RNA–Protein interactions for RNA: ENST00000564587.5

COMMD4-210, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-210ENST00000564587 NCAPGQ9BPX3 1015 aa16.43■□□□□ 0.22
COMMD4-210ENST00000564587 OSBPL7Q9BZF2 842 aa16.43■□□□□ 0.22
COMMD4-210ENST00000564587 CRISPLD2Q9H0B8 497 aa16.43■□□□□ 0.22
COMMD4-210ENST00000564587 ANKZF1Q9H8Y5 726 aa16.43■□□□□ 0.22
COMMD4-210ENST00000564587 TMEM161AQ9NX61 479 aa16.43■□□□□ 0.22
COMMD4-210ENST00000564587 TDRD15B5MCY1 1934 aaKnown RBP16.43■□□□□ 0.22
COMMD4-210ENST00000564587 DCDC2CA8MYV0 355 aa16.42■□□□□ 0.22
COMMD4-210ENST00000564587 KRIT1O00522 736 aa16.42■□□□□ 0.22
COMMD4-210ENST00000564587 RHOXF2BP0C7M4 288 aa16.42■□□□□ 0.22
COMMD4-210ENST00000564587 ODC1P11926 461 aa16.42■□□□□ 0.22
COMMD4-210ENST00000564587 PCSK1P29120 753 aa16.42■□□□□ 0.22
COMMD4-210ENST00000564587 SCNN1AP37088 669 aa16.42■□□□□ 0.22
COMMD4-210ENST00000564587 CLCNKBP51801 687 aa16.42■□□□□ 0.22
COMMD4-210ENST00000564587 BST2Q10589 180 aaKnown RBP16.42■□□□□ 0.22
COMMD4-210ENST00000564587 MBTPS1Q14703 1052 aa16.42■□□□□ 0.22
COMMD4-210ENST00000564587 PKN2Q16513 984 aaKnown RBP16.42■□□□□ 0.22
COMMD4-210ENST00000564587 LONRF2Q1L5Z9 754 aa16.42■□□□□ 0.22
COMMD4-210ENST00000564587 PLEKHG4Q58EX7 1191 aa16.42■□□□□ 0.22
COMMD4-210ENST00000564587 C8orf74Q6P047 294 aa16.42■□□□□ 0.22
COMMD4-210ENST00000564587 CTU1Q7Z7A3 348 aaKnown RBP16.42■□□□□ 0.22
COMMD4-210ENST00000564587 XYLT1Q86Y38 959 aa16.42■□□□□ 0.22
COMMD4-210ENST00000564587 HNRNPLLQ8WVV9 542 aaKnown RBP16.42■□□□□ 0.22
COMMD4-210ENST00000564587 HSFY1Q96LI6 401 aa16.42■□□□□ 0.22
COMMD4-210ENST00000564587 RUNDC3BQ96NL0 473 aa16.42■□□□□ 0.22
COMMD4-210ENST00000564587 CPXM1Q96SM3 734 aa16.42■□□□□ 0.22
COMMD4-210ENST00000564587 HNRNPABQ99729 332 aaKnown RBP16.42■□□□□ 0.22
COMMD4-210ENST00000564587 RHOXF2Q9BQY4 288 aa16.42■□□□□ 0.22
COMMD4-210ENST00000564587 SLC4A5Q9BY07 1137 aa16.42■□□□□ 0.22
COMMD4-210ENST00000564587 SLITRK6Q9H5Y7 841 aa16.42■□□□□ 0.22
COMMD4-210ENST00000564587 RBM12Q9NTZ6 932 aaKnown RBP16.42■□□□□ 0.22
COMMD4-210ENST00000564587 RNF19AQ9NV58 838 aa16.42■□□□□ 0.22
COMMD4-210ENST00000564587 MTUS1Q9ULD2 1270 aa16.42■□□□□ 0.22
COMMD4-210ENST00000564587 FAM170AA1A519 330 aa16.41■□□□□ 0.22
COMMD4-210ENST00000564587 HOXA2O43364 376 aa16.41■□□□□ 0.22
COMMD4-210ENST00000564587 FGGP02679 453 aa16.41■□□□□ 0.22
COMMD4-210ENST00000564587 FGFR1P11362 822 aa16.41■□□□□ 0.22
COMMD4-210ENST00000564587 PTPROQ16827 1216 aa16.41■□□□□ 0.22
COMMD4-210ENST00000564587 MAP9Q49MG5 647 aa16.41■□□□□ 0.22
COMMD4-210ENST00000564587 C2CD6Q53TS8 623 aa16.41■□□□□ 0.22
COMMD4-210ENST00000564587 FBXO46Q6PJ61 603 aaPredicted RBP16.41■□□□□ 0.22
COMMD4-210ENST00000564587 TMCO3Q6UWJ1 677 aa16.41■□□□□ 0.22
COMMD4-210ENST00000564587 TMEM110Q86TL2 294 aa16.41■□□□□ 0.22
COMMD4-210ENST00000564587 C12orf29Q8N999 325 aa16.41■□□□□ 0.22
COMMD4-210ENST00000564587 ANKLE1Q8NAG6 615 aa16.41■□□□□ 0.22
COMMD4-210ENST00000564587 B3GALNT2Q8NCR0 500 aa16.41■□□□□ 0.22
COMMD4-210ENST00000564587 CCDC26Q8TAB7 109 aa16.41■□□□□ 0.22
COMMD4-210ENST00000564587 UBA3Q8TBC4 463 aa16.41■□□□□ 0.22
COMMD4-210ENST00000564587 SLC35F5Q8WV83 523 aa16.41■□□□□ 0.22
COMMD4-210ENST00000564587 ALG3Q92685 438 aa16.41■□□□□ 0.22
COMMD4-210ENST00000564587 KRT35Q92764 455 aa16.41■□□□□ 0.22
COMMD4-210ENST00000564587 MCEEQ96PE7 176 aa16.41■□□□□ 0.22
COMMD4-210ENST00000564587 ST7Q9NRC1 585 aa16.41■□□□□ 0.22
COMMD4-210ENST00000564587 DDX56Q9NY93 547 aaKnown RBP16.41■□□□□ 0.22
COMMD4-210ENST00000564587 CYTH4Q9UIA0 394 aa16.41■□□□□ 0.22
COMMD4-210ENST00000564587 CDH9Q9ULB4 789 aa16.41■□□□□ 0.22
COMMD4-210ENST00000564587 PDE4DIPQ5VU43 2346 aa16.4■□□□□ 0.22
COMMD4-210ENST00000564587 ATP8B1O43520 1251 aa16.4■□□□□ 0.22
COMMD4-210ENST00000564587 POMCP01189 267 aa16.4■□□□□ 0.22
COMMD4-210ENST00000564587 ERBB2P04626 1255 aa16.4■□□□□ 0.22
COMMD4-210ENST00000564587 CYP11A1P05108 521 aa16.4■□□□□ 0.22
COMMD4-210ENST00000564587 PFKMP08237 780 aa16.4■□□□□ 0.22
COMMD4-210ENST00000564587 PDGFRBP09619 1106 aa16.4■□□□□ 0.22
COMMD4-210ENST00000564587 PTPN1P18031 435 aaKnown RBP16.4■□□□□ 0.22
COMMD4-210ENST00000564587 RPL34P49207 117 aaKnown RBP16.4■□□□□ 0.22
COMMD4-210ENST00000564587 HADHQ16836 314 aaKnown RBP16.4■□□□□ 0.22
COMMD4-210ENST00000564587 NOMO2Q5JPE7 1267 aa16.4■□□□□ 0.22
COMMD4-210ENST00000564587 CYP4A22Q5TCH4 519 aa16.4■□□□□ 0.22
COMMD4-210ENST00000564587 DCAF12L1Q5VU92 463 aa16.4■□□□□ 0.22
COMMD4-210ENST00000564587 WSCD1Q658N2 575 aa16.4■□□□□ 0.22
COMMD4-210ENST00000564587 FBXO38Q6PIJ6 1188 aa16.4■□□□□ 0.22
COMMD4-210ENST00000564587 SLC39A5Q6ZMH5 540 aa16.4■□□□□ 0.22
COMMD4-210ENST00000564587 MAATS1Q7Z4T9 603 aa16.4■□□□□ 0.22
COMMD4-210ENST00000564587 PHLDB2Q86SQ0 1253 aa16.4■□□□□ 0.22
COMMD4-210ENST00000564587 RTN4RL1Q86UN2 441 aaPredicted RBP16.4■□□□□ 0.22
COMMD4-210ENST00000564587 KATNAL2Q8IYT4 538 aa16.4■□□□□ 0.22
COMMD4-210ENST00000564587 ARFGAP3Q9NP61 516 aa16.4■□□□□ 0.22
COMMD4-210ENST00000564587 FAM49BQ9NUQ9 324 aa16.4■□□□□ 0.22
COMMD4-210ENST00000564587 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.4■□□□□ 0.22
COMMD4-210ENST00000564587 EHD2Q9NZN4 543 aa16.4■□□□□ 0.22
COMMD4-210ENST00000564587 INPP5FQ9Y2H2 1132 aa16.4■□□□□ 0.22
COMMD4-210ENST00000564587 CASTOR2A6NHX0 329 aa16.39■□□□□ 0.21
COMMD4-210ENST00000564587 GOLGA8SH3BPF8 625 aa16.39■□□□□ 0.21
COMMD4-210ENST00000564587 TMEM189-UBE2V1I3L0A0 370 aa16.39■□□□□ 0.21
COMMD4-210ENST00000564587 M0QZQ0 153 aa16.39■□□□□ 0.21
COMMD4-210ENST00000564587 B3GAT3O94766 335 aa16.39■□□□□ 0.21
COMMD4-210ENST00000564587 TYMPP19971 482 aa16.39■□□□□ 0.21
COMMD4-210ENST00000564587 PSMA2P25787 234 aa16.39■□□□□ 0.21
COMMD4-210ENST00000564587 LMO2P25791 158 aa16.39■□□□□ 0.21
COMMD4-210ENST00000564587 RNASE9P60153 205 aaKnown RBP16.39■□□□□ 0.21
COMMD4-210ENST00000564587 COPS2P61201 443 aa16.39■□□□□ 0.21
COMMD4-210ENST00000564587 RPL7AP62424 266 aaKnown RBP16.39■□□□□ 0.21
COMMD4-210ENST00000564587 PLCB3Q01970 1234 aa16.39■□□□□ 0.21
COMMD4-210ENST00000564587 OR6B2Q6IFH4 312 aa16.39■□□□□ 0.21
COMMD4-210ENST00000564587 LLGL2Q6P1M3 1020 aa16.39■□□□□ 0.21
COMMD4-210ENST00000564587 CC2D1AQ6P1N0 951 aaPredicted RBP16.39■□□□□ 0.21
COMMD4-210ENST00000564587 ARCQ7LC44 396 aa16.39■□□□□ 0.21
COMMD4-210ENST00000564587 POLNQ7Z5Q5 900 aa16.39■□□□□ 0.21
COMMD4-210ENST00000564587 OSTM1Q86WC4 334 aa16.39■□□□□ 0.21
COMMD4-210ENST00000564587 TTC30AQ86WT1 665 aa16.39■□□□□ 0.21
COMMD4-210ENST00000564587 RCOR2Q8IZ40 523 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms