RNA–Protein interactions for RNA: ENST00000563963.1

TUBGCP4-207, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 2

Gene TUBGCP4, Length 4,379 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-207ENST00000563963 PABPC1P11940 636 aaKnown RBP6.2□□□□□ -1.42
TUBGCP4-207ENST00000563963 XPAP23025 273 aaPredicted RBP6.2□□□□□ -1.42
TUBGCP4-207ENST00000563963 PDHA2P29803 388 aa6.2□□□□□ -1.42
TUBGCP4-207ENST00000563963 SCTRP47872 440 aa6.2□□□□□ -1.42
TUBGCP4-207ENST00000563963 CLK3P49761 638 aaKnown RBP6.2□□□□□ -1.42
TUBGCP4-207ENST00000563963 CCNG1P51959 295 aa6.2□□□□□ -1.42
TUBGCP4-207ENST00000563963 RPP30P78346 268 aaKnown RBP6.2□□□□□ -1.42
TUBGCP4-207ENST00000563963 NR5A1Q13285 461 aa6.2□□□□□ -1.42
TUBGCP4-207ENST00000563963 ALG1LQ6GMV1 187 aa6.2□□□□□ -1.42
TUBGCP4-207ENST00000563963 POTEBQ6S5H4 581 aa6.2□□□□□ -1.42
TUBGCP4-207ENST00000563963 CYP2U1Q7Z449 544 aa6.2□□□□□ -1.42
TUBGCP4-207ENST00000563963 PHF21AQ96BD5 680 aa6.2□□□□□ -1.42
TUBGCP4-207ENST00000563963 EYA3Q99504 573 aa6.2□□□□□ -1.42
TUBGCP4-207ENST00000563963 ELAC2Q9BQ52 826 aaKnown RBP6.2□□□□□ -1.42
TUBGCP4-207ENST00000563963 PSD2Q9BQI7 771 aa6.2□□□□□ -1.42
TUBGCP4-207ENST00000563963 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.2□□□□□ -1.42
TUBGCP4-207ENST00000563963 SAMSN1Q9NSI8 373 aaKnown RBP6.2□□□□□ -1.42
TUBGCP4-207ENST00000563963 NKIRAS2Q9NYR9 191 aa6.2□□□□□ -1.42
TUBGCP4-207ENST00000563963 GPRC5BQ9NZH0 403 aa6.2□□□□□ -1.42
TUBGCP4-207ENST00000563963 DMTF1Q9Y222 760 aa6.2□□□□□ -1.42
TUBGCP4-207ENST00000563963 CLEC11AQ9Y240 323 aa6.2□□□□□ -1.42
TUBGCP4-207ENST00000563963 LRCH1Q9Y2L9 728 aa6.2□□□□□ -1.42
TUBGCP4-207ENST00000563963 TTC21AQ8NDW8 1320 aa6.19□□□□□ -1.42
TUBGCP4-207ENST00000563963 SHOXO15266 292 aa6.19□□□□□ -1.42
TUBGCP4-207ENST00000563963 NOS1APO75052 506 aaPredicted RBP6.19□□□□□ -1.42
TUBGCP4-207ENST00000563963 N4BP1O75113 896 aaKnown RBP6.19□□□□□ -1.42
TUBGCP4-207ENST00000563963 ATP2C2O75185 946 aa6.19□□□□□ -1.42
TUBGCP4-207ENST00000563963 ANXA8P13928 327 aa6.19□□□□□ -1.42
TUBGCP4-207ENST00000563963 ACADSP16219 412 aa6.19□□□□□ -1.42
TUBGCP4-207ENST00000563963 ARFIP2P53365 341 aa6.19□□□□□ -1.42
TUBGCP4-207ENST00000563963 STX1BP61266 288 aa6.19□□□□□ -1.42
TUBGCP4-207ENST00000563963 RHAGQ02094 409 aa6.19□□□□□ -1.42
TUBGCP4-207ENST00000563963 KRT17Q04695 432 aa6.19□□□□□ -1.42
TUBGCP4-207ENST00000563963 ZMYND11Q15326 602 aa6.19□□□□□ -1.42
TUBGCP4-207ENST00000563963 AARDQ4LEZ3 155 aa6.19□□□□□ -1.42
TUBGCP4-207ENST00000563963 ANXA8L1Q5VT79 327 aa6.19□□□□□ -1.42
TUBGCP4-207ENST00000563963 UNC13DQ70J99 1090 aa6.19□□□□□ -1.42
TUBGCP4-207ENST00000563963 RAB11FIP2Q7L804 512 aa6.19□□□□□ -1.42
TUBGCP4-207ENST00000563963 OTOP3Q7RTS5 596 aa6.19□□□□□ -1.42
TUBGCP4-207ENST00000563963 TMTC1Q8IUR5 882 aa6.19□□□□□ -1.42
TUBGCP4-207ENST00000563963 ANKFN1Q8N957 763 aa6.19□□□□□ -1.42
TUBGCP4-207ENST00000563963 AVL9Q8NBF6 648 aa6.19□□□□□ -1.42
TUBGCP4-207ENST00000563963 TRIM43Q96BQ3 446 aaPredicted RBP6.19□□□□□ -1.42
TUBGCP4-207ENST00000563963 MFSD14AQ96MC6 490 aa6.19□□□□□ -1.42
TUBGCP4-207ENST00000563963 NMRK1Q9NWW6 199 aa6.19□□□□□ -1.42
TUBGCP4-207ENST00000563963 PKD2L2Q9NZM6 624 aa6.19□□□□□ -1.42
TUBGCP4-207ENST00000563963 GMEB2Q9UKD1 530 aa6.19□□□□□ -1.42
TUBGCP4-207ENST00000563963 COG5Q9UP83 839 aa6.19□□□□□ -1.42
TUBGCP4-207ENST00000563963 PCDHGA2Q9Y5H1 932 aa6.19□□□□□ -1.42
TUBGCP4-207ENST00000563963 CACNA1AO00555 2505 aa6.19□□□□□ -1.42
TUBGCP4-207ENST00000563963 NEXMIFQ5QGS0 1516 aa6.19□□□□□ -1.42
TUBGCP4-207ENST00000563963 SMIM31A0A1B0GVY4 71 aa6.19□□□□□ -1.42
TUBGCP4-207ENST00000563963 KERAO60938 352 aa6.19□□□□□ -1.42
TUBGCP4-207ENST00000563963 UFL1O94874 794 aa6.19□□□□□ -1.42
TUBGCP4-207ENST00000563963 GNA14O95837 355 aa6.19□□□□□ -1.42
TUBGCP4-207ENST00000563963 CYP1A1P04798 512 aaPredicted RBP6.19□□□□□ -1.42
TUBGCP4-207ENST00000563963 IFNA16P05015 189 aa6.19□□□□□ -1.42
TUBGCP4-207ENST00000563963 ATF4P18848 351 aaPredicted RBP6.19□□□□□ -1.42
TUBGCP4-207ENST00000563963 TFEBP19484 476 aa6.19□□□□□ -1.42
TUBGCP4-207ENST00000563963 CAPN3P20807 821 aa6.19□□□□□ -1.42
TUBGCP4-207ENST00000563963 ARL1P40616 181 aaPredicted RBP6.19□□□□□ -1.42
TUBGCP4-207ENST00000563963 SLCO1A2P46721 670 aa6.19□□□□□ -1.42
TUBGCP4-207ENST00000563963 UBE2HP62256 183 aa6.19□□□□□ -1.42
TUBGCP4-207ENST00000563963 CENPCQ03188 943 aa6.19□□□□□ -1.42
TUBGCP4-207ENST00000563963 TRIM25Q14258 630 aaKnown RBP6.19□□□□□ -1.42
TUBGCP4-207ENST00000563963 TMEM63BQ5T3F8 832 aa6.19□□□□□ -1.42
TUBGCP4-207ENST00000563963 TRIM72Q6ZMU5 477 aa6.19□□□□□ -1.42
TUBGCP4-207ENST00000563963 DNAAF5Q86Y56 855 aa6.19□□□□□ -1.42
TUBGCP4-207ENST00000563963 ELMOD1Q8N336 334 aa6.19□□□□□ -1.42
TUBGCP4-207ENST00000563963 ZNF473Q8WTR7 871 aaKnown RBP6.19□□□□□ -1.42
TUBGCP4-207ENST00000563963 DNAJC9Q8WXX5 260 aa6.19□□□□□ -1.42
TUBGCP4-207ENST00000563963 RFKQ969G6 155 aa6.19□□□□□ -1.42
TUBGCP4-207ENST00000563963 WDR24Q96S15 920 aa6.19□□□□□ -1.42
TUBGCP4-207ENST00000563963 ZCCHC2Q9C0B9 1178 aaKnown RBP6.19□□□□□ -1.42
TUBGCP4-207ENST00000563963 TMEM60Q9H2L4 133 aa6.19□□□□□ -1.42
TUBGCP4-207ENST00000563963 GLRX2Q9NS18 164 aa6.19□□□□□ -1.42
TUBGCP4-207ENST00000563963 C20orf96Q9NUD7 363 aaPredicted RBP6.19□□□□□ -1.42
TUBGCP4-207ENST00000563963 ETNK2Q9NVF9 386 aa6.19□□□□□ -1.42
TUBGCP4-207ENST00000563963 PTTG2Q9NZH5 202 aa6.19□□□□□ -1.42
TUBGCP4-207ENST00000563963 POLHQ9Y253 713 aa6.19□□□□□ -1.42
TUBGCP4-207ENST00000563963 WBP11Q9Y2W2 641 aaKnown RBP6.19□□□□□ -1.42
TUBGCP4-207ENST00000563963 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.19□□□□□ -1.42
TUBGCP4-207ENST00000563963 RAB19A4D1S5 217 aa6.19□□□□□ -1.42
TUBGCP4-207ENST00000563963 NCF1BA6NI72 391 aaPredicted RBP6.19□□□□□ -1.42
TUBGCP4-207ENST00000563963 NCF1CA8MVU1 366 aaPredicted RBP6.19□□□□□ -1.42
TUBGCP4-207ENST00000563963 L7N2F9 121 aa6.19□□□□□ -1.42
TUBGCP4-207ENST00000563963 PER2O15055 1255 aa6.19□□□□□ -1.42
TUBGCP4-207ENST00000563963 MAN2A2P49641 1150 aa6.19□□□□□ -1.42
TUBGCP4-207ENST00000563963 ERV3-1Q14264 604 aa6.19□□□□□ -1.42
TUBGCP4-207ENST00000563963 SLC9A5Q14940 896 aa6.19□□□□□ -1.42
TUBGCP4-207ENST00000563963 C6orf132Q5T0Z8 1188 aa6.19□□□□□ -1.42
TUBGCP4-207ENST00000563963 NAA35Q5VZE5 725 aa6.19□□□□□ -1.42
TUBGCP4-207ENST00000563963 TPGS2Q68CL5 300 aa6.19□□□□□ -1.42
TUBGCP4-207ENST00000563963 IQSEC1Q6DN90 963 aa6.19□□□□□ -1.42
TUBGCP4-207ENST00000563963 CASC4Q6P4E1 433 aa6.19□□□□□ -1.42
TUBGCP4-207ENST00000563963 C16orf86Q6ZW13 317 aa6.19□□□□□ -1.42
TUBGCP4-207ENST00000563963 MIB1Q86YT6 1006 aa6.19□□□□□ -1.42
TUBGCP4-207ENST00000563963 ARHGAP24Q8N264 748 aa6.19□□□□□ -1.42
TUBGCP4-207ENST00000563963 MINDY2Q8NBR6 621 aa6.19□□□□□ -1.42
TUBGCP4-207ENST00000563963 DENND1AQ8TEH3 1009 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms