 aa5.59□□□□□ -1.52
LINC00560-201ENST00000564593 INO80DQ53TQ3 878 aaPredicted RBP5.59□□□□□ -1.52
LINC00560-201ENST00000564593 PLAG1Q6DJT9 500 aa5.59□□□□□ -1.52
LINC00560-201ENST00000564593 KRT28Q7Z3Y7 464 aa5.59□□□□□ -1.52
LINC00560-201ENST00000564593 C1orf210Q8IVY1 113 aa5.59□□□□□ -1.52
LINC00560-201ENST00000564593 PALM2Q8IXS6 379 aa5.59□□□□□ -1.52
LINC00560-201ENST00000564593 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.59□□□□□ -1.52
LINC00560-201ENST00000564593 BPIFB1Q8TDL5 484 aa5.59□□□□□ -1.52
LINC00560-201ENST00000564593 TMEM125Q96AQ2 219 aa5.59□□□□□ -1.52
LINC00560-201ENST00000564593 C18orf8Q96DM3 657 aa5.59□□□□□ -1.52
LINC00560-201ENST00000564593 BOD1Q96IK1 185 aa5.59□□□□□ -1.52
LINC00560-201ENST00000564593 HERPUD2Q9BSE4 406 aa5.59□□□□□ -1.52
LINC00560-201ENST00000564593 PTDSS2Q9BVG9 487 aa5.59□□□□□ -1.52
LINC00560-201ENST00000564593 ALOXE3Q9BYJ1 711 aa5.59□□□□□ -1.52
LINC00560-201ENST00000564593 TM7SF3Q9NS93 570 aa5.59□□□□□ -1.52
LINC00560-201ENST00000564593 PARPBPQ9NWS1 579 aa5.59□□□□□ -1.52
LINC00560-201ENST00000564593 MRPS17Q9Y2R5 130 aaKnown RBP5.59□□□□□ -1.52
LINC00560-201ENST00000564593 SPATA31A3Q5VYP0 1347 aa5.59□□□□□ -1.52
LINC00560-201ENST00000564593 hCG_1642624A0A1W2PR95 340 aa5.58□□□□□ -1.52
LINC00560-201ENST00000564593 FAM234BA2RU67 622 aa5.58□□□□□ -1.52
LINC00560-201ENST00000564593 PODXLO00592 558 aa5.58□□□□□ -1.52
LINC00560-201ENST00000564593 RASAL1O95294 804 aa5.58□□□□□ -1.52
LINC00560-201ENST00000564593 NDUFA10O95299 355 aa5.58□□□□□ -1.52
LINC00560-201ENST00000564593 CHKAP35790 457 aa5.58□□□□□ -1.52
LINC00560-201ENST00000564593 DGKEP52429 567 aa5.58□□□□□ -1.52
LINC00560-201ENST00000564593 COPAP53621 1224 aa5.58□□□□□ -1.52
LINC00560-201ENST00000564593 ITGA8P53708 1063 aa5.58□□□□□ -1.52
LINC00560-201ENST00000564593 EFEMP1Q12805 493 aa5.58□□□□□ -1.52
LINC00560-201ENST00000564593 R3HDM1Q15032 1099 aaKnown RBP5.58□□□□□ -1.52
LINC00560-201ENST00000564593 GEN1Q17RS7 908 aa5.58□□□□□ -1.52
LINC00560-201ENST00000564593 ZIK1Q3SY52 487 aaPredicted RBP5.58□□□□□ -1.52
LINC00560-201ENST00000564593 CCDC38Q502W7 563 aa5.58□□□□□ -1.52
LINC00560-201ENST00000564593 CACHD1Q5VU97 1274 aa5.58□□□□□ -1.52
LINC00560-201ENST00000564593 FCRL6Q6DN72 434 aa5.58□□□□□ -1.52
LINC00560-201ENST00000564593 MICALCLQ6ZW33 695 aa5.58□□□□□ -1.52
LINC00560-201ENST00000564593 KCTD20Q7Z5Y7 419 aa5.58□□□□□ -1.52
LINC00560-201ENST00000564593 ADGRG5Q8IZF4 528 aa5.58□□□□□ -1.52
LINC00560-201ENST00000564593 FAM9AQ8IZU1 332 aaPredicted RBP5.58□□□□□ -1.52
LINC00560-201ENST00000564593 ANKRD42Q8N9B4 389 aa5.58□□□□□ -1.52
LINC00560-201ENST00000564593 CYP2W1Q8TAV3 490 aa5.58□□□□□ -1.52
LINC00560-201ENST00000564593 SNX19Q92543 992 aa5.58□□□□□ -1.52
LINC00560-201ENST00000564593 EXTL1Q92935 676 aa5.58□□□□□ -1.52
LINC00560-201ENST00000564593 PPP2R3CQ969Q6 453 aa5.58□□□□□ -1.52
LINC00560-201ENST00000564593 NACC2Q96BF6 587 aa5.58□□□□□ -1.52
LINC00560-201ENST00000564593 GDF15Q99988 308 aa5.58□□□□□ -1.52
LINC00560-201ENST00000564593 AS3MTQ9HBK9 375 aa5.58□□□□□ -1.52
LINC00560-201ENST00000564593 TESMINQ9Y4I5 508 aa5.58□□□□□ -1.52
LINC00560-201ENST00000564593 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms