RNA–Protein interactions for RNA: ENST00000564236.1

CCNF-203, Transcript of cyclin F, humanhuman

TSL 3

Gene CCNF, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-203ENST00000564236 TFIP11Q9UBB9 837 aaKnown RBP17.95■□□□□ 0.46
CCNF-203ENST00000564236 GTF3C4Q9UKN8 822 aa17.95■□□□□ 0.46
CCNF-203ENST00000564236 K7ESF4 209 aa17.94■□□□□ 0.46
CCNF-203ENST00000564236 KRT19P08727 400 aa17.94■□□□□ 0.46
CCNF-203ENST00000564236 CYP2F1P24903 491 aa17.94■□□□□ 0.46
CCNF-203ENST00000564236 AVPR1AP37288 418 aa17.94■□□□□ 0.46
CCNF-203ENST00000564236 GPR15P49685 360 aa17.94■□□□□ 0.46
CCNF-203ENST00000564236 SATB1Q01826 763 aa17.94■□□□□ 0.46
CCNF-203ENST00000564236 ITPRIPL2Q3MIP1 535 aa17.94■□□□□ 0.46
CCNF-203ENST00000564236 C12orf56Q8IXR9 622 aa17.94■□□□□ 0.46
CCNF-203ENST00000564236 DCLK2Q8N568 766 aa17.94■□□□□ 0.46
CCNF-203ENST00000564236 TMEM174Q8WUU8 243 aa17.94■□□□□ 0.46
CCNF-203ENST00000564236 SCFD1Q8WVM8 642 aa17.94■□□□□ 0.46
CCNF-203ENST00000564236 MRPS31Q92665 395 aaKnown RBP17.94■□□□□ 0.46
CCNF-203ENST00000564236 DHX58Q96C10 678 aa17.94■□□□□ 0.46
CCNF-203ENST00000564236 HPDLQ96IR7 371 aa17.94■□□□□ 0.46
CCNF-203ENST00000564236 CGNQ9P2M7 1197 aaKnown RBP17.94■□□□□ 0.46
CCNF-203ENST00000564236 CDH9Q9ULB4 789 aa17.94■□□□□ 0.46
CCNF-203ENST00000564236 PVALEFA0A1B0GWK0 134 aa17.93■□□□□ 0.46
CCNF-203ENST00000564236 STAU1O95793 577 aaKnown RBP17.93■□□□□ 0.46
CCNF-203ENST00000564236 TNNC2P02585 160 aa17.93■□□□□ 0.46
CCNF-203ENST00000564236 ZSCAN22P10073 491 aaPredicted RBP17.93■□□□□ 0.46
CCNF-203ENST00000564236 TCF3P15923 654 aa17.93■□□□□ 0.46
CCNF-203ENST00000564236 TGM1P22735 817 aa17.93■□□□□ 0.46
CCNF-203ENST00000564236 WARSP23381 471 aaKnown RBP17.93■□□□□ 0.46
CCNF-203ENST00000564236 ACAT1P24752 427 aaKnown RBP17.93■□□□□ 0.46
CCNF-203ENST00000564236 CNR2P34972 360 aa17.93■□□□□ 0.46
CCNF-203ENST00000564236 ASIC1P78348 528 aa17.93■□□□□ 0.46
CCNF-203ENST00000564236 TNK2Q07912 1038 aa17.93■□□□□ 0.46
CCNF-203ENST00000564236 PSMD6Q15008 389 aa17.93■□□□□ 0.46
CCNF-203ENST00000564236 SNRNP35Q16560 246 aaKnown RBP17.93■□□□□ 0.46
CCNF-203ENST00000564236 VSTM1Q6UX27 236 aa17.93■□□□□ 0.46
CCNF-203ENST00000564236 GPIHBP1Q8IV16 184 aa17.93■□□□□ 0.46
CCNF-203ENST00000564236 MAB21L3Q8N8X9 362 aa17.93■□□□□ 0.46
CCNF-203ENST00000564236 SECISBP2LQ93073 1101 aaKnown RBP17.93■□□□□ 0.46
CCNF-203ENST00000564236 CHFRQ96EP1 664 aa17.93■□□□□ 0.46
CCNF-203ENST00000564236 SPATA17Q96L03 361 aa17.93■□□□□ 0.46
CCNF-203ENST00000564236 SMG9Q9H0W8 520 aaKnown RBP17.93■□□□□ 0.46
CCNF-203ENST00000564236 HPS4Q9NQG7 708 aa17.93■□□□□ 0.46
CCNF-203ENST00000564236 CCL26Q9Y258 94 aa17.93■□□□□ 0.46
CCNF-203ENST00000564236 TACC1O75410 805 aa17.92■□□□□ 0.46
CCNF-203ENST00000564236 F13A1P00488 732 aa17.92■□□□□ 0.46
CCNF-203ENST00000564236 CDR1P51861 262 aa17.92■□□□□ 0.46
CCNF-203ENST00000564236 RUNX3Q13761 415 aa17.92■□□□□ 0.46
CCNF-203ENST00000564236 PUM1Q14671 1186 aaKnown RBP eCLIP17.92■□□□□ 0.46
CCNF-203ENST00000564236 MAPRE1Q15691 268 aaKnown RBP17.92■□□□□ 0.46
CCNF-203ENST00000564236 DDR2Q16832 855 aa17.92■□□□□ 0.46
CCNF-203ENST00000564236 TMEM196Q5HYL7 178 aa17.92■□□□□ 0.46
CCNF-203ENST00000564236 RESP18Q5W5W9 173 aa17.92■□□□□ 0.46
CCNF-203ENST00000564236 LMBRD2Q68DH5 695 aaPredicted RBP17.92■□□□□ 0.46
CCNF-203ENST00000564236 TXNDC8Q6A555 127 aa17.92■□□□□ 0.46
CCNF-203ENST00000564236 C4orf50Q6ZRC1 276 aa17.92■□□□□ 0.46
CCNF-203ENST00000564236 Q6ZS52 159 aa17.92■□□□□ 0.46
CCNF-203ENST00000564236 TRAPPC11Q7Z392 1133 aa17.92■□□□□ 0.46
CCNF-203ENST00000564236 SPATA2LQ8IUW3 424 aaPredicted RBP17.92■□□□□ 0.46
CCNF-203ENST00000564236 RIN3Q8TB24 985 aa17.92■□□□□ 0.46
CCNF-203ENST00000564236 HINFPQ9BQA5 517 aa17.92■□□□□ 0.46
CCNF-203ENST00000564236 GZF1Q9H116 711 aaPredicted RBP17.92■□□□□ 0.46
CCNF-203ENST00000564236 GKN1Q9NS71 199 aa17.92■□□□□ 0.46
CCNF-203ENST00000564236 RBM12Q9NTZ6 932 aaKnown RBP17.92■□□□□ 0.46
CCNF-203ENST00000564236 NCDNQ9UBB6 729 aa17.92■□□□□ 0.46
CCNF-203ENST00000564236 TRDMT1O14717 391 aaKnown RBP17.91■□□□□ 0.46
CCNF-203ENST00000564236 POLR2DO15514 142 aaKnown RBP17.91■□□□□ 0.46
CCNF-203ENST00000564236 HCRTO43612 131 aa17.91■□□□□ 0.46
CCNF-203ENST00000564236 PFKLP17858 780 aa17.91■□□□□ 0.46
CCNF-203ENST00000564236 LMO2P25791 158 aa17.91■□□□□ 0.46
CCNF-203ENST00000564236 FAM160A1Q05DH4 1040 aa17.91■□□□□ 0.46
CCNF-203ENST00000564236 CYP24A1Q07973 514 aa17.91■□□□□ 0.46
CCNF-203ENST00000564236 PON2Q15165 354 aa17.91■□□□□ 0.46
CCNF-203ENST00000564236 CCDC142Q17RM4 750 aa17.91■□□□□ 0.46
CCNF-203ENST00000564236 SDHAF4Q5VUM1 108 aa17.91■□□□□ 0.46
CCNF-203ENST00000564236 KIAA1958Q8N8K9 716 aa17.91■□□□□ 0.46
CCNF-203ENST00000564236 XXYLT1Q8NBI6 393 aa17.91■□□□□ 0.46
CCNF-203ENST00000564236 CGRRF1Q99675 332 aa17.91■□□□□ 0.46
CCNF-203ENST00000564236 SYT15Q9BQS2 421 aa17.91■□□□□ 0.46
CCNF-203ENST00000564236 CRTAC1Q9NQ79 661 aa17.91■□□□□ 0.46
CCNF-203ENST00000564236 GCNT4Q9P109 453 aa17.91■□□□□ 0.46
CCNF-203ENST00000564236 PCDHA7Q9UN72 937 aa17.91■□□□□ 0.46
CCNF-203ENST00000564236 R3HCC1Q9Y3T6 440 aaKnown RBP17.91■□□□□ 0.46
CCNF-203ENST00000564236 TCHHQ07283 1943 aa17.9■□□□□ 0.46
CCNF-203ENST00000564236 OTOL1A6NHN0 477 aaPredicted RBP17.9■□□□□ 0.46
CCNF-203ENST00000564236 USP4Q13107 963 aa17.9■□□□□ 0.46
CCNF-203ENST00000564236 PDGFRLQ15198 375 aa17.9■□□□□ 0.46
CCNF-203ENST00000564236 ZNF77Q15935 545 aa17.9■□□□□ 0.46
CCNF-203ENST00000564236 LAIR1Q6GTX8 287 aa17.9■□□□□ 0.46
CCNF-203ENST00000564236 HS2ST1Q7LGA3 356 aa17.9■□□□□ 0.46
CCNF-203ENST00000564236 LONP2Q86WA8 852 aa17.9■□□□□ 0.46
CCNF-203ENST00000564236 STKLD1Q8NE28 680 aa17.9■□□□□ 0.46
CCNF-203ENST00000564236 NOC3LQ8WTT2 800 aaKnown RBP17.9■□□□□ 0.46
CCNF-203ENST00000564236 TTLL2Q9BWV7 592 aa17.9■□□□□ 0.46
CCNF-203ENST00000564236 VRTNQ9H8Y1 702 aa17.9■□□□□ 0.46
CCNF-203ENST00000564236 MAGED2Q9UNF1 606 aaPredicted RBP17.9■□□□□ 0.46
CCNF-203ENST00000564236 CCDC163A0A0D9SF12 145 aa17.89■□□□□ 0.45
CCNF-203ENST00000564236 LRP3O75074 770 aa17.89■□□□□ 0.45
CCNF-203ENST00000564236 ATP2C2O75185 946 aa17.89■□□□□ 0.45
CCNF-203ENST00000564236 CST3P01034 146 aaPredicted RBP17.89■□□□□ 0.45
CCNF-203ENST00000564236 USP17L7P0C7H9 530 aa17.89■□□□□ 0.45
CCNF-203ENST00000564236 SDHBP21912 280 aa17.89■□□□□ 0.45
CCNF-203ENST00000564236 CLDN10P78369 228 aa17.89■□□□□ 0.45
CCNF-203ENST00000564236 AMPD2Q01433 879 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms