RNA–Protein interactions for RNA: ENST00000563759.1

LINC01960-201, Transcript of long intergenic non-protein coding RNA 1960, humanhuman

BASIC

Gene LINC01960, Length 1,884 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01960-201ENST00000563759 FAN1Q9Y2M0 1017 aa23.22■■□□□ 1.31
LINC01960-201ENST00000563759 SLC11A1P49279 550 aa23.22■■□□□ 1.31
LINC01960-201ENST00000563759 BCAT1P54687 386 aa23.22■■□□□ 1.31
LINC01960-201ENST00000563759 YWHAHQ04917 246 aaPredicted RBP23.22■■□□□ 1.31
LINC01960-201ENST00000563759 CPXM1Q96SM3 734 aa23.22■■□□□ 1.31
LINC01960-201ENST00000563759 PARVAQ9NVD7 372 aa23.22■■□□□ 1.31
LINC01960-201ENST00000563759 ANAPC7Q9UJX3 599 aa23.22■■□□□ 1.31
LINC01960-201ENST00000563759 BCAR1P56945 870 aa23.21■■□□□ 1.31
LINC01960-201ENST00000563759 BST2Q10589 180 aaKnown RBP23.21■■□□□ 1.31
LINC01960-201ENST00000563759 PPIGQ13427 754 aaKnown RBP eCLIP23.21■■□□□ 1.31
LINC01960-201ENST00000563759 CCDC142Q17RM4 750 aa23.21■■□□□ 1.31
LINC01960-201ENST00000563759 FAM117BQ6P1L5 589 aa23.21■■□□□ 1.31
LINC01960-201ENST00000563759 OTOP2Q7RTS6 562 aa23.21■■□□□ 1.31
LINC01960-201ENST00000563759 THEM5Q8N1Q8 247 aa23.21■■□□□ 1.31
LINC01960-201ENST00000563759 NLRC5Q86WI3 1866 aa23.21■■□□□ 1.31
LINC01960-201ENST00000563759 KIAA1671Q9BY89 1806 aa23.2■■□□□ 1.3
LINC01960-201ENST00000563759 NCK2O43639 380 aa23.2■■□□□ 1.3
LINC01960-201ENST00000563759 SETSIPP0DME0 302 aa23.2■■□□□ 1.3
LINC01960-201ENST00000563759 TKTP29401 623 aaKnown RBP23.2■■□□□ 1.3
LINC01960-201ENST00000563759 FPGSQ05932 587 aa23.2■■□□□ 1.3
LINC01960-201ENST00000563759 PTPROQ16827 1216 aa23.2■■□□□ 1.3
LINC01960-201ENST00000563759 PKDCCQ504Y2 493 aa23.2■■□□□ 1.3
LINC01960-201ENST00000563759 DNAJC24Q6P3W2 148 aa23.2■■□□□ 1.3
LINC01960-201ENST00000563759 PEX26Q7Z412 305 aa23.2■■□□□ 1.3
LINC01960-201ENST00000563759 TMCO2Q7Z6W1 182 aaPredicted RBP23.2■■□□□ 1.3
LINC01960-201ENST00000563759 ANKRD52Q8NB46 1076 aa23.2■■□□□ 1.3
LINC01960-201ENST00000563759 C18orf8Q96DM3 657 aa23.2■■□□□ 1.3
LINC01960-201ENST00000563759 ACBD6Q9BR61 282 aa23.2■■□□□ 1.3
LINC01960-201ENST00000563759 MED10Q9BTT4 135 aa23.2■■□□□ 1.3
LINC01960-201ENST00000563759 CRTAC1Q9NQ79 661 aa23.2■■□□□ 1.3
LINC01960-201ENST00000563759 SF3B1O75533 1304 aaKnown RBP eCLIP23.2■■□□□ 1.3
LINC01960-201ENST00000563759 TMEM110-MUSTN1A8MSY1 372 aa23.19■■□□□ 1.3
LINC01960-201ENST00000563759 PBX3P40426 434 aa23.19■■□□□ 1.3
LINC01960-201ENST00000563759 PDE4CQ08493 712 aa23.19■■□□□ 1.3
LINC01960-201ENST00000563759 MAMLD1Q13495 774 aa23.19■■□□□ 1.3
LINC01960-201ENST00000563759 MESDQ14696 234 aa23.19■■□□□ 1.3
LINC01960-201ENST00000563759 KIAA0319Q5VV43 1072 aa23.19■■□□□ 1.3
LINC01960-201ENST00000563759 PLEKHA7Q6IQ23 1121 aa23.19■■□□□ 1.3
LINC01960-201ENST00000563759 C11orf63Q6NUN7 778 aa23.19■■□□□ 1.3
LINC01960-201ENST00000563759 BADQ92934 168 aa23.19■■□□□ 1.3
LINC01960-201ENST00000563759 HNRNPABQ99729 332 aaKnown RBP23.19■■□□□ 1.3
LINC01960-201ENST00000563759 RTP3Q9BQQ7 232 aa23.19■■□□□ 1.3
LINC01960-201ENST00000563759 TJP2Q9UDY2 1190 aa23.19■■□□□ 1.3
LINC01960-201ENST00000563759 SAR1BQ9Y6B6 198 aa23.19■■□□□ 1.3
LINC01960-201ENST00000563759 ZBBXA8MT70 800 aa23.19■■□□□ 1.3
LINC01960-201ENST00000563759 ERBB2P04626 1255 aa23.19■■□□□ 1.3
LINC01960-201ENST00000563759 GALTP07902 379 aa23.19■■□□□ 1.3
LINC01960-201ENST00000563759 SLC8A3P57103 927 aa23.19■■□□□ 1.3
LINC01960-201ENST00000563759 MEI1Q5TIA1 1274 aa23.19■■□□□ 1.3
LINC01960-201ENST00000563759 PAPD7Q5XG87 772 aaKnown RBP23.19■■□□□ 1.3
LINC01960-201ENST00000563759 SLFN11Q7Z7L1 901 aa23.19■■□□□ 1.3
LINC01960-201ENST00000563759 FUKQ8N0W3 1084 aa23.19■■□□□ 1.3
LINC01960-201ENST00000563759 BTBD6Q96KE9 485 aa23.19■■□□□ 1.3
LINC01960-201ENST00000563759 MIS12Q9H081 205 aa23.19■■□□□ 1.3
LINC01960-201ENST00000563759 MARCH5Q9NX47 278 aa23.19■■□□□ 1.3
LINC01960-201ENST00000563759 PACSIN2Q9UNF0 486 aaPredicted RBP23.19■■□□□ 1.3
LINC01960-201ENST00000563759 ALDH7A1P49419 539 aaKnown RBP23.18■■□□□ 1.3
LINC01960-201ENST00000563759 RGS7P49802 495 aa23.18■■□□□ 1.3
LINC01960-201ENST00000563759 DNA2P51530 1060 aa23.18■■□□□ 1.3
LINC01960-201ENST00000563759 AMPD2Q01433 879 aa23.18■■□□□ 1.3
LINC01960-201ENST00000563759 TSPY1Q01534 308 aa23.18■■□□□ 1.3
LINC01960-201ENST00000563759 INTS6LQ5JSJ4 861 aaKnown RBP23.18■■□□□ 1.3
LINC01960-201ENST00000563759 C3orf20Q8ND61 904 aa23.18■■□□□ 1.3
LINC01960-201ENST00000563759 TLR10Q9BXR5 811 aa23.18■■□□□ 1.3
LINC01960-201ENST00000563759 WDR35Q9P2L0 1181 aa23.18■■□□□ 1.3
LINC01960-201ENST00000563759 MRFAP1Q9Y605 127 aa23.18■■□□□ 1.3
LINC01960-201ENST00000563759 MYBPHLA2RUH7 354 aa23.17■■□□□ 1.3
LINC01960-201ENST00000563759 NT5C1B-RDH14C9J2C7 533 aa23.17■■□□□ 1.3
LINC01960-201ENST00000563759 CLDN5O00501 218 aa23.17■■□□□ 1.3
LINC01960-201ENST00000563759 SYN3O14994 580 aa23.17■■□□□ 1.3
LINC01960-201ENST00000563759 CDR1P51861 262 aa23.17■■□□□ 1.3
LINC01960-201ENST00000563759 SPOUT1Q5T280 376 aaKnown RBP23.17■■□□□ 1.3
LINC01960-201ENST00000563759 FAM171A1Q5VUB5 890 aa23.17■■□□□ 1.3
LINC01960-201ENST00000563759 PMF1Q6P1K2 205 aa23.17■■□□□ 1.3
LINC01960-201ENST00000563759 MYCBPAPQ8TBZ2 947 aa23.17■■□□□ 1.3
LINC01960-201ENST00000563759 PCED1BQ96HM7 432 aa23.17■■□□□ 1.3
LINC01960-201ENST00000563759 SELENOOQ9BVL4 669 aa23.17■■□□□ 1.3
LINC01960-201ENST00000563759 L2HGDHQ9H9P8 463 aa23.17■■□□□ 1.3
LINC01960-201ENST00000563759 KRT82Q9NSB4 513 aa23.17■■□□□ 1.3
LINC01960-201ENST00000563759 AMFRQ9UKV5 643 aa23.17■■□□□ 1.3
LINC01960-201ENST00000563759 SNX12Q9UMY4 172 aa23.17■■□□□ 1.3
LINC01960-201ENST00000563759 HYOU1Q9Y4L1 999 aa23.17■■□□□ 1.3
LINC01960-201ENST00000563759 E5RJQ4 531 aa23.17■■□□□ 1.3
LINC01960-201ENST00000563759 GOLGA8SH3BPF8 625 aa23.17■■□□□ 1.3
LINC01960-201ENST00000563759 TULP2O00295 520 aa23.17■■□□□ 1.3
LINC01960-201ENST00000563759 RIOK3O14730 519 aaKnown RBP23.17■■□□□ 1.3
LINC01960-201ENST00000563759 SNX16P57768 344 aa23.17■■□□□ 1.3
LINC01960-201ENST00000563759 PLCB3Q01970 1234 aa23.17■■□□□ 1.3
LINC01960-201ENST00000563759 FUT10Q6P4F1 479 aa23.17■■□□□ 1.3
LINC01960-201ENST00000563759 DCUN1D2Q6PH85 259 aa23.17■■□□□ 1.3
LINC01960-201ENST00000563759 NT5DC3Q86UY8 548 aa23.17■■□□□ 1.3
LINC01960-201ENST00000563759 CEP57Q86XR8 500 aa23.17■■□□□ 1.3
LINC01960-201ENST00000563759 XYLT1Q86Y38 959 aa23.17■■□□□ 1.3
LINC01960-201ENST00000563759 OR10T2Q8NGX3 314 aa23.17■■□□□ 1.3
LINC01960-201ENST00000563759 SLC35F5Q8WV83 523 aa23.17■■□□□ 1.3
LINC01960-201ENST00000563759 MCEEQ96PE7 176 aa23.17■■□□□ 1.3
LINC01960-201ENST00000563759 PSMB7Q99436 277 aa23.17■■□□□ 1.3
LINC01960-201ENST00000563759 MYO1FO00160 1098 aa23.16■■□□□ 1.3
LINC01960-201ENST00000563759 PIK3R2O00459 728 aa23.16■■□□□ 1.3
LINC01960-201ENST00000563759 GJB6O95452 261 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms