RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 TMX2Q9Y320 296 aa6.05□□□□□ -1.44
UBR1-205ENST00000564540 JUPP14923 745 aa6.04□□□□□ -1.44
UBR1-205ENST00000564540 WT1P19544 449 aaPredicted RBP6.04□□□□□ -1.44
UBR1-205ENST00000564540 LIPAP38571 399 aa6.04□□□□□ -1.44
UBR1-205ENST00000564540 PROK1P58294 105 aa6.04□□□□□ -1.44
UBR1-205ENST00000564540 BMPR2Q13873 1038 aa6.04□□□□□ -1.44
UBR1-205ENST00000564540 SFRP4Q6FHJ7 346 aaPredicted RBP6.04□□□□□ -1.44
UBR1-205ENST00000564540 ZNF280BQ86YH2 543 aa6.04□□□□□ -1.44
UBR1-205ENST00000564540 SLC15A4Q8N697 577 aa6.04□□□□□ -1.44
UBR1-205ENST00000564540 DNAJC5GQ8N7S2 189 aa6.04□□□□□ -1.44
UBR1-205ENST00000564540 ATRIPQ8WXE1 791 aa6.04□□□□□ -1.44
UBR1-205ENST00000564540 MYO1CO00159 1063 aa6.03□□□□□ -1.44
UBR1-205ENST00000564540 BTN3A1O00481 513 aa6.03□□□□□ -1.44
UBR1-205ENST00000564540 THP07101 528 aa6.03□□□□□ -1.44
UBR1-205ENST00000564540 PPIFP30405 207 aaKnown RBP6.03□□□□□ -1.44
UBR1-205ENST00000564540 CCT8P50990 548 aa6.03□□□□□ -1.44
UBR1-205ENST00000564540 GPSM2P81274 684 aa6.03□□□□□ -1.44
UBR1-205ENST00000564540 NHLH1Q02575 133 aa6.03□□□□□ -1.44
UBR1-205ENST00000564540 CTBP1Q13363 440 aa6.03□□□□□ -1.44
UBR1-205ENST00000564540 LLGL1Q15334 1064 aa6.03□□□□□ -1.44
UBR1-205ENST00000564540 FAM153CQ494X1 144 aa6.03□□□□□ -1.44
UBR1-205ENST00000564540 MINDY4Q4G0A6 757 aa6.03□□□□□ -1.44
UBR1-205ENST00000564540 COLEC12Q5KU26 742 aa6.03□□□□□ -1.44
UBR1-205ENST00000564540 TREML2Q5T2D2 321 aa6.03□□□□□ -1.44
UBR1-205ENST00000564540 DTX2Q86UW9 622 aa6.03□□□□□ -1.44
UBR1-205ENST00000564540 MAGEB6Q8N7X4 407 aa6.03□□□□□ -1.44
UBR1-205ENST00000564540 IL31RAQ8NI17 732 aa6.03□□□□□ -1.44
UBR1-205ENST00000564540 KBTBD7Q8WVZ9 684 aa6.03□□□□□ -1.44
UBR1-205ENST00000564540 ATG4AQ8WYN0 398 aa6.03□□□□□ -1.44
UBR1-205ENST00000564540 VOPP1Q96AW1 172 aa6.03□□□□□ -1.44
UBR1-205ENST00000564540 ARHGEF3Q9NR81 526 aa6.03□□□□□ -1.44
UBR1-205ENST00000564540 ADARB2Q9NS39 739 aaKnown RBP6.03□□□□□ -1.44
UBR1-205ENST00000564540 SERTAD4Q9NUC0 356 aa6.03□□□□□ -1.44
UBR1-205ENST00000564540 NDRG4Q9ULP0 352 aaKnown RBP6.03□□□□□ -1.44
UBR1-205ENST00000564540 A0A087WWL8 130 aa6.02□□□□□ -1.45
UBR1-205ENST00000564540 A6NNZ2 444 aa6.02□□□□□ -1.45
UBR1-205ENST00000564540 TMEM233B4DJY2 109 aa6.02□□□□□ -1.45
UBR1-205ENST00000564540 GCOM1H8Y6P7 765 aaPredicted RBP6.02□□□□□ -1.45
UBR1-205ENST00000564540 PROP1O75360 226 aa6.02□□□□□ -1.45
UBR1-205ENST00000564540 RBMXL2O75526 392 aaKnown RBP6.02□□□□□ -1.45
UBR1-205ENST00000564540 IL6RP08887 468 aaPredicted RBP6.02□□□□□ -1.45
UBR1-205ENST00000564540 DRD4P21917 467 aa6.02□□□□□ -1.45
UBR1-205ENST00000564540 ZIK1Q3SY52 487 aaPredicted RBP6.02□□□□□ -1.45
UBR1-205ENST00000564540 PLAC9Q5JTB6 97 aa6.02□□□□□ -1.45
UBR1-205ENST00000564540 ZNF618Q5T7W0 954 aa6.02□□□□□ -1.45
UBR1-205ENST00000564540 NXNQ6DKJ4 435 aa6.02□□□□□ -1.45
UBR1-205ENST00000564540 ZNF783Q6ZMS7 281 aa6.02□□□□□ -1.45
UBR1-205ENST00000564540 ZNF788Q6ZQV5 615 aa6.02□□□□□ -1.45
UBR1-205ENST00000564540 MAEAQ7L5Y9 396 aa6.02□□□□□ -1.45
UBR1-205ENST00000564540 ZNF551Q7Z340 670 aaPredicted RBP6.02□□□□□ -1.45
UBR1-205ENST00000564540 TCEAL8Q8IYN2 117 aa6.02□□□□□ -1.45
UBR1-205ENST00000564540 OR6B3Q8NGW1 331 aa6.02□□□□□ -1.45
UBR1-205ENST00000564540 MOGAT1Q96PD6 335 aa6.02□□□□□ -1.45
UBR1-205ENST00000564540 MESP1Q9BRJ9 268 aa6.02□□□□□ -1.45
UBR1-205ENST00000564540 TMEM60Q9H2L4 133 aa6.02□□□□□ -1.45
UBR1-205ENST00000564540 CXorf36Q9H7Y0 433 aa6.02□□□□□ -1.45
UBR1-205ENST00000564540 DDX20Q9UHI6 824 aaKnown RBP6.02□□□□□ -1.45
UBR1-205ENST00000564540 SHOC2Q9UQ13 582 aa6.02□□□□□ -1.45
UBR1-205ENST00000564540 CAPN8A6NHC0 703 aa6.01□□□□□ -1.45
UBR1-205ENST00000564540 SLC16A3O15427 465 aaKnown RBP6.01□□□□□ -1.45
UBR1-205ENST00000564540 PHGDHO43175 533 aaKnown RBP6.01□□□□□ -1.45
UBR1-205ENST00000564540 TSPAN6O43657 245 aa6.01□□□□□ -1.45
UBR1-205ENST00000564540 NXPH3O95157 252 aa6.01□□□□□ -1.45
UBR1-205ENST00000564540 FESP07332 822 aa6.01□□□□□ -1.45
UBR1-205ENST00000564540 U2AF1L5P0DN76 240 aaPredicted RBP6.01□□□□□ -1.45
UBR1-205ENST00000564540 U2AF1Q01081 240 aaKnown RBP eCLIP6.01□□□□□ -1.45
UBR1-205ENST00000564540 MYO1EQ12965 1108 aa6.01□□□□□ -1.45
UBR1-205ENST00000564540 SLC13A2Q13183 592 aa6.01□□□□□ -1.45
UBR1-205ENST00000564540 E2F2Q14209 437 aa6.01□□□□□ -1.45
UBR1-205ENST00000564540 MLC1Q15049 377 aa6.01□□□□□ -1.45
UBR1-205ENST00000564540 ARHGAP29Q52LW3 1261 aa6.01□□□□□ -1.45
UBR1-205ENST00000564540 TEDDM1Q5T9Z0 273 aa6.01□□□□□ -1.45
UBR1-205ENST00000564540 LMBRD2Q68DH5 695 aaPredicted RBP6.01□□□□□ -1.45
UBR1-205ENST00000564540 KIAA0319LQ8IZA0 1049 aa6.01□□□□□ -1.45
UBR1-205ENST00000564540 MPP5Q8N3R9 675 aa6.01□□□□□ -1.45
UBR1-205ENST00000564540 RAPGEF4Q8WZA2 1011 aa6.01□□□□□ -1.45
UBR1-205ENST00000564540 GLG1Q92896 1179 aa6.01□□□□□ -1.45
UBR1-205ENST00000564540 C22orf23Q9BZE7 217 aa6.01□□□□□ -1.45
UBR1-205ENST00000564540 DPH1Q9BZG8 443 aa6.01□□□□□ -1.45
UBR1-205ENST00000564540 SMURF2Q9HAU4 748 aa6.01□□□□□ -1.45
UBR1-205ENST00000564540 TCEAL9Q9UHQ7 104 aa6.01□□□□□ -1.45
UBR1-205ENST00000564540 WNT6Q9Y6F9 365 aa6.01□□□□□ -1.45
UBR1-205ENST00000564540 USP19O94966 1318 aa6□□□□□ -1.45
UBR1-205ENST00000564540 FAM227AF5H4B4 570 aa6□□□□□ -1.45
UBR1-205ENST00000564540 TBX3O15119 743 aa6□□□□□ -1.45
UBR1-205ENST00000564540 TLR5O60602 858 aa6□□□□□ -1.45
UBR1-205ENST00000564540 CSF1RP07333 972 aa6□□□□□ -1.45
UBR1-205ENST00000564540 NDUFB7P17568 137 aa6□□□□□ -1.45
UBR1-205ENST00000564540 SLC7A1P30825 629 aa6□□□□□ -1.45
UBR1-205ENST00000564540 ALDH9A1P49189 494 aa6□□□□□ -1.45
UBR1-205ENST00000564540 KRT17Q04695 432 aa6□□□□□ -1.45
UBR1-205ENST00000564540 CNN3Q15417 329 aaKnown RBP6□□□□□ -1.45
UBR1-205ENST00000564540 LRCH2Q5VUJ6 765 aa6□□□□□ -1.45
UBR1-205ENST00000564540 ANKRD13AQ8IZ07 590 aa6□□□□□ -1.45
UBR1-205ENST00000564540 MAML1Q92585 1016 aa6□□□□□ -1.45
UBR1-205ENST00000564540 TSR2Q969E8 191 aaKnown RBP6□□□□□ -1.45
UBR1-205ENST00000564540 MS4A7Q9GZW8 240 aaPredicted RBP6□□□□□ -1.45
UBR1-205ENST00000564540 C1orf112Q9NSG2 853 aa6□□□□□ -1.45
UBR1-205ENST00000564540 PADI4Q9UM07 663 aa6□□□□□ -1.45
UBR1-205ENST00000564540 L1RE1Q9UN81 338 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms